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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952951
Clone id TST38A01NGRL0015_H18
Library
Length 561
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_H18. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
AATTCTGGGGCGAGCAAGGATGGGAGATCTATAATGAGGTAAGCTTATGAAGTCGACTAG
CTGACAAGGAGGAACGGGAAGGGGGGTTTGGGGACTCTTGAAGGTAACCCATGGCATCAT
CATCTGTAGAGTCGGAGCAGGATCCAGAGCCTGATGAGCCTACATTCCGATTCGATCAAA
ACAATACGTCATCTCAGAGTCTTCTCAGTGGAGGTGGTTCAGGTTATGAAAGCCAATATG
GAAGCTTGTTTGGAAGTAGGTTCAGTTTAACAGATGGATCTGGGATCTTCATATCGTCAC
TTGCCTTGACTATCATTATTTCAGCAATTGCTGTTGTAGGCATTGTCCTTGTTGCAGCGA
TAATCACGCTTGCAGTGATGCTATCGTCTTGTGGGCAAAACTCGACTGTGAATGTACAGT
TTAAAAGGTCTGCTGATTTCTGCTCCAGCTTTCGCTTGAACATTGAACTAAACAACATGC
AAGGAAGGGCACTTCCTGGAACATGTGATGCAGAGATCTTTGAGTATGTTCATGGGGGGC
AATACATAAAGGATGTGGAAA
■■Homology search results ■■ -
sp_hit_id P15490
Definition sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max
Align length 39
Score (bit) 33.9
E-value 0.56
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952951|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_H18, 5'
         (561 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max GN=...    34   0.56 
sp|P10742|S25K_SOYBN Stem 31 kDa glycoprotein (Fragment) OS=Glyc...    34   0.56 
sp|Q9YMV2|DNLI_NPVLD DNA ligase OS=Lymantria dispar multicapsid ...    31   3.7  
sp|Q9D9B7|CB053_MOUSE Uncharacterized protein C2orf53 homolog OS...    31   3.7  
sp|P10743|VSPB_SOYBN Stem 31 kDa glycoprotein OS=Glycine max GN=...    30   6.2  
sp|Q3UH66|WNK2_MOUSE Serine/threonine-protein kinase WNK2 OS=Mus...    30   6.3  
sp|A1A4L1|THEM4_BOVIN Thioesterase superfamily member 4 OS=Bos t...    30   8.1  

>sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max
           GN=VSPA PE=2 SV=1
          Length = 254

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 441 CSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKD 554
           C+S+RL +E +N+ G   +P  C     EY+HG QY  D
Sbjct: 42  CASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSD 80


>sp|P10742|S25K_SOYBN Stem 31 kDa glycoprotein (Fragment) OS=Glycine
           max GN=VSP25 PE=2 SV=2
          Length = 291

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 441 CSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKD 554
           C+S+RL +E +N+ G   +P  C     EY+HG QY  D
Sbjct: 39  CASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSD 77


>sp|Q9YMV2|DNLI_NPVLD DNA ligase OS=Lymantria dispar multicapsid
           nuclear polyhedrosis virus GN=LIG PE=1 SV=1
          Length = 548

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = -1

Query: 201 DSEMTYCFDRIGM*AHQALDPAPTLQMMMPWVTFKSPQTPLPVPPCQLVDFISLPH 34
           D ++   F  +   AH  L     ++++ PW  F+ P  P    PC+ +  + + H
Sbjct: 134 DEDLLTVFRVVSDHAHAGLSAEDVMELVEPWERFQKPVPPALAQPCRRLASVLVKH 189


>sp|Q9D9B7|CB053_MOUSE Uncharacterized protein C2orf53 homolog
           OS=Mus musculus PE=2 SV=1
          Length = 401

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 18/40 (45%), Positives = 19/40 (47%)
 Frame = -1

Query: 141 PAPTLQMMMPWVTFKSPQTPLPVPPCQLVDFISLPHYRSP 22
           PAP L  + P  T  S   PLP PP Q   F SL    SP
Sbjct: 31  PAPNLASLCPHPTLPSSHFPLPAPP-QAYFFSSLTQTHSP 69


>sp|P10743|VSPB_SOYBN Stem 31 kDa glycoprotein OS=Glycine max
           GN=VSPB PE=2 SV=1
          Length = 254

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +3

Query: 441 CSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKD 554
           C+SFRL +E +N++  + +P  C     +Y++G Q+  D
Sbjct: 43  CASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSD 81


