DK952959 |
Clone id |
TST38A01NGRL0015_I02 |
Library |
TST38 |
Length |
580 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_I02. 5' end sequence. |
Accession |
DK952959 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3080Contig1 |
Sequence |
GGACTGTCTCATGTTAGATTTTCTTCTAGCTAGATCTGTTCTGTATCGGCGATGGCAACC TCTCGGCTGGCGGCCCTTTGGAACCATCCTGCCGGTCCTAAAACAATCCACTTTTGGGCG CCAACTTTTAAATGGGGCATCAGTATAGCGAATGTTGCTGATTTTGCCAAGCCACCAGAA AAGATATCGTATCCGCAGCAAATTGCTGTGACTGCTACAGGAGTGATTTGGTCTCGATAT AGCACTGTCATTACGCCGAAAAACTGGAATCTTTTCAGCGTGAATGTAGCTATGGCTGCC ACCGGAATTTATCAACTATCAAGGAAAGTCATGCATGATTACTCATCTGATGCTGGCAGC AAAGTTTTGGAAGAGCATCATTGACTAACTGCAGAATATATACGATGATGACGAAACCAC AGCTATTTCCAGTGTTTCACCTCTATATGCAAGAGGGTGTATATTTTGCCACCCGCTGGT TCTCTCAAATAATTTATCAACGAGTGCTGTGAGCTGAATTCATGGGGATAAATTAAAAGC ACTTGTTTCTTTTCATCGAGCATTATATCTCAGTGTCCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O95563 |
Definition |
sp|O95563|BR44_HUMAN Brain protein 44 OS=Homo sapiens |
Align length |
94 |
Score (bit) |
111.0 |
E-value |
2.0e-24 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PAU1 |
Definition |
tr|A9PAU1|A9PAU1_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
108 |
Score (bit) |
201.0 |
E-value |
2.0e-50 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952959|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_I02, 5' (580 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PAU1|A9PAU1_POPTR Putative uncharacterized protein OS=Popul... 201 2e-50 tr|O49636|O49636_ARATH Putative uncharacterized protein AT4g2231... 194 4e-48 tr|A7R105|A7R105_VITVI Chromosome undetermined scaffold_332, who... 193 7e-48 tr|Q2HVG1|Q2HVG1_MEDTR Putative uncharacterized protein OS=Medic... 192 1e-47 tr|Q8LB46|Q8LB46_ARATH Light induced protein like OS=Arabidopsis... 188 2e-46 tr|Q8LD38|Q8LD38_ARATH Putative uncharacterized protein OS=Arabi... 186 6e-46 tr|B4FWA7|B4FWA7_MAIZE Brain protein 44 OS=Zea mays PE=4 SV=1 185 1e-45 tr|Q7XIT4|Q7XIT4_ORYSJ Os07g0449100 protein OS=Oryza sativa subs... 184 4e-45 tr|Q6ZB58|Q6ZB58_ORYSJ Os08g0344300 protein OS=Oryza sativa subs... 184 4e-45 tr|A2YKV5|A2YKV5_ORYSI Putative uncharacterized protein OS=Oryza... 184 4e-45 tr|Q8L7H8|Q8L7H8_ARATH Putative light induced protein OS=Arabido... 183 5e-45 tr|O23325|O23325_ARATH Light induced protein like OS=Arabidopsis... 183 5e-45 tr|B6SM59|B6SM59_MAIZE Brain protein 44 OS=Zea mays PE=4 SV=1 183 5e-45 tr|A9NZK0|A9NZK0_PICSI Putative uncharacterized protein OS=Picea... 183 5e-45 tr|A9NKG9|A9NKG9_PICSI Putative uncharacterized protein OS=Picea... 183 7e-45 tr|B6U833|B6U833_MAIZE Brain protein 44 OS=Zea mays PE=4 SV=1 182 1e-44 tr|Q7XY22|Q7XY22_WHEAT Probable light-induced protein OS=Triticu... 181 3e-44 tr|A9SKH0|A9SKH0_PHYPA Predicted protein OS=Physcomitrella paten... 179 1e-43 tr|B8B791|B8B791_ORYSI Putative uncharacterized protein OS=Oryza... 171 3e-41 tr|A3BL07|A3BL07_ORYSJ Putative uncharacterized protein OS=Oryza... 170 5e-41 tr|Q84VZ9|Q84VZ9_ARATH At4g05590 (Putative uncharacterized prote... 167 3e-40 tr|A7P0K0|A7P0K0_VITVI Chromosome chr19 scaffold_4, whole genome... 164 3e-39 tr|A9TN57|A9TN57_PHYPA Predicted protein OS=Physcomitrella paten... 162 2e-38 tr|A7P0K1|A7P0K1_VITVI Chromosome chr19 scaffold_4, whole genome... 160 5e-38 tr|A5BCM7|A5BCM7_VITVI Putative uncharacterized protein OS=Vitis... 160 5e-38 tr|A7PXB6|A7PXB6_VITVI Chromosome chr12 scaffold_36, whole genom... 159 1e-37 tr|A2YU79|A2YU79_ORYSI Putative uncharacterized protein OS=Oryza... 156 9e-37 tr|Q2HVG0|Q2HVG0_MEDTR Putative uncharacterized protein OS=Medic... 155 1e-36 tr|A3BS63|A3BS63_ORYSJ Putative uncharacterized protein OS=Oryza... 155 1e-36 tr|A8IAZ4|A8IAZ4_CHLRE Predicted protein OS=Chlamydomonas reinha... 145 2e-33
