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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953018
Clone id TST38A01NGRL0015_K14
Library
Length 604
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_K14. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GCCTATAAGTCAGAGCTTGCCCTGTTTCAGAAAATGCAAGCTCTGGATGACATGGTTCTG
AAGGAGGCATCTGCACTTGGCTTGCACCAGGCAAACTCTAGCCTGAAGCTTCAGCTACAA
GCTGCTACTAGTGAGATTCAGAGGCTTGAAGCCCAAGTTAAAGCTGTCTCTGTGAGGGCT
GAAGCAGCCGAGTTACGCGCCTTGGCAGCTGATGAAGCTCTCAAAAACTTCCAAGAAATG
GCTGATCGCAATGCACAGGAGCACGAAGAGAGTGCAAAAAGAGCATTAGAGGCCCTCAAG
CTTGCGGGTGCCACTCGCTTAGAAGCCGCCCGGGCAGCATTCAAAGCTGATATTGATGCC
CTTCAGGCTGCATTAAATACGGTTCACAAAGCAGAGAAGTCACAGGAACAAGCATACGCA
AGAAGATATCAGGCCTTGGAGCGGTCCCTAGCTTCAAGCGAAGCATTGGCAAAAGCATGG
GAAGAGAGGGCCTGTGCCGTTGAAGACTTGCTCAAAAATTCCAGCCAACTTTCTGGAGGT
AACGATTCTGTGCTTTCCGGAGGTCGCATGGAGACACTGCTGGGCAATGATTCAAAGAAA
TGGA
■■Homology search results ■■ -
sp_hit_id Q28034
Definition sp|Q28034|GLU2B_BOVIN Glucosidase 2 subunit beta OS=Bos taurus
Align length 76
Score (bit) 30.4
E-value 7.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953018|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_K14, 5'
         (604 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q28034|GLU2B_BOVIN Glucosidase 2 subunit beta OS=Bos taurus G...    30   7.3  
sp|Q9ULL4|PLXB3_HUMAN Plexin-B3 OS=Homo sapiens GN=PLXNB3 PE=1 SV=2    30   9.4  
sp|Q8CJ96|RASF8_MOUSE Ras association domain-containing protein ...    30   9.5  

>sp|Q28034|GLU2B_BOVIN Glucosidase 2 subunit beta OS=Bos taurus
           GN=PRKCSH PE=2 SV=1
          Length = 533

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
 Frame = +1

Query: 388 KAEKSQEQAYARRYQALERSLASSEALAKAWEER------ACAVEDLLKNSSQLSGGNDS 549
           +A K Q +      QA+ +     E  A A++E       A +V +L +   +L    D 
Sbjct: 187 EAAKDQHRRLWEEQQAISKEQRERELAASAFQELDDDMDGAVSVAEL-QTHPELDTDGDG 245

Query: 550 VLSGGRMETLLGNDSK 597
            LS G  +TLLG D++
Sbjct: 246 ALSEGEAQTLLGGDAQ 261


>sp|Q9ULL4|PLXB3_HUMAN Plexin-B3 OS=Homo sapiens GN=PLXNB3 PE=1 SV=2
          Length = 1909

 Score = 30.0 bits (66), Expect = 9.4
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 18   CPVSENASSG*HGSEGGICTW-LAPGKL*PEASATSC 125
            CP+ EN  +   G EGG+C W L      PE +   C
Sbjct: 1638 CPLGENIPTLEDGEEGGVCLWHLVKATEEPEGAKVRC 1674


>sp|Q8CJ96|RASF8_MOUSE Ras association domain-containing protein 8
           OS=Mus musculus GN=Rassf8 PE=1 SV=1
          Length = 419

 Score = 30.0 bits (66), Expect = 9.5
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 424 RYQALERSLASSEALAKAWEER-ACAVEDLLKNSSQLSGGND 546
           + QA+E+ L SSEA  + WE++ +C++E+ +    Q    ND
Sbjct: 176 KLQAIEKQLESSEAEIRFWEQKYSCSLEEEIVRLEQRIKRND 217
tr_hit_id A7PA92
Definition tr|A7PA92|A7PA92_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera
Align length 204
Score (bit) 79.7
E-value 1.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953018|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_K14, 5'
         (604 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PA92|A7PA92_VITVI Chromosome chr14 scaffold_9, whole genome...    80   1e-13
tr|Q5RGI5|Q5RGI5_DANRE Novel protein similar to human chromosome...    36   2.0  
tr|Q00VF6|Q00VF6_OSTTA Chromosome 15 contig 1, DNA sequence OS=O...    36   2.0  
tr|A8X0F3|A8X0F3_CAEBR CBR-SRE-21 protein OS=Caenorhabditis brig...    35   2.6  
tr|B1S9S4|B1S9S4_9BIFI Putative uncharacterized protein OS=Bifid...    34   5.8  
tr|B6MUX9|B6MUX9_BRAFL Putative uncharacterized protein OS=Branc...    34   5.8  
tr|A8XPF5|A8XPF5_CAEBR CBR-HCP-2 protein OS=Caenorhabditis brigg...    34   5.8  
tr|A4HWM1|A4HWM1_LEIIN Putative uncharacterized protein OS=Leish...    34   7.6  
tr|A7MIW8|A7MIW8_ENTS8 Putative uncharacterized protein OS=Enter...    33   9.9  
tr|Q972P4|Q972P4_SULTO Putative uncharacterized protein ST1088 O...    33   9.9  

