DK952995
Clone id TST38A01NGRL0015_J14
Library
Length 578
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_J14. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GCCTCTACAGTTTTGCTACGAAAGACTCAATGCGTGAGCGTTCGGTTTGAGCGTTGCGAG
AGCGATAACAAGTTGACGAGCACTAGCAGCAGCACTGAGATGTCTTCATCCATGGCGGCT
GTATCGCCGCAATCGCTTTCTAGCTGCAGAGAGAGTGCGCTCTCAGGGCCATTTGTCTTT
ACCTCGTACATGCCGGATTTCACGCTTTAACCCCAGTTCTCTACGGAGAGGAAGCTGCAG
AGTGCAAGCGATAGCTCCCTCACCCGTCAGTGTTACTGCCCCAAGCATGTCCAAGTTGAA
TGACTTCGATCCCTCCTCCATGCTTCTCAGGCAGCGCATCATCTTTCTGGGCTCCCAGGT
AGATGATTTTTCTGCAGATGTGATTATCAGCCAGTTGCTGCTTCTTGATGCAGAGGACTC
AACAAAGGATATAAAGCTTTTTATAAATTCCCCCGGAGGTTCTGTCACGGCTGGTATGGG
GATCTATGATGCAATCAAGTTGTGTAAGGCAGACGTGTCCACTGTTTGCTTTGGTCTTGC
TGCATCTATGGGTGCCTTTCTACTGGCTTCGGGCACTA
■■Homology search results ■■ -
sp_hit_id Q9SXJ6
Definition sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana
Align length 141
Score (bit) 155.0
E-value 1.0e-37
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952995|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_J14, 5'
(578 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic sub... 155 1e-37
sp|Q8YQX8|CLPP2_ANASP ATP-dependent Clp protease proteolytic sub... 125 2e-28
sp|Q3M726|CLPP3_ANAVT ATP-dependent Clp protease proteolytic sub... 124 4e-28
sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic sub... 122 1e-27
sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic sub... 122 1e-27
sp|Q3MFR5|CLPP1_ANAVT ATP-dependent Clp protease proteolytic sub... 122 2e-27
sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic sub... 120 6e-27
sp|Q59993|CLPP2_SYNY3 ATP-dependent Clp protease proteolytic sub... 119 8e-27
sp|Q8YXH5|CLPP1_ANASP ATP-dependent Clp protease proteolytic sub... 119 8e-27
sp|Q0AWF0|CLPP_SYNWW ATP-dependent Clp protease proteolytic subu... 119 1e-26
sp|Q3ANI8|CLPP1_SYNSC ATP-dependent Clp protease proteolytic sub... 119 1e-26
sp|Q8KC73|CLPP_CHLTE ATP-dependent Clp protease proteolytic subu... 118 2e-26
sp|A6TM61|CLPP_ALKMQ ATP-dependent Clp protease proteolytic subu... 118 2e-26
sp|Q3B0U1|CLPP2_SYNS9 ATP-dependent Clp protease proteolytic sub... 118 2e-26
sp|Q2JIP1|CLPP2_SYNJB ATP-dependent Clp protease proteolytic sub... 118 2e-26
sp|A4ISQ2|CLPP_GEOTN ATP-dependent Clp protease proteolytic subu... 117 4e-26
sp|Q7V992|CLPP1_PROMM ATP-dependent Clp protease proteolytic sub... 117 4e-26
sp|Q5KVD9|CLPP_GEOKA ATP-dependent Clp protease proteolytic subu... 117 5e-26
sp|A1BI15|CLPP_CHLPD ATP-dependent Clp protease proteolytic subu... 117 5e-26
sp|Q8DLI2|CLPP1_THEEB ATP-dependent Clp protease proteolytic sub... 117 5e-26
sp|Q7UA36|CLPP1_SYNPX ATP-dependent Clp protease proteolytic sub... 117 5e-26
sp|A0Q2L1|CLPP_CLONN ATP-dependent Clp protease proteolytic subu... 116 7e-26
sp|Q660R2|CLPP_BORGA ATP-dependent Clp protease proteolytic subu... 116 9e-26
sp|Q46ID4|CLPP3_PROMT ATP-dependent Clp protease proteolytic sub... 116 9e-26
sp|Q7V9L6|CLPP3_PROMA ATP-dependent Clp protease proteolytic sub... 116 9e-26
sp|Q2JV68|CLPP2_SYNJA ATP-dependent Clp protease proteolytic sub... 116 9e-26
sp|Q2RL31|CLPP_MOOTA ATP-dependent Clp protease proteolytic subu... 115 2e-25
sp|Q8CTE0|CLPP_STAES ATP-dependent Clp protease proteolytic subu... 115 2e-25
sp|Q5HQW0|CLPP_STAEQ ATP-dependent Clp protease proteolytic subu... 115 2e-25
sp|P63786|CLPP_STAAW ATP-dependent Clp protease proteolytic subu... 115 2e-25

>sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic
subunit 3, chloroplastic OS=Arabidopsis thaliana
GN=CLPP3 PE=1 SV=1
Length = 309

Score = 155 bits (392), Expect = 1e-37
Identities = 89/141 (63%), Positives = 106/141 (75%)
Frame = +2

Query: 155 VRSQGHLSLPRTCRISRFNPSSLRRGSCRVQAIAPSPVSVTAPSMSKLNDFDPSSMLLRQ 334
VRS LS P +S S+ S + ++A SP + PS +L D ++MLLRQ
Sbjct: 43 VRSSMSLSKPPRQTLS----SNWDVSSFSIDSVAQSPSRL--PSFEEL---DTTNMLLRQ 93

Query: 335 RIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKAD 514
RI+FLGSQVDD +AD++ISQLLLLDAEDS +DI LFINSPGGS+TAGMGIYDA+K CKAD
Sbjct: 94 RIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKAD 153

Query: 515 VSTVCFGLAASMGAFLLASGT 577
VSTVC GLAASMGAFLLASG+
Sbjct: 154 VSTVCLGLAASMGAFLLASGS 174


>sp|Q8YQX8|CLPP2_ANASP ATP-dependent Clp protease proteolytic
subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=clpP2
PE=3 SV=1
Length = 232

Score = 125 bits (313), Expect = 2e-28
Identities = 71/127 (55%), Positives = 87/127 (68%)
Frame = +2

Query: 197 ISRFNPSSLRRGSCRVQAIAPSPVSVTAPSMSKLNDFDPSSMLLRQRIIFLGSQVDDFSA 376
+SRF SS G + P+ V M + FD S LLR+RIIFLG+ +DD A
Sbjct: 14 LSRFGMSSHLNGIGNIV-----PMVVEQSGMGE-RAFDIYSRLLRERIIFLGTPIDDAVA 67

Query: 377 DVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGA 556
+ I++QLL LDAEDS KDI+L+INSPGGSV AGM IYD I+ + DV T+CFGLAASMGA
Sbjct: 68 NTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGA 127

Query: 557 FLLASGT 577
FLL +GT
Sbjct: 128 FLLTAGT 134


>sp|Q3M726|CLPP3_ANAVT ATP-dependent Clp protease proteolytic
subunit 3 OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=clpP3 PE=3 SV=2
Length = 214

Score = 124 bits (310), Expect = 4e-28
Identities = 62/91 (68%), Positives = 74/91 (81%)
Frame = +2

Query: 305 FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGI 484
FD S LLR+RIIFLG+ +DD A+ I++QLL LDAEDS KDI+L+INSPGGSV AGM I
Sbjct: 26 FDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAI 85

Query: 485 YDAIKLCKADVSTVCFGLAASMGAFLLASGT 577
YD I+ + DV T+CFGLAASMGAFLL +GT
Sbjct: 86 YDTIQQIRPDVVTICFGLAASMGAFLLTAGT 116


>sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic
subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1
Length = 240

