DK952988
Clone id TST38A01NGRL0015_J07
Library
Length 810
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_J07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
ATTGCGGGGAAAGAGTTTTGGCTTGAGGGGCTGGGGCTGCCTCGGGAGGGAGGCCCCGGC
CGCCCTACTTGTGACGTGCTGCAAAGTCCCCCCCCCCCCTTGATTTTTGGCCTGTGGGTG
CATCCGCCCTCCTGCCCCTTCTGTGGGGGGTTTGTGTACTTGGATTCGGTTCAGCCTTCA
TGGTGGCACCGGTGCATCGAATTTCTTGGGACGCTCGTTTGCAGATGCGGGCATCTTAGT
GGTTTTTTACGCTGGGACATAGCTTCCATCAAAAAGCCTGTGGTTCGGATCATTGCTACC
GTCGAAGCTTTTGCTTGGCCCTTTTTGCTCGGGGAAGTTGAAGGCATGGCCTCTTTTGGT
GGCAGCTGAGGAGTCCGGGCGCCTTCTCCCTATGCTGTCCTTCTACGACTGATATTATCC
TGCTTGCTGCTCGTCGGTTGAGGTTTCTTCTTCTTTTTCAGGTTGGCCTGCTCGGGTCGA
TGATGGAGATATTCGGGCTCCGCCCTTCTTGCGACTACCATTTTTGGCCTTGGGTGATCT
TCTGCGATGGAGACCTTAGCTTGGGGGAAGGAGCTAGCTTTCTGGTGGGCACCCCGTTTT
GTGAATCCCAGGGGTTTCTTCTTTTTCTCCTATGTTTATTGGGTTTGTTTGGTTTTATGG
GGGGGGGGGGGACCCCCCGTTTCCCCCCTATTCTTTTTGAGAATTTCCCTTTTTTGGGCC
CTTTGAACCCCCCCTTACCCCCCAACCAATTGGGGGGGAGAGGGGGTTTTTTTAAAATTT
TATTTTTTTTTTTTTGGTTTTTTTTTTTTT
■■Homology search results ■■ -
sp_hit_id Q0PHV7
Definition sp|Q0PHV7|DACT3_MOUSE Dapper homolog 3 OS=Mus musculus
Align length 39
Score (bit) 36.2
E-value 0.22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952988|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_J07, 5'
(810 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0PHV7|DACT3_MOUSE Dapper homolog 3 OS=Mus musculus GN=Dact3 ... 36 0.22
sp|Q9Y467|SALL2_HUMAN Sal-like protein 2 OS=Homo sapiens GN=SALL... 34 1.1
sp|Q2IR55|PYRD_RHOP2 Dihydroorotate dehydrogenase OS=Rhodopseudo... 33 1.5
sp|Q9QX96|SALL2_MOUSE Sal-like protein 2 OS=Mus musculus GN=Sall... 33 1.9
sp|Q7L2J0|MEPCE_HUMAN 7SK snRNA methylphosphate capping enzyme O... 33 1.9
sp|P34092|MYOB_DICDI Myosin IB heavy chain OS=Dictyostelium disc... 33 2.5
sp|Q8K3A9|MEPCE_MOUSE 7SK snRNA methylphosphate capping enzyme O... 32 3.2
sp|Q11053|PKNH_MYCTU Probable serine/threonine-protein kinase pk... 32 4.2
sp|Q8F7K1|IF2_LEPIN Translation initiation factor IF-2 OS=Leptos... 32 4.2
sp|Q13D13|PYRD_RHOPS Dihydroorotate dehydrogenase OS=Rhodopseudo... 32 5.5
sp|P08393|ICP0_HHV11 Trans-acting transcriptional protein ICP0 O... 32 5.5
sp|Q9C6H4|SINL1_ARATH E3 ubiquitin-protein ligase SINA-like 1 OS... 31 7.2
sp|A4Z2G7|PYRD_BRASO Dihydroorotate dehydrogenase OS=Bradyrhizob... 31 7.2
sp|P0C5J9|SHKB1_RAT SH3KBP1-binding protein 1 OS=Rattus norvegic... 31 9.4
sp|P00620|PA2_BITGA Phospholipase A2 OS=Bitis gabonica PE=1 SV=1 31 9.4

>sp|Q0PHV7|DACT3_MOUSE Dapper homolog 3 OS=Mus musculus GN=Dact3
PE=2 SV=1
Length = 610