>tr|A7PA92|A7PA92_VITVI Chromosome chr14 scaffold_9, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038019001
           PE=4 SV=1
          Length = 851

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
 Frame = +1

Query: 1   AYKSELALFQKMQALDDMVLKEASALGLHQANSSLKLQLQAATSEIQRLEAQVKAVSVXX 180
           A KS  A        D++   ++  + L  A ++L+ QL    SEI +L+ +++      
Sbjct: 142 ATKSVAAFTDATSPADEIAAIQSQNIELQNATNNLESQLLLTRSEIDKLKLELEQAHAKA 201

Query: 181 XXXXXXXXXXXXXXKNFQE-MADRNAQEHEESAKRALEALKLXXXXXXXXXXXXXXXXXX 357
                           FQE M ++N Q+ EE  KR LE +K                   
Sbjct: 202 NASELRANAAEKALLEFQESMKEQNLQQQEEM-KRLLEKVKKDAAEKKKAASKAFKLELE 260

Query: 358 XLQAALNTVHKAEKSQEQAYARRYQALERSLASSEALAKAWEERACAVEDLLKNSSQLSG 537
            ++AA+    +   S+++AY+RR +AL RSL +SEA    W +RA   E LL      S 
Sbjct: 261 SIKAAIEAAKETAHSKDEAYSRRCEALHRSLRASEAALAMWRQRAEMAESLLLKEKPFSE 320

Query: 538 GNDS---VLSGGRMETLLGNDSKK 600
           G++    V++GGR++ L  +DS+K
Sbjct: 321 GDEDAIFVVNGGRIDLLTDDDSQK 344


>tr|Q5RGI5|Q5RGI5_DANRE Novel protein similar to human chromosome 11
           open reading frame 23 (C11orf23) OS=Danio rerio
           GN=si:dkey-159a18.3 PE=2 SV=1
          Length = 878

 Score = 35.8 bits (81), Expect = 2.0
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = +1

Query: 409 QAYARRYQALERSLASSEALAKAWEERACAVEDLLKNSSQLSGGNDSVLSGGRMET 576
           Q   +  Q  E++LASS++   AWEE +     L+ + S  SGG+DS    G  +T
Sbjct: 758 QTEGQPQQGEEKNLASSDSATGAWEESSGQKAPLVASDSSSSGGSDSEEDPGENKT 813


>tr|Q00VF6|Q00VF6_OSTTA Chromosome 15 contig 1, DNA sequence
           OS=Ostreococcus tauri GN=Ot15g00530 PE=4 SV=1
          Length = 389

 Score = 35.8 bits (81), Expect = 2.0
 Identities = 49/205 (23%), Positives = 76/205 (37%), Gaps = 6/205 (2%)
 Frame = +1

Query: 1   AYKSELALFQKMQALDDMVLKEASALGLHQANSSLKLQLQAATSEIQRLEAQVKAVSVXX 180
           A  +EL   +K +       +EA+A    +  ++ K + +AA ++     A  KA     
Sbjct: 143 AKAAELEEMKKAEEAKAKAEEEAAAAKAAEEAAAKKAKEEAAAAKAAEEAAAKKAKEEAA 202

Query: 181 XXXXXXXXXXXXXXKNFQEMADRNAQEHEESAKRALEALKLXXXXXXXXXXXXXXXXXXX 360
                            +  A + A+E   +AK A EA                      
Sbjct: 203 AAAKAAEEAAKKAEDEAKAAASKKAEEEAAAAKAAEEAKAAAEEAAKKAEERATRAASKA 262

Query: 361 LQAALNTVHKAEKSQEQAYARRYQALERSLASSEALAKAWEERACAVEDLLKN------S 522
            + A     KAEK   +A A   +A E + A+SEA  +A EER  A  + L         
Sbjct: 263 KEEAEAAAKKAEKEAAEAAAAHQKAEEEAKAASEAAMRAEEERKKAENNSLIAVPFKIFG 322

