DK952955
Clone id TST38A01NGRL0015_H22
Library
Length 553
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_H22. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CAAGGGCTATAGCTCAGCGGTAGAGCGCCTCGCTTACACGTGCGCCGACGTTTTTTTGGA
AGATTGGTCGAAACCCAACGACTCATGCAAAAACAAGACAATGCATGACCTATCTCTGCC
TTACTTTTTTTTTTCCACAAAGGAACAGTAGCATGACAGACAAATCAATTGCAAATCGAT
TTCAGAAAGTTGATATGGTGGATAATTGGTTTCTCCAATGCTACAAATGGTTGGACAATG
TGAGGACCACACGAAATCTCTTCCTCGTTTCACGAACTTTCGGGTGTAGGAGGTTTCGCG
AAGCTAGCTTCTCCAAGCGACAGAGACTATTTAGGCTTGCGAGCTGGATTTCTGCCCAGC
AGAGACAAACCTGTGTCAACACATAACTTATAATCTTATCAAAATACTTCGGGATTGCTT
AATTCAGTTCTTATTCATCATGTAGTTCTTCCCAATTTTCTAATTTGAAGGAATATCTGT
AAAAGAAAAGGATTAATCGAGCATCCGGAACCATCTCTCCTCACTTATCTGTGAAACGAA
GGTTGGTATATCA
■■Homology search results ■■ -
sp_hit_id Q00416
Definition sp|Q00416|SEN1_YEAST Helicase SEN1 OS=Saccharomyces cerevisiae
Align length 67
Score (bit) 32.7
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952955|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_H22, 5'
(553 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q00416|SEN1_YEAST Helicase SEN1 OS=Saccharomyces cerevisiae G... 33 1.2
sp|Q2JW78|DNAJ_SYNJA Chaperone protein dnaJ OS=Synechococcus sp.... 30 6.0

>sp|Q00416|SEN1_YEAST Helicase SEN1 OS=Saccharomyces cerevisiae
GN=SEN1 PE=1 SV=2
Length = 2231

Score = 32.7 bits (73), Expect = 1.2
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 11/67 (16%)
Frame = +3

Query: 15 QR*SASLTRAPTFFWKIG-----------RNPTTHAKTRQCMTYLCLTFFFPQRNSSMTD 161
+R + +LTRA T W +G R+ AK R C+ Y C F P+ N +
Sbjct: 1812 RRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNNRA--- 1868

Query: 162 KSIANRF 182
+SI +F
Sbjct: 1869 QSILRKF 1875


>sp|Q2JW78|DNAJ_SYNJA Chaperone protein dnaJ OS=Synechococcus sp.
(strain JA-3-3Ab) GN=dnaJ PE=3 SV=1
Length = 394

Score = 30.4 bits (67), Expect = 6.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1

Query: 244 GPHEISSSFHELSGVGGFAKLASPSDRDYLGLRAGFLPSRDKPVSTHNL 390
G +S F + +G+GGFA L ++ G G+ SR PV +L
Sbjct: 74 GAAAAASGFQDFAGIGGFADLFESFFTNFAGGGVGYSRSRQGPVRGDDL 122


tr_hit_id Q7PNY4
Definition tr|Q7PNY4|Q7PNY4_ANOGA Candidate odorant receptor (AGAP006666-PA) OS=Anopheles gambiae
Align length 67
Score (bit) 33.9
E-value 5.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952955|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_H22, 5'
(553 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7PNY4|Q7PNY4_ANOGA Candidate odorant receptor (AGAP006666-PA... 34 5.9
tr|Q0C475|Q0C475_HYPNA Conserved domain protein OS=Hyphomonas ne... 33 7.8

>tr|Q7PNY4|Q7PNY4_ANOGA Candidate odorant receptor (AGAP006666-PA)
OS=Anopheles gambiae GN=GPROR48 PE=3 SV=1
Length = 397

Score = 33.9 bits (76), Expect = 5.9
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3

Query: 102 CMTYLCLTFFFPQRNSSMTDKSIANRFQKVDMVDNWFLQCYKWLDNVRTTRNLFLVSRTF 281
C+ LCL F+ RN S+ +IA + + + C+ +L N T N + F
Sbjct: 283 CLLMLCLMLFYITRNHSLNVINIAVLLMSIFIE----MMCFSYLGNQLTEENANISHSAF 338

Query: 282 GCRRFRE 302
CR + E
Sbjct: 339 NCRWYDE 345


>tr|Q0C475|Q0C475_HYPNA Conserved domain protein OS=Hyphomonas
neptunium (strain ATCC 15444) GN=HNE_0740 PE=4 SV=1
Length = 166

Score = 33.5 bits (75), Expect = 7.8
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1

Query: 412 GLLNSVLIHHVVLPNFLI*RNICKRKGLIEHPEP 513
G LN VL H +LP+ + R + K GLI+HP+P
Sbjct: 129 GQLNQVLCHDELLPSRRMLRPVQKDAGLIQHPKP 162