Score = 36.2 bits (82), Expect = 0.22
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -3

Query: 142 RRGRRADAPTGQKSRGGGDFAARHK*GGRGLPPEAAPAP 26
RR RR A + S GG D AR + G R PPEA+P P
Sbjct: 255 RRRRRRGAGQPRTSPGGADGGARRQNGARPRPPEASPPP 293


>sp|Q9Y467|SALL2_HUMAN Sal-like protein 2 OS=Homo sapiens GN=SALL2
PE=1 SV=3
Length = 1007

Score = 33.9 bits (76), Expect = 1.1
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = -3

Query: 169 PNPSTQTPHRRGRRAD-----APTGQKSRGGGDFA-ARHK*GGRGLPPEAAPAP 26
P T P RRG + A TG + GGG A K G LPPE+ PAP
Sbjct: 107 PTDPTWGPERRGEESSGHFLVAATGTAAGGGGGLILASPKLGATPLPPESTPAP 160


>sp|Q2IR55|PYRD_RHOP2 Dihydroorotate dehydrogenase
OS=Rhodopseudomonas palustris (strain HaA2) GN=pyrD PE=3
SV=1
Length = 364

Score = 33.5 bits (75), Expect = 1.5
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = -1

Query: 381 RPDSSAATKRGHAFNFPEQKGPSKSFD-GSNDPNHRLFDG-SYVPA*KTTKMPASANERP 208
RPD S R NFP G + FD + P+ L G +V T P + N RP
Sbjct: 38 RPDDSKLAVRAFGLNFPNPVGIAAGFDKNAEAPDALLRLGFGFVEIGTVTPKPQAGNPRP 97

Query: 207 KKFDAPVPP*RLNRIQVHKPPTEGAGGRMHPQAKNQGG 94
+ F +NR+ + E R+ +A+ QGG
Sbjct: 98 RLFRLERDEAIINRMGFNNDGAEAVLRRLAARAQ-QGG 134


>sp|Q9QX96|SALL2_MOUSE Sal-like protein 2 OS=Mus musculus GN=Sall2
PE=2 SV=1
Length = 1004

Score = 33.1 bits (74), Expect = 1.9
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = -3

Query: 169 PNPSTQTPHRRGRRAD-----APTGQKSRGGGDFA-ARHK*GGRGLPPEAAPAP 26
P+P T P RRG + A TG + GGG A K G LPPE+ PAP
Sbjct: 108 PDP-TWGPERRGEESSGQFLVAATGTAAGGGGGLILASPKLGATPLPPESTPAP 160


>sp|Q7L2J0|MEPCE_HUMAN 7SK snRNA methylphosphate capping enzyme
OS=Homo sapiens GN=MEPCE PE=1 SV=1
Length = 689

Score = 33.1 bits (74), Expect = 1.9
Identities = 32/113 (28%), Positives = 41/113 (36%), Gaps = 6/113 (5%)
Frame = -1

Query: 396 SIGRRRPDSSAATKRGHAFNFPEQKGPSKSFDGSNDPNHRLFD--GSYVPA*KTTKMPAS 223
++GR P ++A + G GP G RL D G P P
Sbjct: 64 AVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEA----RLSDPPGRAAP-------PDV 112

Query: 222 ANERP----KKFDAPVPP*RLNRIQVHKPPTEGAGGRMHPQAKNQGGGGTLQH 76
ER + P PP N Q H+PP G GG+ GGGG +H
Sbjct: 113 GEERRGGGGTELGPPAPPRPRNGYQPHRPP-GGGGGKRRNSCNVGGGGGGFKH 164


>sp|P34092|MYOB_DICDI Myosin IB heavy chain OS=Dictyostelium
discoideum GN=myoB PE=1 SV=2
Length = 1111

Score = 32.7 bits (73), Expect = 2.5
Identities = 22/49 (44%), Positives = 25/49 (51%)
Frame = -3

Query: 169 PNPSTQTPHRRGRRADAPTGQKSRGGGDFAARHK*GGRGLPPEAAPAPQ 23
P P+ Q GR AP G+ + GGG A GGR LP A PAPQ
Sbjct: 1010 PQPTQQGGAPGGR--GAPMGRGAPGGGPAGA----GGRPLPTVAKPAPQ 1052


>sp|Q8K3A9|MEPCE_MOUSE 7SK snRNA methylphosphate capping enzyme
OS=Mus musculus GN=Mepce PE=1 SV=2
Length = 666

