DK952985 |
Clone id |
TST38A01NGRL0015_J04 |
Library |
TST38 |
Length |
581 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_J04. 5' end sequence. |
Accession |
DK952985 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3127Contig1 |
Sequence |
AGAACCGACAGTAATACATTTCTGCGTTTTCAGCTTCGACGACCTTGTACATAAGGAGAG ATATGGCATCGCCGTCGTCTGCAGCATCGTCTCCTCACAGCACGATGCAGTTTCTCAGTT CTCTGCTATCACAACGAGGTCCTAACGCGCTGCCTTACAGCGAGGACGTGAAGCTCCTTA TTCGGCAGCATCTGCTGAATTTGATGCAAGAGCTTCCCAGCTTGCGTGCCAAGCCGGCCT CCTTCGTGCACAACGATGGAACCTCTGCAAATCTCCTACAGGTTGATGGCACGGTTCCCA TGACCTTTCATGGTGCCTCCTACAACATTCCCGTCATCATCTGGCTTCGTGAGTCCTACC CCAAGGCACCTCCTCGTGTCTTCGTCTCCCCTACCAAAGACATGATCATCAAGCGCCCTC ACAAACACGTCGATGCATCAGGTATGGTCTCCCTTCCTTATCTCACAAAGCTGGTTTTAC CCTCGCTCACAATCTTGCATACCTTGCACGTGCGCTTAGCTCCATGTTCATTCAATTATC CGCCCCTCATCTCTAAGCCCTCTTCCCCTTCTTCAAACCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q99816 |
Definition |
sp|Q99816|TS101_HUMAN Tumor susceptibility gene 101 protein OS=Homo sapiens |
Align length |
108 |
Score (bit) |
87.0 |
E-value |
6.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LHG8 |
Definition |
tr|Q9LHG8|Q9LHG8_ARATH And human tumor susceptibility gene-like protein (Putative uncharacterized protein At3g12400) (Putative uncharacterized protein) (Putative uncharacterized protein T2E22.28) OS=Arabidopsis thaliana |
Align length |
130 |
Score (bit) |
183.0 |
E-value |
5.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952985|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_J04, 5' (581 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9LHG8|Q9LHG8_ARATH And human tumor susceptibility gene-like ... 183 5e-45 tr|A7QHJ8|A7QHJ8_VITVI Chromosome chr5 scaffold_98, whole genome... 180 6e-44 tr|Q9FFY6|Q9FFY6_ARATH Similarity to nascent polypeptide associa... 174 4e-42 tr|A9PJF9|A9PJF9_POPJC Putative uncharacterized protein OS=Popul... 173 5e-42 tr|A7PKJ3|A7PKJ3_VITVI Chromosome chr15 scaffold_19, whole genom... 159 1e-37 tr|Q6ESB7|Q6ESB7_ORYSJ Os02g0833300 protein OS=Oryza sativa subs... 155 2e-36 tr|B8AFJ3|B8AFJ3_ORYSI Putative uncharacterized protein OS=Oryza... 155 2e-36 tr|A9TJ74|A9TJ74_PHYPA Predicted protein OS=Physcomitrella paten... 147 3e-34 tr|A9S7R6|A9S7R6_PHYPA Predicted protein OS=Physcomitrella paten... 139 1e-31 tr|A3AD24|A3AD24_ORYSJ Putative uncharacterized protein OS=Oryza... 136 1e-30 tr|A8IU80|A8IU80_CHLRE Subunit of the ESCRT-I complex OS=Chlamyd... 122 1e-26 tr|A7SAT5|A7SAT5_NEMVE Predicted protein OS=Nematostella vectens... 96 1e-18 tr|Q5C2L5|Q5C2L5_SCHJA SJCHGC08434 protein (Fragment) OS=Schisto... 96 2e-18 tr|Q09HA5|Q09HA5_MACMU Tumor susceptibility protein 101 (Fragmen... 88 3e-16 tr|Q09HA3|Q09HA3_MACMU Tumor susceptibility protein 101 (Fragmen... 