>sp|Q3UH66|WNK2_MOUSE Serine/threonine-protein kinase WNK2 OS=Mus
           musculus GN=Wnk2 PE=2 SV=2
          Length = 2149

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 17/45 (37%), Positives = 19/45 (42%)
 Frame = -1

Query: 141 PAPTLQMMMPWVTFKSPQTPLPVPPCQLVDFISLPHYRSPILARP 7
           P P  Q   P V   S  TPLP  P   +  + LPH     LA P
Sbjct: 827 PVPPPQYFSPAVILPSLTTPLPTSPALPMQAVKLPHPPGTPLAVP 871


>sp|A1A4L1|THEM4_BOVIN Thioesterase superfamily member 4 OS=Bos
           taurus GN=THEM4 PE=2 SV=1
          Length = 237

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 402 STVNVQFKRSADFCSSFRLNIELNNMQGRALPGTCD 509
           + +N+ FKR    CS   +N +L+ ++GR L  +C+
Sbjct: 175 ANLNINFKRPVPLCSVVVINSQLDKLEGRKLFLSCN 210
tr_hit_id A9ST51
Definition tr|A9ST51|A9ST51_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 46
Score (bit) 45.1
E-value 0.003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952951|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_H18, 5'
         (561 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9ST51|A9ST51_PHYPA Predicted protein OS=Physcomitrella paten...    45   0.003
tr|A9TX97|A9TX97_PHYPA Predicted protein OS=Physcomitrella paten...    45   0.003
tr|A2Q4U2|A2Q4U2_MEDTR Putative uncharacterized protein OS=Medic...    41   0.050
tr|A7PIC9|A7PIC9_VITVI Chromosome chr13 scaffold_17, whole genom...    40   0.086
tr|B7FL33|B7FL33_MEDTR Putative uncharacterized protein OS=Medic...    40   0.11 
tr|Q9M0F4|Q9M0F4_ARATH Acid phosphatase-like protein (At4g29270)...    38   0.33 
tr|Q6QWF7|Q6QWF7_GLYTO Vegetative storage protein OS=Glycine tom...    38   0.43 
tr|Q9LG77|Q9LG77_ORYSJ cDNA clone:006-301-D10, full insert seque...    37   0.56 
tr|A7Q1M1|A7Q1M1_VITVI Chromosome chr7 scaffold_44, whole genome...    37   0.56 
tr|A5C9Z6|A5C9Z6_VITVI Putative uncharacterized protein (Chromos...    37   0.56 
tr|A2ZQ66|A2ZQ66_ORYSJ Putative uncharacterized protein OS=Oryza...    37   0.56 
tr|A2WLL0|A2WLL0_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.56 
tr|Q6QWF8|Q6QWF8_9FABA Vegetative storage protein OS=Glycine fal...    37   0.73 
tr|Q9ZWC4|Q9ZWC4_ARATH F21M11.2 protein (At1g04040/F21M11_2) (Si...    35   2.8  
tr|Q9FNC4|Q9FNC4_ARATH Vegetative storage protein-like OS=Arabid...    35   2.8  
tr|Q8LC74|Q8LC74_ARATH Vegetative storage protein-like OS=Arabid...    35   2.8  
tr|A9T054|A9T054_PHYPA Predicted protein OS=Physcomitrella paten...    35   3.6  
tr|A9PBL1|A9PBL1_POPTR Putative uncharacterized protein OS=Popul...    35   3.6  
tr|Q9ZVI2|Q9ZVI2_ARATH Putative acid phosphatase OS=Arabidopsis ...    34   6.2  
tr|A8X028|A8X028_CAEBR Putative uncharacterized protein OS=Caeno...    34   6.3  

>tr|A9ST51|A9ST51_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_134967 PE=4 SV=1
          Length = 228

 Score = 45.1 bits (105), Expect = 0.003
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = +3

Query: 417 QFKRSADFCSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYIKD 554
           Q K  ++ C+SF  N E+NN+QG  LP  C+  +  YV+ GQY  D
Sbjct: 6   QKKPLSNACASFAFNTEMNNLQGYLLPQECEGYVAGYVNSGQYHSD 51


>tr|A9TX97|A9TX97_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_152209 PE=4 SV=1
          Length = 225

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 21/46 (45%), Positives = 27/46 (58%)
 Frame = +3

Query: 417 QFKRSADFCSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYIKD 554
           Q K  ++ C+SF LN E NN+QG  LP  C+  +  YV  GQY  D
Sbjct: 6   QKKPVSNSCASFSLNAETNNLQGYLLPQECEGFVAGYVGSGQYYSD 51