Query: 523 SQLSGGNDSVLSGGRMETLLGNDSK 597
             LS G  +V + G+  T+ G D K
Sbjct: 323 KALSIGASAVNAVGK--TVTGGDKK 345


>tr|A8X0F3|A8X0F3_CAEBR CBR-SRE-21 protein OS=Caenorhabditis
           briggsae GN=Cbr-sre-21 PE=4 SV=2
          Length = 1067

 Score = 35.4 bits (80), Expect = 2.6
 Identities = 47/170 (27%), Positives = 66/170 (38%)
 Frame = +1

Query: 13  ELALFQKMQALDDMVLKEASALGLHQANSSLKLQLQAATSEIQRLEAQVKAVSVXXXXXX 192
           +LA  Q+  AL     + A A    QAN S +   QA + +  + EA +KA         
Sbjct: 453 QLAKAQQAAALQAAAARVAQAQSQAQANQSQQQAQQAQSQQQAQQEAALKAAQ------- 505

Query: 193 XXXXXXXXXXKNFQEMADRNAQEHEESAKRALEALKLXXXXXXXXXXXXXXXXXXXLQAA 372
                     K  Q+ A   AQE ++ A+   EALK                        
Sbjct: 506 -------EQAKKAQQEALARAQEAQKKAQE--EALK------------------------ 532

Query: 373 LNTVHKAEKSQEQAYARRYQALERSLASSEALAKAWEERACAVEDLLKNS 522
                KA+ +Q+QA A    A  +  A  EALAKA E +  A+ED  K +
Sbjct: 533 -----KAQAAQQQAQAH---AEAQKKAQQEALAKAQEAQKNALEDARKKA 574


>tr|B1S9S4|B1S9S4_9BIFI Putative uncharacterized protein
           OS=Bifidobacterium dentium ATCC 27678 GN=BIFDEN_01071
           PE=4 SV=1
          Length = 287

 Score = 34.3 bits (77), Expect = 5.8
 Identities = 35/171 (20%), Positives = 61/171 (35%)
 Frame = +1

Query: 82  LHQANSSLKLQLQAATSEIQRLEAQVKAVSVXXXXXXXXXXXXXXXXKNFQEMADRNAQE 261
           +HQ    LK  L  A    ++L                         + + E A +N QE
Sbjct: 58  VHQTGQQLKTDLDTAKQHAEQLHQNAH--------------DDADALRQYSEQAWKNYQE 103

Query: 262 HEESAKRALEALKLXXXXXXXXXXXXXXXXXXXLQAALNTVHKAEKSQEQAYARRYQALE 441
             E  K AL+                        QA LN +H   +    A   ++ +L 
Sbjct: 104 DREDIKTALDGAS----KRGQEVHDTLHQDAQDTQAHLNQLHTDLQEDHAALKTQHDSL- 158

Query: 442 RSLASSEALAKAWEERACAVEDLLKNSSQLSGGNDSVLSGGRMETLLGNDS 594
             +A+ +   K++ +     ++ L  +   SG N +  +G  ++T+ GNDS
Sbjct: 159 --VAARQEWHKSFIQALKDTQNGLSGTGTTSGANSAASNGTAVQTVSGNDS 207


>tr|B6MUX9|B6MUX9_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_87034 PE=4 SV=1
          Length = 1880

 Score = 34.3 bits (77), Expect = 5.8
 Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1    AYKSELALFQKMQALDDMVLKEASALGLHQAN-----SSLKLQLQAATSEIQRLEAQVKA 165
            A  SEL+   K+Q   + V +E +AL    ++     S L+LQL+    E   LE Q+K 
Sbjct: 1180 ALSSELSS-TKLQVSYERVKEEKTALSSELSSTRLQFSQLQLQLEGVIQERSHLEEQLKD 1238

Query: 166  VSVXXXXXXXXXXXXXXXXKNFQEMADRNAQEHEESAKRALEALKLXXXXXXXXXXXXXX 345
            + V                   Q+MAD     H+E  K+  + LKL              
Sbjct: 1239 MQVKQHNQSAVA----------QKMADLQTSSHQELGKQKAKVLKLG------------- 1275

Query: 346  XXXXXLQAALNTVHKAEKSQEQAYARRYQALERSL 450
                     LNT H+  ++++ +Y      L   L
Sbjct: 1276 -------TELNTAHQELQARQSSYENTVSLLTSKL 1303


>tr|A8XPF5|A8XPF5_CAEBR CBR-HCP-2 protein OS=Caenorhabditis briggsae
           GN=Cbr-hcp-2 PE=4 SV=2
          Length = 1345

 Score = 34.3 bits (77), Expect = 5.8
 Identities = 39/173 (22%), Positives = 64/173 (36%), Gaps = 16/173 (9%)
 Frame = +1