Score = 122 bits (306), Expect = 1e-27
Identities = 68/115 (59%), Positives = 84/115 (73%), Gaps = 3/115 (2%)
Frame = +2

Query: 239 RVQAIAPSPVSV-TAPSMSKLND--FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLD 409
++QAIA S V T S + FD S LLR+RI+FLG+ VDD AD I++QLL L+
Sbjct: 27 QIQAIAGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLE 86

Query: 410 AEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASG 574
AED KDI+L+INSPGGSVTAGM IYD ++ DV+T+CFGLAASMGAFLL+ G
Sbjct: 87 AEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGG 141


>sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic
subunit 2 OS=Synechococcus elongatus (strain PCC 7942)
GN=clpP2 PE=3 SV=1
Length = 240

Score = 122 bits (306), Expect = 1e-27
Identities = 68/115 (59%), Positives = 84/115 (73%), Gaps = 3/115 (2%)
Frame = +2

Query: 239 RVQAIAPSPVSV-TAPSMSKLND--FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLD 409
++QAIA S V T S + FD S LLR+RI+FLG+ VDD AD I++QLL L+
Sbjct: 27 QIQAIAGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLE 86

Query: 410 AEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASG 574
AED KDI+L+INSPGGSVTAGM IYD ++ DV+T+CFGLAASMGAFLL+ G
Sbjct: 87 AEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGG 141


>sp|Q3MFR5|CLPP1_ANAVT ATP-dependent Clp protease proteolytic
subunit 1 OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=clpP1 PE=3 SV=1
Length = 204

Score = 122 bits (305), Expect = 2e-27
Identities = 62/91 (68%), Positives = 74/91 (81%)
Frame = +2

Query: 305 FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGI 484
FD S LLR+RIIFLG QVD A++I++QLL LDAED KDI L+INSPGGSVTAGMGI
Sbjct: 17 FDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGI 76

Query: 485 YDAIKLCKADVSTVCFGLAASMGAFLLASGT 577
+D +K + DV T+C GLAASMGAFLL++GT
Sbjct: 77 FDTMKHIRPDVCTICTGLAASMGAFLLSAGT 107


>sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic
subunit 4, chloroplastic OS=Arabidopsis thaliana
GN=CLPP4 PE=1 SV=1
Length = 292

Score = 120 bits (300), Expect = 6e-27
Identities = 63/123 (51%), Positives = 86/123 (69%)
Frame = +2

Query: 209 NPSSLRRGSCRVQAIAPSPVSVTAPSMSKLNDFDPSSMLLRQRIIFLGSQVDDFSADVII 388
+PS LR + ++ +S T S + + D +LLR+RI+FLGS +DDF AD I+
Sbjct: 52 SPSPLRFANASIE------MSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIM 105

Query: 389 SQLLLLDAEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLA 568
SQLLLLDA+D KDIKLFINSPGGS++A M IYD ++L +ADVST+ G+AAS + +L
Sbjct: 106 SQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG 165

Query: 569 SGT 577
+GT
Sbjct: 166 AGT 168


>sp|Q59993|CLPP2_SYNY3 ATP-dependent Clp protease proteolytic
subunit 2 OS=Synechocystis sp. (strain PCC 6803)
GN=clpP2 PE=3 SV=1
Length = 226

Score = 119 bits (299), Expect = 8e-27
Identities = 64/115 (55%), Positives = 80/115 (69%)
Frame = +2

Query: 230 GSCRVQAIAPSPVSVTAPSMSKLNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLD 409
G +Q++ P V + FD S LLR+RIIFLG+ VDD AD I++QLL LD
Sbjct: 16 GGNNIQSVVPMVVEQSGMGERA---FDIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLD 72

Query: 410 AEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASG 574
AED KDI+L+INSPGGSV AG+ IYD ++ + DV T+CFGLAASMGAFLL+ G
Sbjct: 73 AEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGG 127


>sp|Q8YXH5|CLPP1_ANASP ATP-dependent Clp protease proteolytic
subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=clpP1
PE=3 SV=1
Length = 204