>tr|A9PAU1|A9PAU1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 108
Score = 201 bits (511), Expect = 2e-50 Identities = 93/108 (86%), Positives = 100/108 (92%) Frame = +1
Query: 52 MATSRLAALWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQIAVTATGVIW 231 MATS+L ALWNHPAGPKTIHFWAPTFKWGISIAN+ADFAKPPEK+SYPQQIAVT TGVIW Sbjct: 1 MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60
Query: 232 SRYSTVITPKNWNLFSVNVAMAATGIYQLSRKVMHDYSSDAGSKVLEE 375 SRYSTVITPKNWNLFSVNVAMAATGIYQLSRK+ HDY S+ + V +E Sbjct: 61 SRYSTVITPKNWNLFSVNVAMAATGIYQLSRKIQHDYFSEEEAAVAKE 108
>tr|O49636|O49636_ARATH Putative uncharacterized protein AT4g22310 (AT4g22310) OS=Arabidopsis thaliana GN=AT4g22310 PE=4 SV=1 Length = 108
Score = 194 bits (492), Expect = 4e-48 Identities = 88/108 (81%), Positives = 97/108 (89%) Frame = +1
Query: 52 MATSRLAALWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQIAVTATGVIW 231 MATS+L A+WNHPAGPKTIHFWAPTFKWGISIAN+ADFAKPPEK+SYPQQIAVT TGVIW Sbjct: 1 MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60
Query: 232 SRYSTVITPKNWNLFSVNVAMAATGIYQLSRKVMHDYSSDAGSKVLEE 375 SRYS VI PKNWNLFSVNVAMA TGIYQL+RK+ HDY+++A V E Sbjct: 61 SRYSMVINPKNWNLFSVNVAMAGTGIYQLARKIKHDYATEAEPAVASE 108
>tr|A7R105|A7R105_VITVI Chromosome undetermined scaffold_332, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011725001 PE=4 SV=1 Length = 108
Score = 193 bits (490), Expect = 7e-48 Identities = 89/108 (82%), Positives = 95/108 (87%) Frame = +1
Query: 52 MATSRLAALWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQIAVTATGVIW 231 MA S+L A WNHPAGPKTIHFWAPTFKWGISIANVADF KPPEK+SYPQQIAVT TGVIW Sbjct: 1 MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANVADFTKPPEKLSYPQQIAVTCTGVIW 60
Query: 232 SRYSTVITPKNWNLFSVNVAMAATGIYQLSRKVMHDYSSDAGSKVLEE 375 +RYSTVITPKNWNLFSVNVAMA TGIYQLSRK+ HDY + + V EE Sbjct: 61 TRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIKHDYFPEPEAAVAEE 108
>tr|Q2HVG1|Q2HVG1_MEDTR Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC148915g4v2 PE=4 SV=1 Length = 106
Score = 192 bits (488), Expect = 1e-47 Identities = 87/100 (87%), Positives = 95/100 (95%) Frame = +1
Query: 52 MATSRLAALWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQIAVTATGVIW 231 MATS+L A WNHPAGPKTIHFWAPTFKWGISIAN+ADFAKPPEK+SYPQQIAVTATG+IW Sbjct: 1 MATSKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTATGLIW 60
Query: 232 SRYSTVITPKNWNLFSVNVAMAATGIYQLSRKVMHDYSSD 351 SRYSTVITPKNWNLF+VNVAMA TG+YQLSRK+ DYSS+ Sbjct: 61 SRYSTVITPKNWNLFAVNVAMAGTGLYQLSRKLRQDYSSE 100
>tr|Q8LB46|Q8LB46_ARATH Light induced protein like OS=Arabidopsis thaliana PE=4 SV=1 Length = 108
Score = 188 bits (478), Expect = 2e-46 Identities = 87/108 (80%), Positives = 96/108 (88%) Frame = +1
Query: 52 MATSRLAALWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQIAVTATGVIW 231 MATS+L A+WNHPAGPKTIHFWAPTFKWGISIAN+ADFAKPPEK+SYPQQIAVT TGVIW Sbjct: 1 MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60