Query: 82  LHQANSSLKLQLQAATSEIQRLEAQVKAVSVXXXXXXXXXXXXXXXXKNFQEMADRNAQE 261
           L   N  + LQL  A SE++ L+ ++  VSV                 +  E+ D   +E
Sbjct: 342 LESNNVEIHLQLTNAKSEVEELKQKLIEVSVRAEEEAGRVSNNEP---SSTEIIDELKKE 398

Query: 262 HEESAKRALEALKLXXXXXXXXXXXXXXXXXXX-------------LQAALNTVHKAEKS 402
           HEE     +E ++                                 L+A +N +++  K 
Sbjct: 399 HEEIRSMLMEEIRRLESENSNFQLRNPTENIENQRLLSEKLSLEQQLEAKINYINEELKK 458

Query: 403 QEQAYARRYQ---ALERSLASSEALAKAWEERACAVEDLLKNSSQLSGGNDSV 552
            E   A   +   ALE S  +SE L ++ EE+   ++ L+   S L    D V
Sbjct: 459 SEMFNAHIQELTAALEVSQTNSETLKQSLEEKEAKIQALIDEMSSLQKSTDGV 511


>tr|A4HWM1|A4HWM1_LEIIN Putative uncharacterized protein
           OS=Leishmania infantum GN=LinJ15.1290 PE=4 SV=1
          Length = 303

 Score = 33.9 bits (76), Expect = 7.6
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +1

Query: 418 ARRYQALERSLASSEALAKAWEERACAVEDLLKNSSQLSGGNDSVLSGGRMETLL 582
           A   QAL +++ + EA  +    R  A E LL+++ +L   NDS+ S G +E L+
Sbjct: 30  ASTVQALRQAVEAQEAHVRLLRARQAAREALLRHTRRLLAANDSIESPGSVEQLV 84


>tr|A7MIW8|A7MIW8_ENTS8 Putative uncharacterized protein
           OS=Enterobacter sakazakii (strain ATCC BAA-894)
           GN=ESA_02606 PE=4 SV=1
          Length = 412

 Score = 33.5 bits (75), Expect = 9.9
 Identities = 44/185 (23%), Positives = 65/185 (35%), Gaps = 7/185 (3%)
 Frame = +1

Query: 31  KMQALDDMVLKEASALGLHQANSSLKLQLQAATSEIQRLEAQVKAVSVXXXXXXXXXXXX 210
           + QA      +EA+     Q   + +   +AA     + +AQ KA               
Sbjct: 119 QQQAEQQKQAEEAAKRAQEQQKQAEEAAAKAAADAKAKADAQAKAAEEAAKKAAADAQKK 178

Query: 211 XXXXKNFQEMADRNAQEHEESAKRALEALKLXXXXXXXXXXXXXXXXXXXLQAALNTVHK 390
                     A + AQE  E  K A +A K                     +AA      
Sbjct: 179 AQEEAAKAAAAAKKAQEEAEK-KAAADAAKKAQQDAEKKAAAEAAKKAAAEKAAAAEKAA 237

Query: 391 AEK-------SQEQAYARRYQALERSLASSEALAKAWEERACAVEDLLKNSSQLSGGNDS 549
           AEK       + E+A A +  A E++ A   A AKA  E+A A E +      LS G ++
Sbjct: 238 AEKKAAAEKAAAEKAAADKKAAAEKAAAKKAAAAKAAAEKAAAAEGVDDLLGDLSSGKNA 297

Query: 550 VLSGG 564
             +GG
Sbjct: 298 PKTGG 302


>tr|Q972P4|Q972P4_SULTO Putative uncharacterized protein ST1088
           OS=Sulfolobus tokodaii GN=ST1088 PE=4 SV=1
          Length = 337

 Score = 33.5 bits (75), Expect = 9.9
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 4/167 (2%)
 Frame = +1

Query: 28  QKMQALDDMVLKEASAL-GLHQANSSLKLQLQAATSEIQRLEAQVKAVSVXXXXXXXXXX 204
           + ++AL + + K   A+  L QA  SL+  +   T  IQ L+   K  S           
Sbjct: 41  ESIRALQEEIKKHTEAIQALQQAIQSLQETVDKHTEAIQALQEIAKKQS-------EAIV 93

Query: 205 XXXXXXKNFQEMADRNAQ---EHEESAKRALEALKLXXXXXXXXXXXXXXXXXXXLQAAL 375
                 ++ QE  D++ Q     +E+ K+  EA++                    LQ A+
Sbjct: 94  SLQQAVQSLQETVDKHTQAIISLQETVKKQGEAIQ-----SLQETVDKHTEAIQALQQAI 148

Query: 376 NTVHKAEKSQEQAYARRYQALERSLASSEALAKAWEERACAVEDLLK 516
            ++ +  K Q +A      A+++   + EAL +A  +R  A+E L K
Sbjct: 149 QSLQETVKKQGEAIVSLQDAVKKQGEAIEALQEAVRKRGEAIEALQK 195