Score = 119 bits (299), Expect = 8e-27
Identities = 60/90 (66%), Positives = 73/90 (81%)
Frame = +2

Query: 305 FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGI 484
FD S LLR+RI+FLG QVD A++I++QLL LDAED KDI L+INSPGGSVTAGMGI
Sbjct: 17 FDIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGI 76

Query: 485 YDAIKLCKADVSTVCFGLAASMGAFLLASG 574
+D +K + DV T+C GLAASMGAFLL++G
Sbjct: 77 FDTMKHIRPDVCTICTGLAASMGAFLLSAG 106


>sp|Q0AWF0|CLPP_SYNWW ATP-dependent Clp protease proteolytic subunit
OS=Syntrophomonas wolfei subsp. wolfei (strain
Goettingen) GN=clpP PE=3 SV=1
Length = 200

Score = 119 bits (298), Expect = 1e-26
Identities = 58/90 (64%), Positives = 73/90 (81%)
Frame = +2

Query: 305 FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGI 484
+D S LL+ RIIFLGS +DD A+++I+QLL L+AED KDI L+INSPGGS+TAGM I
Sbjct: 19 YDIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAI 78

Query: 485 YDAIKLCKADVSTVCFGLAASMGAFLLASG 574
YD ++ + DVST+C GLAASMGAFLLA+G
Sbjct: 79 YDTLQYIRPDVSTICVGLAASMGAFLLAAG 108


tr_hit_id A9RYV9
Definition tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Physcomitrella patens subsp. patens
Align length 94
Score (bit) 168.0
E-value 2.0e-40
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952995|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_J14, 5'
(578 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic su... 168 2e-40
tr|A9NRW7|A9NRW7_PICSI ATP-dependent Clp protease proteolytic su... 167 4e-40
tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic su... 167 5e-40
tr|A9T6I1|A9T6I1_PHYPA ATP-dependent Clp protease proteolytic su... 164 2e-39
tr|B6TBU2|B6TBU2_MAIZE ATP-dependent Clp protease proteolytic su... 163 7e-39
tr|A7PR54|A7PR54_VITVI ATP-dependent Clp protease proteolytic su... 162 1e-38
tr|Q5QMT1|Q5QMT1_ORYSJ Putative ATP-dependent Clp protease, prot... 160 5e-38
tr|Q0JMF9|Q0JMF9_ORYSJ ATP-dependent Clp protease proteolytic su... 160 5e-38
tr|A2WQJ7|A2WQJ7_ORYSI ATP-dependent Clp protease proteolytic su... 160 5e-38
tr|B7FH45|B7FH45_MEDTR Putative uncharacterized protein OS=Medic... 158 2e-37
tr|Q8W4Z1|Q8W4Z1_BRAOL ATP-dependent Clp protease proteolytic su... 154 4e-36
tr|Q9M4F0|Q9M4F0_BRANA ATP-dependent Clp protease proteolytic su... 153 6e-36
tr|Q93YL4|Q93YL4_BRANA ATP-dependent Clp protease proteolytic su... 153 6e-36
tr|Q9ST19|Q9ST19_BRACM ATP-dependent Clp protease proteolytic su... 153 8e-36
tr|A8IJ60|A8IJ60_CHLRE ATP-dependent Clp protease proteolytic su... 145 1e-33
tr|A4RXD2|A4RXD2_OSTLU ATP-dependent Clp protease proteolytic su... 143 8e-33
tr|Q019I1|Q019I1_OSTTA ATP-dependent Clp protease proteolytic su... 141 3e-32
tr|A9RE44|A9RE44_PHYPA ATP-dependent Clp protease proteolytic su... 127 3e-28
tr|A5ZXY2|A5ZXY2_9FIRM ATP-dependent Clp protease proteolytic su... 126 8e-28
tr|A9TZR6|A9TZR6_PHYPA ATP-dependent Clp protease proteolytic su... 125 1e-27
tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic su... 125 2e-27
tr|A0YKN7|A0YKN7_9CYAN ATP-dependent Clp protease proteolytic su... 123 8e-27
tr|Q79CM2|Q79CM2_SYNE7 ATP-dependent Clp protease proteolytic su... 122 1e-26
tr|A5KJG9|A5KJG9_9FIRM ATP-dependent Clp protease proteolytic su... 122 1e-26
tr|A8STB1|A8STB1_9FIRM ATP-dependent Clp protease proteolytic su... 122 2e-26
tr|A9KSX0|A9KSX0_CLOPH ATP-dependent Clp protease proteolytic su... 121 3e-26
tr|B5CNY1|B5CNY1_9FIRM Putative uncharacterized protein OS=Rumin... 121 3e-26
tr|A7VEQ4|A7VEQ4_9CLOT ATP-dependent Clp protease proteolytic su... 121 3e-26
tr|A0ZER6|A0ZER6_NODSP ATP-dependent Clp protease proteolytic su... 121 3e-26
tr|Q4C1E0|Q4C1E0_CROWT ATP-dependent Clp protease proteolytic su... 120 5e-26

>tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic
subunit (Fragment) OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_25674 PE=3 SV=1
Length = 205

Score = 168 bits (426), Expect = 2e-40
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = +2

Query: 296 LNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAG 475
L D DP++MLL+QRI+FLGSQVDDFSADVIISQLLLLDA+D TKDIKLFINSPGGSVTAG
Sbjct: 1 LQDLDPATMLLQQRILFLGSQVDDFSADVIISQLLLLDAQDPTKDIKLFINSPGGSVTAG 60

Query: 476 MGIYDAIKLCKADVSTVCFGLAASMGAFLLASGT 577
MGIYDA+KLCKADVSTVCFGLAASMGAFLLA+GT
Sbjct: 61 MGIYDAMKLCKADVSTVCFGLAASMGAFLLAAGT 94


>tr|A9NRW7|A9NRW7_PICSI ATP-dependent Clp protease proteolytic
subunit OS=Picea sitchensis PE=2 SV=1
Length = 341

Score = 167 bits (423), Expect = 4e-40
Identities = 97/155 (62%), Positives = 109/155 (70%), Gaps = 16/155 (10%)
Frame = +2

Query: 161 SQGHLSLPRTCRISRFNPSSLRRGSCRVQAIAPSPV-------------SVTAPS---MS 292
++ LS P C + + +S R+QA+ P+ SV S M
Sbjct: 34 NKNSLSSPPCCFVCSCSSASHLGSRQRMQAVKPNGALSSSRGSLSASLDSVGTSSSLWMP 93

Query: 293 KLNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTA 472
+ D D +SMLLRQRI+FLGSQVDD SAD IISQLLLLD EDSTKDIKLFINSPGGSVTA
Sbjct: 94 RPEDLDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLEDSTKDIKLFINSPGGSVTA 153

Query: 473 GMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGT 577
GMGIYDA+KLCKADVSTVCFGLAASMGAFLLASGT
Sbjct: 154 GMGIYDAMKLCKADVSTVCFGLAASMGAFLLASGT 188


>tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic
subunit OS=Picea sitchensis PE=2 SV=1
Length = 341

Score = 167 bits (422), Expect = 5e-40
Identities = 98/155 (63%), Positives = 109/155 (70%), Gaps = 16/155 (10%)
Frame = +2

Query: 161 SQGHLSLPRTCRISRFNPSSLRRGSCRVQAIAP-------------SPVSVTAPS---MS 292
++ LS P C + + +S R+QA+ P S SV S M
Sbjct: 34 NKNSLSSPPCCFVCSCSSASHLGSRQRMQAVKPIGALSSSRGSLSASLDSVGTSSSLWMP 93

Query: 293 KLNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTA 472
+ D D +SMLLRQRI+FLGSQVDD SAD IISQLLLLD EDSTKDIKLFINSPGGSVTA
Sbjct: 94 RPEDLDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLEDSTKDIKLFINSPGGSVTA 153