Query: 232 SRYSTVITPKNWNLFSVNVAMAATGIYQLSRKVMHDYSSDAGSKVLEE 375 SRYS VI PKN NLFSVNVAMA TGIYQL+RK+ HDY+++A V E Sbjct: 61 SRYSMVINPKNSNLFSVNVAMAGTGIYQLARKIKHDYATEAEPAVASE 108
>tr|Q8LD38|Q8LD38_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 108
Score = 186 bits (473), Expect = 6e-46 Identities = 83/108 (76%), Positives = 95/108 (87%) Frame = +1
Query: 52 MATSRLAALWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQIAVTATGVIW 231 MATS+L ALWNHPAGPKTIHFWAPTFKWGISIAN+ADF KPPE +SYPQQI +T TG++W Sbjct: 1 MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIVITGTGLVW 60
Query: 232 SRYSTVITPKNWNLFSVNVAMAATGIYQLSRKVMHDYSSDAGSKVLEE 375 SRYSTVITPKNWNLFSV++ MA TGIYQL+RK+ HDY +A S V +E Sbjct: 61 SRYSTVITPKNWNLFSVSLGMAVTGIYQLTRKIKHDYVYEANSIVAKE 108
>tr|B4FWA7|B4FWA7_MAIZE Brain protein 44 OS=Zea mays PE=4 SV=1 Length = 110
Score = 185 bits (470), Expect = 1e-45 Identities = 83/100 (83%), Positives = 91/100 (91%) Frame = +1
Query: 52 MATSRLAALWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQIAVTATGVIW 231 MA ++L ALWNHPAGPKTIHFWAPTFKWGISIAN+ADFAKPPEKISYPQQ+AV TG+IW Sbjct: 1 MAATKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQVAVACTGLIW 60
Query: 232 SRYSTVITPKNWNLFSVNVAMAATGIYQLSRKVMHDYSSD 351 SRYS VITP+NWNLFSVNVAMA TG+YQLSRK+ DY SD Sbjct: 61 SRYSLVITPRNWNLFSVNVAMAGTGLYQLSRKIRQDYLSD 100
>tr|Q7XIT4|Q7XIT4_ORYSJ Os07g0449100 protein OS=Oryza sativa subsp. japonica GN=OJ1047_A06.120 PE=4 SV=1 Length = 109
Score = 184 bits (466), Expect = 4e-45 Identities = 84/97 (86%), Positives = 88/97 (90%) Frame = +1
Query: 61 SRLAALWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQIAVTATGVIWSRY 240 S+L A WNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQ+AV TGVIWSRY Sbjct: 3 SKLQAFWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQVAVACTGVIWSRY 62
Query: 241 STVITPKNWNLFSVNVAMAATGIYQLSRKVMHDYSSD 351 S VITPKNWNLFSVNVAMA TG+YQLSRK+ DY SD Sbjct: 63 SMVITPKNWNLFSVNVAMAGTGLYQLSRKIRKDYFSD 99
>tr|Q6ZB58|Q6ZB58_ORYSJ Os08g0344300 protein OS=Oryza sativa subsp. japonica GN=OJ1119_B10.31 PE=4 SV=1 Length = 109
Score = 184 bits (466), Expect = 4e-45 Identities = 84/97 (86%), Positives = 88/97 (90%) Frame = +1
Query: 61 SRLAALWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQIAVTATGVIWSRY 240 S+L A WNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQ+AV TGVIWSRY Sbjct: 3 SKLQAFWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQVAVACTGVIWSRY 62
Query: 241 STVITPKNWNLFSVNVAMAATGIYQLSRKVMHDYSSD 351 S VITPKNWNLFSVNVAMA TG+YQLSRK+ DY SD Sbjct: 63 SMVITPKNWNLFSVNVAMAGTGLYQLSRKIRKDYFSD 99
>tr|A2YKV5|A2YKV5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25849 PE=4 SV=1 Length = 109
Score = 184 bits (466), Expect = 4e-45 Identities = 84/97 (86%), Positives = 88/97 (90%) Frame = +1
Query: 61 SRLAALWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQIAVTATGVIWSRY 240 S+L A WNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQ+AV TGVIWSRY Sbjct: 3 SKLQAFWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKISYPQQVAVACTGVIWSRY 62
Query: 241 STVITPKNWNLFSVNVAMAATGIYQLSRKVMHDYSSD 351 S VITPKNWNLFSVNVAMA TG+YQLSRK+ DY SD Sbjct: 63 SMVITPKNWNLFSVNVAMAGTGLYQLSRKIRKDYFSD 99
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