88 3e-16 tr|Q01DC3|Q01DC3_OSTTA Putative human tumor susceptibility gene-... 88 4e-16 tr|Q6P2Z8|Q6P2Z8_XENTR Tumor susceptibility gene 101 OS=Xenopus ... 87 5e-16 tr|Q6NUD5|Q6NUD5_XENLA MGC81040 protein OS=Xenopus laevis GN=MGC... 87 5e-16 tr|Q6IQ70|Q6IQ70_DANRE Tumor susceptibility gene 101 OS=Danio re... 87 5e-16 tr|Q6DDX9|Q6DDX9_XENLA Tsg101-prov protein OS=Xenopus laevis GN=... 87 5e-16 tr|A3KN51|A3KN51_BOVIN TSG101 protein OS=Bos taurus GN=TSG101 PE... 87 5e-16 tr|Q5RC92|Q5RC92_PONAB Putative uncharacterized protein DKFZp459... 87 7e-16 tr|Q09HB3|Q09HB3_MACMU Tumor susceptibility protein 101 (Fragmen... 87 7e-16 tr|Q09HA7|Q09HA7_MACMU Tumor susceptibility protein 101 (Fragmen... 87 7e-16 tr|Q09HA2|Q09HA2_MACMU Tumor susceptibility protein 101 (Fragmen... 87 7e-16 tr|Q4SAD8|Q4SAD8_TETNG Chromosome 13 SCAF14688, whole genome sho... 87 9e-16 tr|Q09HC3|Q09HC3_MACMU Tumor susceptibility protein 101 (Fragmen... 87 9e-16 tr|Q09HB7|Q09HB7_MACMU Tumor susceptibility protein 101 (Fragmen... 87 9e-16 tr|Q09HB4|Q09HB4_MACMU Tumor susceptibility protein 101 (Fragmen... 87 9e-16 tr|Q09HB2|Q09HB2_MACMU Tumor susceptibility protein 101 (Fragmen... 87 9e-16
>tr|Q9LHG8|Q9LHG8_ARATH And human tumor susceptibility gene-like protein (Putative uncharacterized protein At3g12400) (Putative uncharacterized protein) (Putative uncharacterized protein T2E22.28) OS=Arabidopsis thaliana GN=T2E22.28 PE=2 SV=1 Length = 398
Score = 183 bits (465), Expect = 5e-45 Identities = 88/130 (67%), Positives = 101/130 (77%) Frame = +3
Query: 108 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 287 QFLSS LSQRGP+++PY E K LIRQHLLNL+ PSL K ASF+HNDG S NLLQ D Sbjct: 13 QFLSSALSQRGPSSVPYEESNKWLIRQHLLNLISSYPSLEPKTASFMHNDGRSVNLLQAD 72
Query: 288 GTVPMTFHGASYNIPVIIWLRESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLT 467 GT+PM FHG +YNIPVIIWL ESYP+ PP V+V+PT DMIIKRPH HV SG+VSLPYL Sbjct: 73 GTIPMPFHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAHVTPSGLVSLPYLQ 132
Query: 468 KLVLPSLTIL 497 V PS ++ Sbjct: 133 NWVYPSSNLV 142
>tr|A7QHJ8|A7QHJ8_VITVI Chromosome chr5 scaffold_98, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038814001 PE=4 SV=1 Length = 425
Score = 180 bits (456), Expect = 6e-44 Identities = 84/132 (63%), Positives = 106/132 (80%) Frame = +3
Query: 102 TMQFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQ 281 T Q+LSS+LSQRGP+ALPY+EDVK LIRQHLL+L + PSL+ K A++ HNDG + NLLQ Sbjct: 23 TQQWLSSVLSQRGPSALPYAEDVKWLIRQHLLSLSENYPSLQPKTATYTHNDGRTVNLLQ 82
Query: 282 VDGTVPMTFHGASYNIPVIIWLRESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPY 461 DGTVPM + +YNIP+IIWL ESYP+ PP V+V+PT+DM+IKRPH HV+ SGMVS+PY Sbjct: 83 SDGTVPMLYLDVTYNIPIIIWLMESYPRHPPCVYVNPTRDMVIKRPHSHVNPSGMVSIPY 142
Query: 462 LTKLVLPSLTIL 497 L V PS ++ Sbjct: 143 LHSWVYPSSNLV 154