>tr|A2Q4U2|A2Q4U2_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula GN=MtrDRAFT_AC157891g13v2 PE=4 SV=1
          Length = 141

 Score = 40.8 bits (94), Expect = 0.050
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +3

Query: 378 MLSSCGQNSTVNVQFKRSAD---FCSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYI 548
           ML SC  ++   ++ +   D   +C    L+ +LNN++   +P  C     +Y+ GGQY+
Sbjct: 54  MLQSCQNSNGGVIELRNINDDYSYCKIHSLHAKLNNLEEYNVPNICKDLALQYIKGGQYV 113

Query: 549 KDVE 560
           +D++
Sbjct: 114 RDLD 117


>tr|A7PIC9|A7PIC9_VITVI Chromosome chr13 scaffold_17, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018293001
           PE=4 SV=1
          Length = 306

 Score = 40.0 bits (92), Expect = 0.086
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +3

Query: 378 MLSSCGQNSTVNVQFKRSADF---CSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYI 548
           ML SC    +  V   +S+D+   C  F L+ E+N+++    P  C     +Y+  GQY 
Sbjct: 67  MLQSCQIERSGAVDSSKSSDYYSYCKIFTLHAEINSLEVNEFPSVCKDFAIQYIKEGQYA 126

Query: 549 KD 554
           KD
Sbjct: 127 KD 128


>tr|B7FL33|B7FL33_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 297

 Score = 39.7 bits (91), Expect = 0.11
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = +3

Query: 378 MLSSCGQNSTVNVQFKRSAD----FCSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQY 545
           ML SC QNS   +   R+ +    +C    L+ +LNN++   +P  C     +Y+ GGQY
Sbjct: 62  MLQSC-QNSNGGIIELRNINNDYSYCKIHSLHAKLNNLEEHNVPNICKDLALQYIKGGQY 120

Query: 546 IKDVE 560
            +D++
Sbjct: 121 ARDLD 125


>tr|Q9M0F4|Q9M0F4_ARATH Acid phosphatase-like protein (At4g29270)
           OS=Arabidopsis thaliana GN=At4g29270 PE=2 SV=1
          Length = 256

 Score = 38.1 bits (87), Expect = 0.33
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +3

Query: 432 ADFCSSFRLNIELNNM-QGRALPGTCDAEIFEYVHGGQYIKDVE 560
           A +C S+RL  E NN+   + +P  C+  I  Y++GGQ+ KD +
Sbjct: 41  ASYCESWRLAAETNNVGPWKVIPSQCENYIKNYINGGQFDKDYD 84


>tr|Q6QWF7|Q6QWF7_GLYTO Vegetative storage protein OS=Glycine
           tomentella GN=VSPa PE=2 SV=1
          Length = 253

 Score = 37.7 bits (86), Expect = 0.43
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +3

Query: 441 CSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKD 554
           C+S+RL +E  N+ G + +P  C     EY+HGGQY  D
Sbjct: 42  CASWRLAVEAQNIFGFKTIPEECVESTKEYIHGGQYESD 80


>tr|Q9LG77|Q9LG77_ORYSJ cDNA clone:006-301-D10, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0710E05.30 PE=2 SV=1
          Length = 303

 Score = 37.4 bits (85), Expect = 0.56
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 435 DFCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKD 554
           D+C S+R+ +E NN++G  A P  CD  +  Y+ G  Y +D
Sbjct: 57  DYCDSWRVGVEANNVRGWTAAPRKCDNYVENYMRGHHYRRD 97


>tr|A7Q1M1|A7Q1M1_VITVI Chromosome chr7 scaffold_44, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028521001
           PE=4 SV=1
          Length = 295

 Score = 37.4 bits (85), Expect = 0.56
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 435 DFCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVE 560
           ++C S+R+N+ELNN++G   +P  C   + +Y+   QY  D+E
Sbjct: 79  NYCESWRINVELNNIKGFDVVPQECVEFVGKYMTSSQYKADIE 121


>tr|A5C9Z6|A5C9Z6_VITVI Putative uncharacterized protein (Chromosome
           chr8 scaffold_68, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00033659001 PE=4 SV=1
          Length = 251

 Score = 37.4 bits (85), Expect = 0.56
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +3

Query: 438 FCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDV 557
           +C S+R+++E NNM G R +P  C   I  Y+ GGQY +D+
Sbjct: 37  YCLSWRMSVEANNMAGWRTVPMQCLPYIQGYMIGGQYDRDM 77