Query: 473 GMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGT 577
GMGIYDA+KLCKADVSTVCFGLAASMGAFLLASGT
Sbjct: 154 GMGIYDAMKLCKADVSTVCFGLAASMGAFLLASGT 188


>tr|A9T6I1|A9T6I1_PHYPA ATP-dependent Clp protease proteolytic
subunit OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_141000 PE=3 SV=1
Length = 243

Score = 164 bits (416), Expect = 2e-39
Identities = 80/96 (83%), Positives = 91/96 (94%)
Frame = +2

Query: 290 SKLNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVT 469
++L D DP +MLL+QRI+FLGSQVDDFSAD+IISQ+LLLDA+D T+DIKLFINSPGGSVT
Sbjct: 14 ARLQDLDPGTMLLQQRILFLGSQVDDFSADLIISQMLLLDAQDPTRDIKLFINSPGGSVT 73

Query: 470 AGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGT 577
AGMGIYDA+KLCKADVSTVCFGLAASMGAFLL +GT
Sbjct: 74 AGMGIYDAMKLCKADVSTVCFGLAASMGAFLLTAGT 109


>tr|B6TBU2|B6TBU2_MAIZE ATP-dependent Clp protease proteolytic
subunit 1 OS=Zea mays PE=2 SV=1
Length = 285

Score = 163 bits (412), Expect = 7e-39
Identities = 83/109 (76%), Positives = 95/109 (87%), Gaps = 2/109 (1%)
Frame = +2

Query: 257 PSPVSVTAPSMSK--LNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKD 430
PS ++V P+ K L + D ++MLLRQRI+FLGS VDD SAD+IISQLLLLDAED TKD
Sbjct: 54 PSRLAVARPAARKACLEELDTTNMLLRQRIVFLGSPVDDTSADLIISQLLLLDAEDQTKD 113

Query: 431 IKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGT 577
IKLFINSPGGS+TAGMG+YDA+K CKADVSTVCFGLAASMGAFLLA+GT
Sbjct: 114 IKLFINSPGGSITAGMGVYDAMKFCKADVSTVCFGLAASMGAFLLAAGT 162


>tr|A7PR54|A7PR54_VITVI ATP-dependent Clp protease proteolytic
subunit OS=Vitis vinifera GN=GSVIVT00022336001 PE=3 SV=1
Length = 320

Score = 162 bits (410), Expect = 1e-38
Identities = 94/157 (59%), Positives = 109/157 (69%), Gaps = 8/157 (5%)
Frame = +2

Query: 131 NRFLAAERVRSQGHLSLPRTCRISR-------FNPSSLRRGSCRVQAIAPSPVSVTAPS- 286
+R L R S L LP T R SR SS R + S S +AP+
Sbjct: 14 SRPLCFNRSPSSSSLWLPSTSRSSRKGRAVSMVKASSASRPTLASNWDLSSLQSASAPTW 73

Query: 287 MSKLNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSV 466
+ + D D ++MLLRQRI+FLGSQVDD +AD++ISQLL LDAED KDIKLFINSPGGSV
Sbjct: 74 LPRFEDLDTTNMLLRQRIVFLGSQVDDMTADLVISQLLFLDAEDQEKDIKLFINSPGGSV 133

Query: 467 TAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGT 577
TAG+GIYDA+KLCKADVSTVC GLAASMGAFLLASG+
Sbjct: 134 TAGLGIYDAMKLCKADVSTVCLGLAASMGAFLLASGS 170


>tr|Q5QMT1|Q5QMT1_ORYSJ Putative ATP-dependent Clp protease,
proteolytic subunit (Putative uncharacterized protein)
OS=Oryza sativa subsp. japonica GN=OSJNBa0094H06.31 PE=4
SV=1
Length = 308

Score = 160 bits (405), Expect = 5e-38
Identities = 82/125 (65%), Positives = 97/125 (77%)
Frame = +2