>tr|Q9FFY6|Q9FFY6_ARATH Similarity to nascent polypeptide associated complex alpha chain OS=Arabidopsis thaliana GN=At5g13860 PE=4 SV=1 Length = 368
Score = 174 bits (440), Expect = 4e-42 Identities = 83/130 (63%), Positives = 100/130 (76%) Frame = +3
Query: 108 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 287 QFLSS L+QRGP+ALPY+E+ K LIRQHLLNL+ SL K A+F HNDG S LLQ D Sbjct: 13 QFLSSALTQRGPSALPYAENTKSLIRQHLLNLISSYTSLDPKTATFTHNDGRSVILLQAD 72
Query: 288 GTVPMTFHGASYNIPVIIWLRESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLT 467 GT+PM F G SYNIPV+IWL ESYP+ PP V+V+PT+DMIIKRPH +V SG+VSLPYL Sbjct: 73 GTIPMPFQGVSYNIPVVIWLLESYPQYPPCVYVNPTRDMIIKRPHSNVSPSGLVSLPYLQ 132
Query: 468 KLVLPSLTIL 497 + PS ++ Sbjct: 133 NWIYPSSNLV 142
>tr|A9PJF9|A9PJF9_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 403
Score = 173 bits (439), Expect = 5e-42 Identities = 81/130 (62%), Positives = 101/130 (77%) Frame = +3
Query: 108 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 287 QFLSS+LSQRGP+ALPY+ED K LIRQHL++L PSL K A+F HNDG + NLLQ D Sbjct: 13 QFLSSVLSQRGPSALPYTEDTKWLIRQHLVSLTSTFPSLEPKTATFTHNDGRTVNLLQAD 72
Query: 288 GTVPMTFHGASYNIPVIIWLRESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLT 467 GTVPMTF +YNIPVIIWL ESYP+ PP V+V+PT+DM+IKR H V+ SG+V++PYL Sbjct: 73 GTVPMTFESVTYNIPVIIWLIESYPRHPPCVYVNPTRDMVIKRSHSFVNPSGLVAVPYLQ 132
Query: 468 KLVLPSLTIL 497 + PS ++ Sbjct: 133 NWIYPSSNLV 142
>tr|A7PKJ3|A7PKJ3_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019200001 PE=3 SV=1 Length = 504
Score = 159 bits (401), Expect = 1e-37 Identities = 68/126 (53%), Positives = 98/126 (77%) Frame = +3
Query: 108 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 287 QFL+S+LS+RGP+ALPY+EDVK +IRQH L+L P+L + A++ HNDG + NLL+V+ Sbjct: 14 QFLTSVLSRRGPSALPYAEDVKWMIRQHFLSLADAFPALHPQTAAYTHNDGRTVNLLRVE 73
Query: 288 GTVPMTFHGASYNIPVIIWLRESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLT 467 G +PM + +Y IP+++WL E+YP+ PP V+V+PT+ M+IKRPH HV+ SG+VSLPYL Sbjct: 74 GNIPMVYLQVTYYIPIVVWLMEAYPRQPPCVYVNPTRQMVIKRPHPHVNPSGLVSLPYLQ 133
Query: 468 KLVLPS 485 + P+ Sbjct: 134 NWIYPT 139
>tr|Q6ESB7|Q6ESB7_ORYSJ Os02g0833300 protein OS=Oryza sativa subsp. japonica GN=OJ1282_E10.10 PE=2 SV=1 Length = 402
Score = 155 bits (391), Expect = 2e-36 Identities = 75/131 (57%), Positives = 96/131 (73%), Gaps = 1/131 (0%) Frame = +3
Query: 108 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 287 QFL++ LSQRGP+ALPY+EDVK LIR HL+ L PSL K A F HNDG +A+LLQ D Sbjct: 21 QFLNTALSQRGPSALPYAEDVKWLIRNHLVALADAFPSLHPKAALFTHNDGRAAHLLQAD 80
Query: 288 GTVPMTFHGASYNIPVIIWLRESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMV-SLPYL 464 GT+P+ GASYN+P ++WL E YP++PP VF+SPT+DM+IK H VD SG+V + PYL Sbjct: 81 GTIPIHHAGASYNLPAVLWLPEPYPRSPPLVFLSPTRDMVIKPHHPLVDRSGLVANAPYL 140
