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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952990
Clone id TST38A01NGRL0015_J09
Library
Length 603
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_J09. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CACATCTTTAATGGAACGACAATAAGCAGCACAGCAGAAGTAAGAAGAGGCACTAACGGG
ATAAGGTGACAGAAGACTCTCACAGGGCTCGGGCCATGGCTACGCGTACACTGTGTCAAA
GCCCATCCCTCACAACTTCATTAGGTCTGCTGGCTGCGTCCTCTTCTTCATCGACTAGCG
GCTACTGCTGTGCTCTTCCTTCTCAAGGTTATGGTGTCCCACCCTTGCAGTTTTCTTCGG
CCGCTTTCGAGCAAATGAGATCCCGCAGGCATTCTCTTTTCGTTCATGTTGTAGCGGAAG
AAGCCGAAGCTTTTGTCGCTCCACCCAGTGGCCTCACAATGAACCTGAAAGTGGAGGGTA
CTCTTGCTGATTCTTTGATTCCCAAGGTTGCCGACATCCTGAAGAATGTTGAGGGTGTTT
CTAACCTTAAGGTGTACACATCTGAAGGGGTGGCAACAGTGGAGTTGGAGAAGCAAACGA
CCATTCAAGCCACAGGTGAAGCATCTTCTTTGCTAGAGAAGATTCAAGGAGAGGGGTTCA
AGCTGCAAAACCTTTCTATTAGCTTTGATGACGCCACTGCTGATGCGGATGAGGATATTG
CGT
■■Homology search results ■■ -
sp_hit_id P58342
Definition sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium meliloti
Align length 75
Score (bit) 36.6
E-value 0.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952990|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_J09, 5'
         (603 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium ...    37   0.10 
sp|Q9X5X3|ATCU_SINMW Copper-transporting P-type ATPase OS=Sinorh...    35   0.29 
sp|A2VDJ0|T131L_HUMAN Transmembrane protein 131-like OS=Homo sap...    31   5.5  
sp|Q4X0S7|DPH1_ASPFU Diphthamide biosynthesis protein 1 OS=Asper...    30   7.3  

>sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium
           meliloti GN=actP2 PE=3 SV=1
          Length = 827

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 24/75 (32%), Positives = 38/75 (50%)
 Frame = +3

Query: 324 PSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEA 503
           P   T  L++EG    S + +V   LK V GV++  V  +   ATV L     I  T + 
Sbjct: 79  PRIATEELQIEGMTCASCVSRVEKALKAVPGVADAAVNLATEKATVSL-----ISGTADL 133

Query: 504 SSLLEKIQGEGFKLQ 548
           S+L   ++G G++L+
Sbjct: 134 SALEAAVRGAGYELR 148


>sp|Q9X5X3|ATCU_SINMW Copper-transporting P-type ATPase
           OS=Sinorhizobium medicae (strain WSM419) GN=actP PE=1
           SV=1
          Length = 827

 Score = 35.0 bits (79), Expect = 0.29
 Identities = 21/75 (28%), Positives = 38/75 (50%)
 Frame = +3

Query: 324 PSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEA 503
           P  +T  +++EG    S + +V   LK V GV++  V  +   ATV L     +  + E 
Sbjct: 79  PRIVTEEIQIEGMTCASCVSRVEKALKAVPGVADASVNLATEKATVRL-----VSGSAEI 133

Query: 504 SSLLEKIQGEGFKLQ 548
           S+L   ++G G+ ++
Sbjct: 134 SALAAAVKGAGYGIR 148


>sp|A2VDJ0|T131L_HUMAN Transmembrane protein 131-like OS=Homo sapiens
            GN=KIAA0922 PE=1 SV=2
          Length = 1609

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +3

Query: 327  SGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTS--EGVATVELEKQTTIQATGE 500
            SG+ +NL+   TL  +L+ K  + LKN    SN     S  EG+ T    K+T I+ +  
Sbjct: 1036 SGINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKEGIQTCMFPKETDIKTSEN 1095

Query: 501  ASSLLEK 521
             +   E+
Sbjct: 1096 TAEFKER 1102


>sp|Q4X0S7|DPH1_ASPFU Diphthamide biosynthesis protein 1
           OS=Aspergillus fumigatus GN=dph1 PE=3 SV=1
          Length = 445

