DK952935 |
Clone id |
TST38A01NGRL0015_H02 |
Library |
TST38 |
Length |
559 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_H02. 5' end sequence. |
Accession |
DK952935 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL67Contig1 |
Sequence |
AGCGAAGTAGCATCCACGCTCTTGCGCTCTCTGCACAGAGAACTGCAAGATCCGTCGCCA TGTATACTGCTCGGAGGAAGATCCACAAGGAGAAGGGGCTGGAGCCAGATGATTTTGAGG AGTCCGTTGCTCAGGCTCTTTTCGATCTGGAGAACTCAAACCAGGAATTGAAGAGTGACC TGCGAGACCTTTTCATCAACTCTGCCAAGCAGGTTGATATTTCAGGAAGCCGGAAGGCTG TTATCATCCACGTGCCTTACAGGCTCTGCAAAGCCTTCCGAAAAATTCACTCTCGTCTTG TCCGGGAGTTGGAGAAGAAGTTCAGTGGGAAGGATGTTATTATGATTGCCACTAGACGTA TTTTGAGGCCTCCAAAGAAAGGGACGGCTGTAGCTCGCCCTCGTAATCGTACACTAACAG CTGTTCATGAAGCTATTCTCGAAGATTTGGTGTACCCGGCTGAGATTGTTGGAAAGCGAG TACGCTTCCGTCTGGATGGTTCAAGAATCATGCGGGTGTATTTAGATCCAAAGGAAAGGA ACAGCACTGAATACAAGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XET4 |
Definition |
sp|Q9XET4|RS7_SECCE 40S ribosomal protein S7 OS=Secale cereale |
Align length |
166 |
Score (bit) |
266.0 |
E-value |
4.0e-71 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S5I8 |
Definition |
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
165 |
Score (bit) |
289.0 |
E-value |
8.0e-77 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952935|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_H02, 5' (559 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella paten... 289 8e-77 tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella paten... 286 5e-76 tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella paten... 284 3e-75 tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella paten... 282 7e-75 tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea... 282 7e-75 tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 276 5e-73 tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 275 2e-72 tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 274 3e-72 tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subs... 271 2e-71 tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expre... 271 2e-71 tr|B4FZN6|B4FZN6_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 271 2e-71 tr|A2XFL9|A2XFL9_ORYSI Putative uncharacterized protein OS=Oryza... 271 2e-71 tr|A2XFL8|A2XFL8_ORYSI Putative uncharacterized protein OS=Oryza... 271 2e-71 tr|B8AX04|B8AX04_ORYSI Putative uncharacterized protein OS=Oryza... 269 9e-71 tr|Q5I7K2|Q5I7K2_WHEAT Ribosomal protein S7 OS=Triticum aestivum... 268 1e-70 tr|B7FMQ4|B7FMQ4_MEDTR Putative uncharacterized protein OS=Medic... 268 1e-70 tr|B6TE31|B6TE31_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 268 2e-70 tr|Q3HRX6|Q3HRX6_SOLTU Putative uncharacterized protein (40S rib... 267 2e-70 tr|A5AWN5|A5AWN5_VITVI Putative uncharacterized protein (Chromos... 267 2e-70 tr|B7FGT0|B7FGT0_MEDTR Putative uncharacterized protein OS=Medic... 267 3e-70 tr|Q0DIZ8|Q0DIZ8_ORYSJ Os05g0346300 protein OS=Oryza sativa subs... 266 4e-70 tr|A5AFQ8|A5AFQ8_VITVI Putative uncharacterized protein (Chromos... 266 4e-70 tr|A9PBS2|A9PBS2_POPTR Putative uncharacterized protein OS=Popul... 263 6e-69 tr|A9PCT6|A9PCT6_POPTR Putative uncharacterized protein OS=Popul... 262 8e-69 tr|A9PBB9|A9PBB9_POPTR Putative uncharacterized protein OS=Popul... 261 1e-68 tr|A9PEW2|A9PEW2_POPTR Putative uncharacterized protein OS=Popul... 261 2e-68 tr|Q1KUM0|Q1KUM0_9ROSI Putative uncharacterized protein OS=Cleom... 260 4e-68 tr|Q1KUR6|Q1KUR6_9ROSI Putative uncharacterized protein OS=Cleom... 259 5e-68 tr|A9PBV3|A9PBV3_POPTR Putative uncharacterized protein OS=Popul... 258 1e-67 tr|Q2EHP5|Q2EHP5_POPCA Putative 40S ribosomal protein S7 (Fragme... 258 2e-67
>tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208894 PE=4 SV=1 Length = 195
Score = 289 bits (739), Expect = 8e-77 Identities = 143/165 (86%), Positives = 160/165 (96%) Frame = +3