Score = 32.3 bits (72), Expect = 3.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1

Query: 192 PVPP*RLNRIQVHKPPTEGAGGRMHPQAKNQGGGGTLQH 76
P PP N Q H+PP G G R + G GG+ +H
Sbjct: 101 PAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGSGGSFKH 139


>sp|Q11053|PKNH_MYCTU Probable serine/threonine-protein kinase pknH
OS=Mycobacterium tuberculosis GN=pknH PE=1 SV=2
Length = 626

Score = 32.0 bits (71), Expect = 4.2
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3

Query: 184 TMKAEPNPSTQTPHRRGRRADAPTGQKSRGGGDFAAR--HK*GGRGLPPEAAPAPQAKT 14
T A+P P+ Q P G+ + AP G ++ GG G PP P+P A+T
Sbjct: 337 TPPAQPGPAGQRPGPTGQPSWAPNSGPMPASGPTPTPQYYQGGGWGAPPSGGPSPWAQT 395


>sp|Q8F7K1|IF2_LEPIN Translation initiation factor IF-2
OS=Leptospira interrogans GN=infB PE=3 SV=1
Length = 880

Score = 32.0 bits (71), Expect = 4.2
Identities = 40/154 (25%), Positives = 57/154 (37%), Gaps = 12/154 (7%)
Frame = -1

Query: 513 RKKGGARISPSSTRAGQPEKEEETSTDEQQAG*YQ-------S*KDSIGRRRPDSSAATK 355
+KKG +PS A P+KE +D S + I R P S + K
Sbjct: 44 KKKGDDPSTPSP--AASPKKETVAESDPSSKPPVMPLPLPDDSGQSPIVRPAPSSHSPAK 101

Query: 354 RGHAFNFPEQKGPSKSFDGS--NDPNHRLFDGSYVPA*KTTKMPASAN---ERPKKFDAP 190
R ++ P K G D + R GS P ++ +N RP + P
Sbjct: 102 R--------EESPGKQDAGRPPRDKDTRQGGGSSYPPSRSPFQKEDSNIIVSRPIQRTGP 153

Query: 189 VPP*RLNRIQVHKPPTEGAGGRMHPQAKNQGGGG 88
P Q ++ P +G GG + QGGGG
Sbjct: 154 SRPNSGGGYQGNRGPGQGGGGYQGNRGPGQGGGG 187


>sp|Q13D13|PYRD_RHOPS Dihydroorotate dehydrogenase
OS=Rhodopseudomonas palustris (strain BisB5) GN=pyrD
PE=3 SV=1
Length = 364

Score = 31.6 bits (70), Expect = 5.5
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Frame = -1

Query: 381 RPDSSAATKRGHAFNFPEQKGPSKSFDGSNDPNHRL--FDGSYVPA*KTTKMPASANERP 208
RPD R NFP G + FD + + L +V T P + N RP
Sbjct: 38 RPDDPKLAVRAFGLNFPNPVGIAAGFDKNAEAPDALMRLGFGFVEIGTVTPKPQAGNPRP 97

Query: 207 KKFDAPVPP*RLNRIQVHKPPTEGAGGRMHPQAKNQGG 94
+ F +NR+ + +E R+ +A+ QGG
Sbjct: 98 RLFRLERDEAVINRMGFNNDGSEAVLRRLAARAQ-QGG 134