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -1

Query: 495 LWLEWSFASPTPLLPPLQMCTP*G*KHPQHSSGCRQPWESKNQQEYP 355
           L ++W +A P PLL P +            + G R+ W+S N   YP
Sbjct: 386 LSIDWGYAFPRPLLTPYEALI---------ALGVREHWDSANSGVYP 423
tr_hit_id Q93VK7
Definition tr|Q93VK7|Q93VK7_ARATH AT5g14910/F2G14_30 (Putative uncharacterized protein) OS=Arabidopsis thaliana
Align length 82
Score (bit) 95.5
E-value 2.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952990|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_J09, 5'
         (603 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q93VK7|Q93VK7_ARATH AT5g14910/F2G14_30 (Putative uncharacteri...    96   2e-18
tr|A9T080|A9T080_PHYPA Predicted protein OS=Physcomitrella paten...    91   4e-17
tr|A7PMF1|A7PMF1_VITVI Chromosome chr14 scaffold_21, whole genom...    89   2e-16
tr|Q9LFR4|Q9LFR4_ARATH Putative uncharacterized protein F2G14_30...    88   4e-16
tr|Q5WMQ0|Q5WMQ0_ORYSJ Putative uncharacterized protein OSJNBa00...    87   6e-16
tr|Q0DJ21|Q0DJ21_ORYSJ Os05g0337400 protein OS=Oryza sativa subs...    87   6e-16
tr|A3B2T0|A3B2T0_ORYSJ Putative uncharacterized protein OS=Oryza...    87   6e-16
tr|A2Y3C4|A2Y3C4_ORYSI Putative uncharacterized protein OS=Oryza...    87   6e-16
tr|B6TI14|B6TI14_MAIZE Putative uncharacterized protein OS=Zea m...    85   3e-15
tr|A9RV35|A9RV35_PHYPA Predicted protein OS=Physcomitrella paten...    83   1e-14
tr|A9NT30|A9NT30_PICSI Putative uncharacterized protein OS=Picea...    82   3e-14
tr|A9S9T8|A9S9T8_PHYPA Predicted protein OS=Physcomitrella paten...    80   1e-13
tr|B6Y078|B6Y078_ANATH Copper ion binding protein OS=Anaerocellu...    38   0.52 
tr|A6X3Z4|A6X3Z4_OCHA4 Heavy metal translocating P-type ATPase O...    36   1.5  
tr|A0AJV7|A0AJV7_LISW6 Complete genome OS=Listeria welshimeri se...    36   1.5  
tr|A8UT36|A8UT36_9AQUI Mercuric reductase MerA OS=Hydrogenivirga...    36   1.5  
tr|B7V4Z9|B7V4Z9_PSEAE Heavy metal translocating P-type ATPase O...    35   2.6  
tr|Q8Y648|Q8Y648_LISMO Lmo1852 protein OS=Listeria monocytogenes...    35   4.4  
tr|Q71YG4|Q71YG4_LISMF Heavy metal-binding protein OS=Listeria m...    35   4.4  
tr|Q4EPP8|Q4EPP8_LISMO Heavy metal-binding protein OS=Listeria m...    35   4.4  
tr|Q4EH63|Q4EH63_LISMO Heavy metal-binding protein OS=Listeria m...    35   4.4  
tr|B6KXV0|B6KXV0_BRAFL Putative uncharacterized protein OS=Branc...    35   4.4  
tr|B6KXU2|B6KXU2_BRAFL Putative uncharacterized protein OS=Branc...    35   4.4  
tr|A6AST1|A6AST1_VIBHA Copper-transporting P-type ATPase OS=Vibr...    34   5.7  
tr|Q92AF6|Q92AF6_LISIN Lin1966 protein OS=Listeria innocua GN=li...    34   7.5  
tr|Q8FQL1|Q8FQL1_COREF Putative uncharacterized protein OS=Coryn...    34   7.6  
tr|Q74NR3|Q74NR3_BACC1 Copper ion binding protein OS=Bacillus ce...    33   9.8  
tr|B3EDB9|B3EDB9_CHLL2 Magnesium chelatase ATPase subunit D OS=C...    33   9.8  
tr|B7JU29|B7JU29_BACCE Conserved domain protein OS=Bacillus cere...    33   9.8  
tr|A1BZQ9|A1BZQ9_BACCE Copper ion binding protein OS=Bacillus ce...    33   9.8  