Query: 63 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 242 +TARRKI KEKG EPD+FEESVAQALFDLE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 243 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 422 +IHVPYRL KAF+KIH+RLVRELEKKFSGKDVI+IATRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 VIHVPYRLRKAFQKIHARLVRELEKKFSGKDVIVIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 423 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYK 557 VHEA+LEDLVYP+EIVGKRVR+RLDGSRIMRVYLDPKERNSTEYK Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNSTEYK 167
>tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_86905 PE=4 SV=1 Length = 195
Score = 286 bits (732), Expect = 5e-76 Identities = 141/165 (85%), Positives = 159/165 (96%) Frame = +3
Query: 63 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 242 +TARRKI KEKG EPD+FEESVAQALFDLE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 243 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 422 IIHVPYRL KAF+KIH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV RPR+RTLT Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVVIATRRILRPPKKGSAVNRPRSRTLTT 122
Query: 423 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYK 557 VHEA+LEDLVYP+EIVGKRVR+RLDGSRIMRVYLDPKERN+TEYK Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNTTEYK 167
>tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234408 PE=4 SV=1 Length = 195
Score = 284 bits (726), Expect = 3e-75 Identities = 140/165 (84%), Positives = 160/165 (96%) Frame = +3
Query: 63 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 242 +TARRKI KEKG EPD+FEESVAQALFDLE+++ ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTSSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 243 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 422 IIHVPYRL KAF+KIH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVIIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 423 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYK 557 VHEA+LEDLV+P+EIVGKRVR+RLDGSRIMRVYLDPKERN+TEYK Sbjct: 123 VHEAVLEDLVHPSEIVGKRVRYRLDGSRIMRVYLDPKERNTTEYK 167
>tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172596 PE=4 SV=1 Length = 195
Score = 282 bits (722), Expect = 7e-75 Identities = 139/165 (84%), Positives = 157/165 (95%) Frame = +3
Query: 63 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 242 +TARRKI KE G EPD+FEESVAQALFDLE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKENGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 243 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 422 IIHVP+RL KAF+KIH+RLVRELEKKFSGKDV+ I TRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 IIHVPFRLRKAFQKIHARLVRELEKKFSGKDVVFIVTRRILRPPKKGSAVNRPRSRTLTA 122
Query: 423 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYK 557 VHEA+LEDLVYP+EIVGKR+R+RLDGSRIMRVYLDPKERNSTEYK Sbjct: 123 VHEAVLEDLVYPSEIVGKRMRYRLDGSRIMRVYLDPKERNSTEYK 167
>tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 192
Score = 282 bits (722), Expect = 7e-75 Identities = 138/166 (83%), Positives = 157/166 (94%) Frame = +3
Query: 60 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 239 MYTARRKI KEK EP++FEESVAQALFDLE++NQELKS+L+DLFINSA Q DISG+RKA Sbjct: 1 MYTARRKIQKEKNAEPNEFEESVAQALFDLESTNQELKSELKDLFINSASQYDISGNRKA 60
Query: 240 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 419 V++HVPYRL KAFRKIH RLVRELEKKFSGKDV++IATRRI+RPPKKG+A RPR+RTLT Sbjct: 61 VVVHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVVIATRRIVRPPKKGSAAVRPRSRTLT 120
Query: 420 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYK 557 AVHEAILEDLVYPAEIVGKRVR+RLDGS+IM++YLDPKERN+TEYK Sbjct: 121 AVHEAILEDLVYPAEIVGKRVRYRLDGSKIMKIYLDPKERNNTEYK 166
>tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2 SV=1 Length = 192