Query: 465 TKLVLPSLTIL 497 V PS ++ Sbjct: 141 RSWVFPSSNLV 151
>tr|B8AFJ3|B8AFJ3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09582 PE=4 SV=1 Length = 487
Score = 155 bits (391), Expect = 2e-36 Identities = 75/131 (57%), Positives = 96/131 (73%), Gaps = 1/131 (0%) Frame = +3
Query: 108 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 287 QFL++ LSQRGP+ALPY+EDVK LIR HL+ L PSL K A F HNDG +A+LLQ D Sbjct: 21 QFLNTALSQRGPSALPYAEDVKWLIRNHLVALADAFPSLHPKAALFTHNDGRAAHLLQAD 80
Query: 288 GTVPMTFHGASYNIPVIIWLRESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMV-SLPYL 464 GT+P+ GASYN+P ++WL E YP++PP VF+SPT+DM+IK H VD SG+V + PYL Sbjct: 81 GTIPIHHAGASYNLPAVLWLPEPYPRSPPLVFLSPTRDMVIKPHHPLVDRSGLVANAPYL 140
Query: 465 TKLVLPSLTIL 497 V PS ++ Sbjct: 141 RSWVFPSSNLV 151
>tr|A9TJ74|A9TJ74_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170379 PE=4 SV=1 Length = 409
Score = 147 bits (372), Expect = 3e-34 Identities = 68/125 (54%), Positives = 88/125 (70%) Frame = +3
Query: 108 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 287 QFL+ LSQRGP AL Y ED K IR+HLL ++QE P L+ K A F HNDG + NLLQ + Sbjct: 15 QFLNQALSQRGPQALAYVEDEKWTIREHLLKVLQEFPGLQVKSAVFNHNDGRTLNLLQAE 74
Query: 288 GTVPMTFHGASYNIPVIIWLRESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLT 467 GT+PM + YNIP+ IWL E+YP+ PP ++V PT+DM+I + H +VD SGMV+ YL Sbjct: 75 GTIPMFYQDVKYNIPINIWLLETYPRQPPLIYVKPTRDMVITQRHPNVDGSGMVNCQYLQ 134
Query: 468 KLVLP 482 + V P Sbjct: 135 QWVFP 139
>tr|A9S7R6|A9S7R6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_182103 PE=4 SV=1 Length = 369
Score = 139 bits (350), Expect = 1e-31 Identities = 68/125 (54%), Positives = 85/125 (68%) Frame = +3
Query: 108 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 287 QFL+ LSQRGP AL Y ED K IR+HLL ++QE P L+ K A F HNDG NLLQ + Sbjct: 15 QFLNQALSQRGPQALAYVEDDKWTIREHLLKVLQEFPGLQVKTAVFNHNDGRILNLLQAE 74
Query: 288 GTVPMTFHGASYNIPVIIWLRESYPKAPPRVFVSPTKDMIIKRPHKHVDASGMVSLPYLT 467 GT+PM + YNIPV +WL E+YP+ P VFV+PT+DMII H +VD SGMV+ L Sbjct: 75 GTIPMFYQDVKYNIPVTLWLLETYPRQAPLVFVNPTRDMIITPRHPNVDGSGMVNSISLQ 134
Query: 468 KLVLP 482 + + P Sbjct: 135 QWIYP 139
>tr|A3AD24|A3AD24_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008696 PE=4 SV=1 Length = 261
Score = 136 bits (342), Expect = 1e-30 Identities = 64/113 (56%), Positives = 82/113 (72%) Frame = +3
Query: 108 QFLSSLLSQRGPNALPYSEDVKLLIRQHLLNLMQELPSLRAKPASFVHNDGTSANLLQVD 287 QFL++ LSQRGP+ALPY+EDVK LIR HL+ L PSL K A F HNDG +A+LLQ D Sbjct: 21 QFLNTALSQRGPSALPYAEDVKWLIRNHLVALADAFPSLHPKAALFTHNDGRAAHLLQAD 80
Query: 288 GTVPMTFHGASYNIPVIIWLRESYPKAPPRVFVSPTKDMIIKRPHKHVDASGM 446 GT+P+ GASYN+P ++WL E YP++PP VF+SPT+DM R V + G+ Sbjct: 81 GTIPIHHAGASYNLPAVLWLPEPYPRSPPLVFLSPTRDMATLRSRGEVVSDGV 133
|