DK952969
Clone id TST38A01NGRL0015_I12
Library
Length 453
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_I12. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CATCCATATCGAATCAGAAGAGGAAGTGGGAACAGCTTCCAGATGGCTGAGTTCGGAAAT
ACATTTTATATATGATGGGTGGGATTAAAATCAAGCGGTAACCCACCTGCACATCATGCA
ACAAGGAAGTTTTGACACTAAGAAATCCAGGTTTCTTTCATGGCAAAGAGGGGGAGATGT
ATCTCGGGTGCTGCATTTTGTCGCTTATCTCAAGCTATCTTCGGTTGCTGTTGTGAAAGC
TGGATCGTGGATAGGGGCAAGTGTATATTCGTTAGGGGCTGCTAAGAAGCTTCTTTGTGA
AACGCATGCACTTACCTGCAGGGCCGAGGATGCTAATCTATGTAAGCAAGCGTGTACAGT
TTTTGCTAGGTCATAGCCTCCAATTATTTGTCAATGAATCTGAGTCAATAAAAGGAACGA
AGGTTCAGTGTAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id A3P0J9
Definition sp|A3P0J9|Y3900_BURP0 UPF0102 protein BURPS1106A_3900 OS=Burkholderia pseudomallei (strain 1106a)
Align length 95
Score (bit) 30.4
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952969|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_I12, 5'
(431 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A3P0J9|Y3900_BURP0 UPF0102 protein BURPS1106A_3900 OS=Burkhol... 30 3.2

>sp|A3P0J9|Y3900_BURP0 UPF0102 protein BURPS1106A_3900
OS=Burkholderia pseudomallei (strain 1106a)
GN=BURPS1106A_3900 PE=3 SV=1
Length = 144

Score = 30.4 bits (67), Expect = 3.2
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 13/95 (13%)
Frame = +2

Query: 128 SFDTKKSRFLSWQ-----------RGGDVSRVLHFVAYLKLSSVAVVKAGSWIGASVYSL 274
+F+T+ RFL RGG++ V+ + +A S G + S+
Sbjct: 35 AFETRAQRFLERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVRARANSRYGGAAASI 94

Query: 275 GAAKK--LLCETHALTCRAEDANLCKQACTVFARS 373
GA K+ LL HA R AN C+ F S
Sbjct: 95 GARKRMRLLLAAHAFWARTGGANACRFDVVAFEGS 129


tr_hit_id B0DK38
Definition tr|B0DK38|B0DK38_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82)
Align length 61
Score (bit) 34.7
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952969|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_I12, 5'
(431 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0DK38|B0DK38_LACBS Predicted protein OS=Laccaria bicolor (st... 35 2.5
tr|A4CJT6|A4CJT6_9FLAO Putative outer membrane protein probably ... 33 7.1

>tr|B0DK38|B0DK38_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_303702 PE=3 SV=1
Length = 1039

Score = 34.7 bits (78), Expect = 2.5
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Frame = -3

Query: 342 HRLASSALQVSACVSQRSFLAAPNE------YTLAPIHDPAFTTATEDSLR*ATKCSTRD 181
H+L +A++++ C++ R+F+AA N Y L ++ A T++S AT+ S +
Sbjct: 764 HKLNIAAIEINQCLADRNFMAATNAVYNFWLYELCDVYIEAMKPMTDESASPATRKSAQQ 823

Query: 180 T 178
T
Sbjct: 824 T 824


>tr|A4CJT6|A4CJT6_9FLAO Putative outer membrane protein probably
involved in nutrient binding OS=Robiginitalea biformata
HTCC2501 GN=RB2501_09830 PE=4 SV=1
Length = 1066

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/66 (24%), Positives = 37/66 (56%)
Frame = +2

Query: 2 IHIESEEEVGTASRWLSSEIHFIYDGWD*NQAVTHLHIMQQGSFDTKKSRFLSWQRGGDV 181
++ +++ +G +++++S +Y WD N + + ++ GS+D + L++ GG
Sbjct: 522 LNAQNKGGIGVSTQYISG----VYQTWDNNNTIWNHDVILNGSYDLSEKLDLTFNVGGQ- 576

Query: 182 SRVLHF 199
SR+ HF
Sbjct: 577 SRLTHF 582