Score = 276 bits (706), Expect = 5e-73 Identities = 132/166 (79%), Positives = 156/166 (93%) Frame = +3
Query: 60 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 239 MYTAR+KI KEKGLEP +FE+SVAQA FDLEN NQELKSDL+DL+IN+A Q+D++GSRKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSDLKDLYINNAIQMDVTGSRKA 60
Query: 240 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 419 V+IHVPYRL KAFRKIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVLRPRTRTLT 120
Query: 420 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYK 557 AVH+ ILED+VYPAEIVGKRVR+RLDGS+I++++LDPKERN+TEYK Sbjct: 121 AVHDGILEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYK 166
>tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 191
Score = 275 bits (702), Expect = 2e-72 Identities = 132/166 (79%), Positives = 156/166 (93%) Frame = +3
Query: 60 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 239 MYTAR+KI KEK +EP +FEE VAQALFDLEN+NQELKSDL+DL+INSA Q+D++G+RKA Sbjct: 1 MYTARKKIQKEKDVEPTEFEEIVAQALFDLENTNQELKSDLKDLYINSAVQIDVAGNRKA 60
Query: 240 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 419 V+IHVPYRL KAFRKIH RLVRE+EKKFSGKDVI IATRRILRPPKKG+AV RPR+RTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVREMEKKFSGKDVIFIATRRILRPPKKGSAVVRPRSRTLT 120
Query: 420 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYK 557 VHEA+LED+VYPAEIVGKR+R+RLDGS+I++++LDPKERN+TEYK Sbjct: 121 HVHEAMLEDIVYPAEIVGKRIRYRLDGSKIIKIFLDPKERNNTEYK 166
>tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 189
Score = 274 bits (700), Expect = 3e-72 Identities = 130/166 (78%), Positives = 157/166 (94%) Frame = +3
Query: 60 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 239 M+TAR+KI K+K LEP +FEESVAQALFDLEN+NQELKSDLRDL+INSA Q+D++G+RKA Sbjct: 1 MFTARKKIQKDKDLEPSEFEESVAQALFDLENNNQELKSDLRDLYINSAVQMDVAGNRKA 60
Query: 240 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 419 V+IH+PYRL KA+RKIH RLVRELEKKFSGKDVI+IATRRILRPPKKG+A+ RPR+RTLT Sbjct: 61 VVIHIPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAIVRPRSRTLT 120
Query: 420 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYK 557 AVH+A LED+VYPAEIVGKR+R+ LDGS+I++++LDPKERN+TEYK Sbjct: 121 AVHDATLEDVVYPAEIVGKRIRYHLDGSKIIKIFLDPKERNTTEYK 166
>tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subsp. japonica GN=Os03g0297100 PE=2 SV=1 Length = 192
Score = 271 bits (693), Expect = 2e-71 Identities = 127/166 (76%), Positives = 156/166 (93%) Frame = +3
Query: 60 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 239 MYTAR+KI KEKGLEP +FE+SVAQA FDLEN NQELKS+L+DL+IN+A Q+DI+G+RKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 240 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 419 V+IHVPYRL KAF+KIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 420 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYK 557 AVH+ ILED+VYPAEIVGKR+R+RLDG+++++++LDPKERN+TEYK Sbjct: 121 AVHDGILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYK 166
>tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expressed (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=LOC_Os03g18580 PE=4 SV=1 Length = 192
Score = 271 bits (693), Expect = 2e-71 Identities = 127/166 (76%), Positives = 156/166 (93%) Frame = +3
Query: 60 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 239 MYTAR+KI KEKGLEP +FE+SVAQA FDLEN NQELKS+L+DL+IN+A Q+DI+G+RKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 240 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 419 V+IHVPYRL KAF+KIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 420 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYK 557 AVH+ ILED+VYPAEIVGKR+R+RLDG+++++++LDPKERN+TEYK Sbjct: 121 AVHDCILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYK 166
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