>tr|Q93VK7|Q93VK7_ARATH AT5g14910/F2G14_30 (Putative uncharacterized
           protein) OS=Arabidopsis thaliana GN=At5g14910 PE=2 SV=1
          Length = 178

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 49/82 (59%), Positives = 62/82 (75%)
 Frame = +3

Query: 321 PPSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGE 500
           P   LTM  + +GTL ++ IP V   L++++GVSNLKV  SEGVA VEL KQTT+QATG 
Sbjct: 89  PSDMLTMFFQADGTLNEAAIPNVTRALQDIDGVSNLKVQVSEGVAVVELLKQTTVQATGV 148

Query: 501 ASSLLEKIQGEGFKLQNLSISF 566
           AS+L+E IQG GFKLQ L++SF
Sbjct: 149 ASNLVETIQGAGFKLQTLNLSF 170


>tr|A9T080|A9T080_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_167413 PE=4 SV=1
          Length = 194

 Score = 91.3 bits (225), Expect = 4e-17
 Identities = 47/82 (57%), Positives = 59/82 (71%)
 Frame = +3

Query: 321 PPSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGE 500
           P  GL+M  K EG+L ++ IPKV  +L+  EGVS +KVY  EG ATVEL KQT IQATG 
Sbjct: 92  PAEGLSMYFKAEGSLNENNIPKVTKVLEETEGVSQVKVYVLEGAATVELVKQTDIQATGV 151

Query: 501 ASSLLEKIQGEGFKLQNLSISF 566
           ASSL++ I+  GFK+Q LS+ F
Sbjct: 152 ASSLVQLIETAGFKMQALSLGF 173


>tr|A7PMF1|A7PMF1_VITVI Chromosome chr14 scaffold_21, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020796001
           PE=4 SV=1
          Length = 153

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%)
 Frame = +3

Query: 321 PPSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGE 500
           P   LTM  + EGT+ ++ IP V   L+  EG++ LKV   EG+A+V L KQTT+QATG 
Sbjct: 64  PSDILTMFFQAEGTMNETAIPTVTKALEETEGITTLKVQVVEGIASVALTKQTTVQATGV 123

Query: 501 ASSLLEKIQGEGFKLQNLSISF 566
           ASSL+E IQG GFKLQ L++SF
Sbjct: 124 ASSLVETIQGSGFKLQTLNLSF 145


>tr|Q9LFR4|Q9LFR4_ARATH Putative uncharacterized protein F2G14_30
           OS=Arabidopsis thaliana GN=F2G14_30 PE=4 SV=1
          Length = 175

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 47/82 (57%), Positives = 60/82 (73%)
 Frame = +3

Query: 321 PPSGLTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGE 500
           P   LTM  + +GTL ++ IP V   L++++GVSNLKV  SEGVA VE   QTT+QATG 
Sbjct: 89  PSDMLTMFFQADGTLNEAAIPNVTRALQDIDGVSNLKVQVSEGVAVVE---QTTVQATGV 145

Query: 501 ASSLLEKIQGEGFKLQNLSISF 566
           AS+L+E IQG GFKLQ L++SF
Sbjct: 146 ASNLVETIQGAGFKLQTLNLSF 167


>tr|Q5WMQ0|Q5WMQ0_ORYSJ Putative uncharacterized protein
           OSJNBa0053E01.2 OS=Oryza sativa subsp. japonica
           GN=OSJNBa0053E01.2 PE=4 SV=1
          Length = 536

 Score = 87.4 bits (215), Expect = 6e-16
 Identities = 43/78 (55%), Positives = 57/78 (73%)
 Frame = +3

Query: 333 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEASSL 512
           L +  K EGT+ +  IPK+   L+ VEGVS+L+V   EG+ +V L K+TT+QATG AS+L
Sbjct: 390 LILYFKAEGTMEERAIPKITQALEGVEGVSDLEVLIEEGIGSVVLTKETTVQATGVASNL 449