tr_hit_id B4PEW8
Definition tr|B4PEW8|B4PEW8_DROYA GE20840 OS=Drosophila yakuba
Align length 47
Score (bit) 40.0
E-value 0.19
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952988|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_J07, 5'
(810 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4PEW8|B4PEW8_DROYA GE20840 OS=Drosophila yakuba GN=GE20840 P... 40 0.19
tr|A9H7P2|A9H7P2_GLUDA Putative secretion protein, HlyD-family O... 40 0.25
tr|Q9VSY7|Q9VSY7_DROME Metal response element-binding transcript... 39 0.33
tr|Q8IQC5|Q8IQC5_DROME Metal response element-binding transcript... 39 0.33
tr|Q494H3|Q494H3_DROME RE65248p (Fragment) OS=Drosophila melanog... 39 0.33
tr|Q1LZ06|Q1LZ06_DROME FI01022p (Fragment) OS=Drosophila melanog... 39 0.33
tr|B4QN64|B4QN64_DROSI GD14182 OS=Drosophila simulans GN=GD14182... 39 0.33
tr|A8JNP3|A8JNP3_DROME Metal response element-binding transcript... 39 0.33
tr|Q0K4F8|Q0K4F8_RALEH Putative uncharacterized protein h16_B031... 39 0.43
tr|Q9GRX2|Q9GRX2_DROME Heavy metal-responsive transcription fact... 38 0.72
tr|Q21D92|Q21D92_RHOPB OmpA/MotB OS=Rhodopseudomonas palustris (... 37 1.6
tr|B4HKQ6|B4HKQ6_DROSE GM25148 OS=Drosophila sechellia GN=GM2514... 37 1.6
tr|Q9NFS1|Q9NFS1_DROME Heavy metal-responsive transcription fact... 36 2.8
tr|Q95TF7|Q95TF7_DROME SD10848p OS=Drosophila melanogaster GN=MT... 36 2.8
tr|B6PIN3|B6PIN3_BRAFL Putative uncharacterized protein (Fragmen... 36 2.8
tr|B6MX18|B6MX18_BRAFL Putative uncharacterized protein OS=Branc... 36 2.8
tr|B4VGU1|B4VGU1_9ACTO Putative uncharacterized protein (Fragmen... 36 3.6
tr|B6GY60|B6GY60_PENCH Pc12g00890 protein OS=Penicillium chrysog... 36 3.6
tr|A2QKU6|A2QKU6_ASPNC Function: in A. niger GABA is used as a n... 36 3.6
tr|A4VHS9|A4VHS9_PSEU5 Putative uncharacterized protein OS=Pseud... 35 4.7
tr|B6KCJ8|B6KCJ8_TOXGO Putative uncharacterized protein OS=Toxop... 35 4.7
tr|B2ASE4|B2ASE4_PODAN Predicted CDS Pa_1_23240 OS=Podospora ans... 35 4.7
tr|A6XDD8|A6XDD8_9PEZI Putative uncharacterized protein (Fragmen... 35 4.7
tr|B6L3J7|B6L3J7_BRAFL Putative uncharacterized protein OS=Branc... 35 4.7
tr|B3NCG2|B3NCG2_DROER GG15376 OS=Drosophila erecta GN=GG15376 P... 35 6.1
tr|B4NPW4|B4NPW4_DROWI GK16707 OS=Drosophila willistoni GN=GK167... 35 8.1
tr|A5K8Y9|A5K8Y9_PLAVI Putative uncharacterized protein OS=Plasm... 35 8.1

>tr|B4PEW8|B4PEW8_DROYA GE20840 OS=Drosophila yakuba GN=GE20840 PE=4
SV=1
Length = 1005

Score = 40.0 bits (92), Expect = 0.19
Identities = 22/47 (46%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2

Query: 29 GWGCLGREA--PAALLVTCCKVP--PPP*FLACGCIRPPAPSVGGLC 157
G GC G A PA CC P P P CGC +P APS GG C
Sbjct: 857 GGGCCGGGAAKPAPAAGGCCGEPKAPKPLNTGCGCAQPSAPSAGGCC 903


>tr|A9H7P2|A9H7P2_GLUDA Putative secretion protein, HlyD-family
OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 /
DSM 5601 / PAl5) GN=GDI3723 PE=4 SV=1
Length = 484

Score = 39.7 bits (91), Expect = 0.25
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -3

Query: 220 KRASQEIRCTGATMKAEPNPSTQTPHRRGRRADAPTGQKSRGGGDFAARHK*GGRGLPPE 41
+R QE+R G + P P+ + P + RR P G + R G A H GGRG P
Sbjct: 236 RRQRQELRGRGRLLHPPPGPAARRPGQGPRRRPGP-GPRHRPHGRAPAPHPGGGRGQPDI 294

Query: 40 AAPA 29
A PA
Sbjct: 295 ADPA 298


>tr|Q9VSY7|Q9VSY7_DROME Metal response element-binding transcription
Factor-1, isoform A OS=Drosophila melanogaster GN=MTF-1
PE=1 SV=2
Length = 791

Score = 39.3 bits (90), Expect = 0.33
Identities = 23/47 (48%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2

Query: 29 GWGCLGREA--PAALLVTCCKVP--PPP*FLACGCIRPPAPSVGGLC 157
G GC G A PA CC P P P CGC RP APS GG C
Sbjct: 639 GGGCCGGGAVKPAPSGGGCCGEPKAPKPVNAGCGCARPSAPSSGGCC 685


