DK953024
Clone id TST38A01NGRL0015_K20
Library
Length 612
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_K20. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GCGTGAATCAGGCGAGGAAGAGGAAGCAAATCGAGGCAATGGCCACAGCTACTTCTGCAT
TGAGTAGCTCTACCTTTGCAGGGCAGACCGCTCTGAAGCCTCAGAACGAGCTGTCCAAGA
GGGTGGGCAATGTGGAGGCTCGGGTGAGCATGAGGAGGACCGTGAAGAGCACTCCAGAGA
GCATCTGGTATGGTCCAGATCGCCCTAAGTACCTGGGCCCCTTCTCCGAGGCCACTCCCT
CTTACCTGACCGGTGAGTTCCCCGGTGATTACGGCTGGGACACCGCCGGCCTGTCTGCCG
ACCCCGAGACCTTCGCGAAGAACCGCGAGCTGGAGGTCATTCATGCCAGGTGGGCAATGT
TGGGCGCCCTCGGGTGTGTGACCCCTGAGCTGTTGGCTAAGAACGGCGTGAAGTTTGGTG
AGGCAGTGTGGTTCAAGGCTGGCTCTCAAATCTTCGCTGACGGAGGGTTGGACTACTTGG
GCAACCCCAGCTTGGTGCACGCTCAGAGCATTTTGGCCATCTGGGCATGTCAGGTTGTGC
TGATGGGCGCTGTTGAGGGTTACAGAGTTGGCGGCGGCCCCCTCGGCGAGGGCCTGGACC
CCATCTACCCCG
■■Homology search results ■■ -
sp_hit_id P12332
Definition sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis
Align length 179
Score (bit) 340.0
E-value 3.0e-93
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953024|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_K20, 5'
(612 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas... 340 3e-93
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 327 4e-89
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 323 6e-88
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 322 1e-87
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 321 2e-87
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 321 2e-87
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 318 1e-86
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop... 317 3e-86
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas... 311 1e-84
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas... 311 1e-84
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 308 1e-83
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 305 2e-82
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 298 1e-80
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 290 5e-78
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 289 9e-78
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 286 4e-77
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 286 4e-77
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 285 1e-76
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 285 1e-76
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 285 2e-76
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 283 4e-76
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 283 5e-76
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 283 5e-76
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 283 5e-76
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 283 6e-76
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 283 6e-76
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 282 8e-76
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 282 8e-76
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 282 8e-76
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 281 1e-75

>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
(Fragment) OS=Silene pratensis PE=2 SV=2
Length = 205

Score = 340 bits (872), Expect = 3e-93
Identities = 161/179 (89%), Positives = 167/179 (93%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
FAGQT LKPQNEL ++VG RVSMRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11 FAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWF 130

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
KAGSQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLD +YP
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYP 189


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
Length = 265

Score = 327 bits (837), Expect = 4e-89
Identities = 156/180 (86%), Positives = 165/180 (91%), Gaps = 1/180 (0%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
FAGQTALK NEL ++G V RVSMRRTVKS P SIWYGPDRPKYLGPFS+ PSYLT
Sbjct: 11 FAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDPIYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYP 190


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
chloroplastic OS=Pinus thunbergii PE=2 SV=1
Length = 266

Score = 323 bits (827), Expect = 6e-88
Identities = 150/179 (83%), Positives = 165/179 (92%), Gaps = 1/179 (0%)
Frame = +3

Query: 78 AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
AGQT L+PQ NEL K+VG +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13 AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
EFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWF
Sbjct: 73 EFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWF 132

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
KAG+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVGGG LGEGLDP+ P
Sbjct: 133 KAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLP 191


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
I, chloroplastic OS=Lemna gibba PE=3 SV=1
Length = 264

Score = 322 bits (824), Expect = 1e-87
Identities = 149/179 (83%), Positives = 167/179 (93%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
FAGQTALK ++EL ++VG + R SMRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTG
Sbjct: 11 FAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTG 70

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWF 130

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
KAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YP
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYP 189


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
Length = 265

Score = 321 bits (823), Expect = 2e-87
Identities = 152/180 (84%), Positives = 163/180 (90%), Gaps = 1/180 (0%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
F GQ K QNE ++VGN E R++MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11 FVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
FKAGSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYP 190


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
Length = 265

Score = 321 bits (822), Expect = 2e-87
Identities = 150/180 (83%), Positives = 165/180 (91%), Gaps = 1/180 (0%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
FAGQTALK QNEL +++G+ R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
FKAGSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYP 190


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
Length = 265

Score = 318 bits (816), Expect = 1e-86
Identities = 151/180 (83%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
FAGQTALK QNEL +++G+ R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGV FGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYP 190


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
Length = 265

Score = 317 bits (812), Expect = 3e-86
Identities = 150/180 (83%), Positives = 162/180 (90%), Gaps = 1/180 (0%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
F G+T L+ NE ++ GN +AR +MRRTVKS PESIWYGPDRPKYLGPFSE PSYLT
Sbjct: 11 FTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
GEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGC PELL KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
FKAGSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYP 190