Query: 513 LEKIQGEGFKLQNLSISF 566
           +E IQG GFKLQ LS+SF
Sbjct: 450 VEAIQGAGFKLQTLSLSF 467


>tr|Q0DJ21|Q0DJ21_ORYSJ Os05g0337400 protein OS=Oryza sativa subsp.
           japonica GN=Os05g0337400 PE=4 SV=1
          Length = 346

 Score = 87.4 bits (215), Expect = 6e-16
 Identities = 43/78 (55%), Positives = 57/78 (73%)
 Frame = +3

Query: 333 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEASSL 512
           L +  K EGT+ +  IPK+   L+ VEGVS+L+V   EG+ +V L K+TT+QATG AS+L
Sbjct: 63  LILYFKAEGTMEERAIPKITQALEGVEGVSDLEVLIEEGIGSVVLTKETTVQATGVASNL 122

Query: 513 LEKIQGEGFKLQNLSISF 566
           +E IQG GFKLQ LS+SF
Sbjct: 123 VEAIQGAGFKLQTLSLSF 140


>tr|A3B2T0|A3B2T0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_017352 PE=4 SV=1
          Length = 160

 Score = 87.4 bits (215), Expect = 6e-16
 Identities = 43/78 (55%), Positives = 57/78 (73%)
 Frame = +3

Query: 333 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEASSL 512
           L +  K EGT+ +  IPK+   L+ VEGVS+L+V   EG+ +V L K+TT+QATG AS+L
Sbjct: 63  LILYFKAEGTMEERAIPKITQALEGVEGVSDLEVLIEEGIGSVVLTKETTVQATGVASNL 122

Query: 513 LEKIQGEGFKLQNLSISF 566
           +E IQG GFKLQ LS+SF
Sbjct: 123 VEAIQGAGFKLQTLSLSF 140


>tr|A2Y3C4|A2Y3C4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_19510 PE=4 SV=1
          Length = 160

 Score = 87.4 bits (215), Expect = 6e-16
 Identities = 43/78 (55%), Positives = 57/78 (73%)
 Frame = +3

Query: 333 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEASSL 512
           L +  K EGT+ +  IPK+   L+ VEGVS+L+V   EG+ +V L K+TT+QATG AS+L
Sbjct: 63  LILYFKAEGTMEERAIPKITQALEGVEGVSDLEVLIEEGIGSVVLTKETTVQATGVASNL 122

Query: 513 LEKIQGEGFKLQNLSISF 566
           +E IQG GFKLQ LS+SF
Sbjct: 123 VEAIQGAGFKLQTLSLSF 140


>tr|B6TI14|B6TI14_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 161

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 41/78 (52%), Positives = 57/78 (73%)
 Frame = +3

Query: 333 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEASSL 512
           L +  K EGT+ +  IPK+ + L+ +EGV +L+V   EG+ +V L K+TT+QATG AS+L
Sbjct: 66  LILYFKAEGTMEERAIPKITESLEGMEGVKDLEVLIEEGIGSVVLTKETTVQATGVASNL 125

Query: 513 LEKIQGEGFKLQNLSISF 566
           +E IQG GFKLQ LS+SF
Sbjct: 126 VEAIQGAGFKLQTLSLSF 143


>tr|A9RV35|A9RV35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_161159 PE=4 SV=1
          Length = 197

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 43/78 (55%), Positives = 55/78 (70%)
 Frame = +3

Query: 333 LTMNLKVEGTLADSLIPKVADILKNVEGVSNLKVYTSEGVATVELEKQTTIQATGEASSL 512
           L+M  K EG+L ++ IPK+   L+  EGVS +KVY  EG ATVEL KQT IQ TG ASSL
Sbjct: 95  LSMFFKAEGSLNENAIPKLTKTLEGTEGVSQVKVYVVEGAATVELVKQTNIQETGVASSL 154

Query: 513 LEKIQGEGFKLQNLSISF 566
           ++ I+  GFK+Q LS+ F
Sbjct: 155 VQLIEQAGFKMQALSLGF 172