Query: 203 RFNPSSLRRGSCRVQAIAPSPVSVTAPSMSKLNDFDPSSMLLRQRIIFLGSQVDDFSADV 382
R + S+ RR + + A +L + D ++MLLRQRI+FLGS VDD SAD+
Sbjct: 36 RASASAARRTLSSAWELPGPSAARPAARKPRLEELDTTNMLLRQRIVFLGSPVDDMSADL 95

Query: 383 IISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFL 562
IISQLLLLDAED TKDIKLFINSPGGS+TAGMG+YDA+K CKAD+STVCFGLAASMGAFL
Sbjct: 96 IISQLLLLDAEDKTKDIKLFINSPGGSITAGMGVYDAMKFCKADISTVCFGLAASMGAFL 155

Query: 563 LASGT 577
LA+GT
Sbjct: 156 LAAGT 160


>tr|Q0JMF9|Q0JMF9_ORYSJ ATP-dependent Clp protease proteolytic
subunit OS=Oryza sativa subsp. japonica GN=Os01g0507900
PE=2 SV=1
Length = 314

Score = 160 bits (405), Expect = 5e-38
Identities = 82/125 (65%), Positives = 97/125 (77%)
Frame = +2

Query: 203 RFNPSSLRRGSCRVQAIAPSPVSVTAPSMSKLNDFDPSSMLLRQRIIFLGSQVDDFSADV 382
R + S+ RR + + A +L + D ++MLLRQRI+FLGS VDD SAD+
Sbjct: 42 RASASAARRTLSSAWELPGPSAARPAARKPRLEELDTTNMLLRQRIVFLGSPVDDMSADL 101

Query: 383 IISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFL 562
IISQLLLLDAED TKDIKLFINSPGGS+TAGMG+YDA+K CKAD+STVCFGLAASMGAFL
Sbjct: 102 IISQLLLLDAEDKTKDIKLFINSPGGSITAGMGVYDAMKFCKADISTVCFGLAASMGAFL 161

Query: 563 LASGT 577
LA+GT
Sbjct: 162 LAAGT 166


>tr|A2WQJ7|A2WQJ7_ORYSI ATP-dependent Clp protease proteolytic
subunit OS=Oryza sativa subsp. indica GN=OsI_02123 PE=3
SV=1
Length = 308

Score = 160 bits (405), Expect = 5e-38
Identities = 82/125 (65%), Positives = 97/125 (77%)
Frame = +2

Query: 203 RFNPSSLRRGSCRVQAIAPSPVSVTAPSMSKLNDFDPSSMLLRQRIIFLGSQVDDFSADV 382
R + S+ RR + + A +L + D ++MLLRQRI+FLGS VDD SAD+
Sbjct: 36 RASASAARRTLSSAWELPGPSAARPAARKPRLEELDTTNMLLRQRIVFLGSPVDDMSADL 95

Query: 383 IISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFL 562
IISQLLLLDAED TKDIKLFINSPGGS+TAGMG+YDA+K CKAD+STVCFGLAASMGAFL
Sbjct: 96 IISQLLLLDAEDKTKDIKLFINSPGGSITAGMGVYDAMKFCKADISTVCFGLAASMGAFL 155

Query: 563 LASGT 577
LA+GT
Sbjct: 156 LAAGT 160


>tr|B7FH45|B7FH45_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 297

Score = 158 bits (400), Expect = 2e-37
Identities = 77/100 (77%), Positives = 89/100 (89%)
Frame = +2

Query: 278 APSMSKLNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPG 457
+P + K + D ++MLLRQRI+FLGSQVDD +AD +ISQLL LDA+D TKDIKLFINSPG
Sbjct: 69 SPWLPKFEELDTTNMLLRQRIVFLGSQVDDMTADFVISQLLFLDADDPTKDIKLFINSPG 128

Query: 458 GSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGT 577
GSVTAGMG+YDA+KLCKADVSTVC GLAASMGAFLLA+GT
Sbjct: 129 GSVTAGMGVYDAMKLCKADVSTVCLGLAASMGAFLLAAGT 168