>tr|Q8IQC5|Q8IQC5_DROME Metal response element-binding transcription
Factor-1, isoform B OS=Drosophila melanogaster GN=MTF-1
PE=2 SV=1
Length = 570

Score = 39.3 bits (90), Expect = 0.33
Identities = 23/47 (48%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2

Query: 29 GWGCLGREA--PAALLVTCCKVP--PPP*FLACGCIRPPAPSVGGLC 157
G GC G A PA CC P P P CGC RP APS GG C
Sbjct: 418 GGGCCGGGAVKPAPSGGGCCGEPKAPKPVNAGCGCARPSAPSSGGCC 464


>tr|Q494H3|Q494H3_DROME RE65248p (Fragment) OS=Drosophila
melanogaster GN=MTF-1 PE=2 SV=1
Length = 582

Score = 39.3 bits (90), Expect = 0.33
Identities = 23/47 (48%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2

Query: 29 GWGCLGREA--PAALLVTCCKVP--PPP*FLACGCIRPPAPSVGGLC 157
G GC G A PA CC P P P CGC RP APS GG C
Sbjct: 430 GGGCCGGGAVKPAPSGGGCCGEPKAPKPVNAGCGCARPSAPSSGGCC 476


>tr|Q1LZ06|Q1LZ06_DROME FI01022p (Fragment) OS=Drosophila
melanogaster GN=MTF-1 PE=2 SV=1
Length = 582

Score = 39.3 bits (90), Expect = 0.33
Identities = 23/47 (48%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2

Query: 29 GWGCLGREA--PAALLVTCCKVP--PPP*FLACGCIRPPAPSVGGLC 157
G GC G A PA CC P P P CGC RP APS GG C
Sbjct: 430 GGGCCGGGAVKPAPSGGGCCGEPKAPKPVNAGCGCARPSAPSSGGCC 476


>tr|B4QN64|B4QN64_DROSI GD14182 OS=Drosophila simulans GN=GD14182
PE=4 SV=1
Length = 1004

Score = 39.3 bits (90), Expect = 0.33
Identities = 23/47 (48%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2

Query: 29 GWGCLGREA--PAALLVTCCKVP--PPP*FLACGCIRPPAPSVGGLC 157
G GC G A PA CC P P P CGC RP APS GG C
Sbjct: 852 GGGCCGGGAVKPAPSGGGCCGEPKAPKPVNTGCGCARPSAPSSGGCC 898


>tr|A8JNP3|A8JNP3_DROME Metal response element-binding transcription
Factor-1, isoform C OS=Drosophila melanogaster GN=MTF-1
PE=4 SV=1
Length = 1006

Score = 39.3 bits (90), Expect = 0.33
Identities = 23/47 (48%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2

Query: 29 GWGCLGREA--PAALLVTCCKVP--PPP*FLACGCIRPPAPSVGGLC 157
G GC G A PA CC P P P CGC RP APS GG C
Sbjct: 854 GGGCCGGGAVKPAPSGGGCCGEPKAPKPVNAGCGCARPSAPSSGGCC 900


>tr|Q0K4F8|Q0K4F8_RALEH Putative uncharacterized protein h16_B0316
OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428
/ Stanier 337) GN=H16_B0316 PE=4 SV=1
Length = 464

Score = 38.9 bits (89), Expect = 0.43
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1

Query: 208 GTLVCRCGHLSGFLRWDIASIKKPVVRIIATVEAFAW 318
G L CRC H +GF+R + +P R+ A +E +AW
Sbjct: 192 GRLECRCAHCTGFIRTLAGQLARPARRLCAALEDYAW 228


>tr|Q9GRX2|Q9GRX2_DROME Heavy metal-responsive transcription
factor-1 OS=Drosophila melanogaster GN=MTF-1 PE=2 SV=1
Length = 791

Score = 38.1 bits (87), Expect = 0.72
Identities = 23/47 (48%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2

Query: 29 GWGCLGREA--PAALLVTCCKVP--PPP*FLACGCIRPPAPSVGGLC 157
G GC G A PA CC P P P CGC RP APS GG C
Sbjct: 639 GGGCCGGGAVKPAPSGGGCCGEPKAPKPVNDGCGCARPSAPSSGGCC 685