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263

Score = 311 bits (798), Expect = 1e-84
Identities = 144/170 (84%), Positives = 160/170 (94%)
Frame = +3

Query: 102 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 281
++EL +RVG+ R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19 RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 282 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 461
TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79 TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 462 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YP
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYP 188



Score = 30.8 bits (68), Expect = 5.7
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3

Query: 216 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 395
GP E L +PG +D GL+ DP+TFA+ + E+ + R AM G ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 396 AKNG 407
G
Sbjct: 232 TGKG 235


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263

Score = 311 bits (798), Expect = 1e-84
Identities = 144/170 (84%), Positives = 160/170 (94%)
Frame = +3

Query: 102 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 281
++EL +RVG+ R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19 RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 282 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 461
TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79 TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 462 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YP
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYP 188



Score = 30.8 bits (68), Expect = 5.7
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3

Query: 216 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 395
GP E L +PG +D GL+ DP+TFA+ + E+ + R AM G ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 396 AKNG 407
G
Sbjct: 232 TGKG 235


tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 179
Score (bit) 334.0
E-value 2.0e-90
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953024|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_K20, 5'
(612 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ... 334 2e-90
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu... 331 2e-89
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote... 330 4e-89
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ... 329 7e-89
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos... 329 7e-89
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti... 328 1e-88
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran... 328 1e-88
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=... 328 2e-88
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=... 328 2e-88
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ... 328 2e-88
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v... 328 2e-88
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea... 328 2e-88
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea... 327 3e-88
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ... 327 3e-88
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ... 327 4e-88
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b... 326 6e-88
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ... 326 6e-88
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea... 326 6e-88
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea... 325 1e-87
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea... 325 1e-87
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea... 325 1e-87
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ... 324 2e-87
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul... 324 3e-87
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul... 324 3e-87
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea... 322 8e-87
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 320 3e-86
tr|Q93YG3|Q93YG3_SOYBN Chlorophyll a/b binding protein type II O... 320 5e-86
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti... 318 1e-85
tr|Q41449|Q41449_SOLTU Chlorophyll a,b binding protein type I OS... 318 2e-85
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 318 2e-85

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
thunbergii GN=cab PE=4 SV=1
Length = 266

Score = 334 bits (857), Expect = 2e-90
Identities = 155/179 (86%), Positives = 169/179 (94%), Gaps = 1/179 (0%)
Frame = +3

Query: 78 AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
AGQT L+PQ NEL K+VG +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13 AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWF
Sbjct: 73 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWF 132

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YP
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYP 191


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
Length = 264

Score = 331 bits (849), Expect = 2e-89
Identities = 156/179 (87%), Positives = 165/179 (92%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
FAGQTALK QNEL +RVG+ R MRRT STP+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11 FAGQTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWF 130

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYP 189


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
OS=Pachysandra terminalis PE=2 SV=1
Length = 264

Score = 330 bits (846), Expect = 4e-89
Identities = 154/178 (86%), Positives = 166/178 (93%)
Frame = +3

Query: 78 AGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGE 257
AG+TALK QNEL K+VG R+SM RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGE
Sbjct: 12 AGRTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 258 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 437
FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 131

Query: 438 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
AG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYP
Sbjct: 132 AGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYP 189


>tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax
ginseng GN=cab PE=2 SV=1
Length = 265

Score = 329 bits (844), Expect = 7e-89
Identities = 155/180 (86%), Positives = 170/180 (94%), Gaps = 1/180 (0%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
FAGQTALKPQNEL +++G++ R++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+LA+NGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILARNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
FKAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYP 190


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
chr12 scaffold_47, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
Length = 265

Score = 329 bits (844), Expect = 7e-89
Identities = 156/180 (86%), Positives = 168/180 (93%), Gaps = 1/180 (0%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
FAGQTALK NEL ++VG + R++MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
FKAG+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYP 190


>tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesting
chlorophyll a/b-binding protein) OS=Arabidopsis thaliana
GN=Lhcb2:4 PE=2 SV=1
Length = 266

Score = 328 bits (842), Expect = 1e-88
Identities = 151/181 (83%), Positives = 168/181 (92%), Gaps = 2/181 (1%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVG--NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYL 248
FAGQT LKP N+L +++G N R+ MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYL
Sbjct: 11 FAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYL 70

Query: 249 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 428
TGE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC PE+L+KNGVKFGEAV
Sbjct: 71 TGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAV 130

Query: 429 WFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIY 608
WFKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYR+GGGPLGEGLDP+Y
Sbjct: 131 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGGGPLGEGLDPLY 190

Query: 609 P 611
P
Sbjct: 191 P 191


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
Length = 264

Score = 328 bits (841), Expect = 1e-88
Identities = 153/179 (85%), Positives = 164/179 (91%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
F GQT LK QNEL ++VG R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11 FVGQTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
EFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
KAGSQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYP
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYP 189


>tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana
GN=Lhcb2.3 PE=2 SV=1
Length = 265

Score = 328 bits (840), Expect = 2e-88
Identities = 153/180 (85%), Positives = 169/180 (93%), Gaps = 1/180 (0%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
FAGQTALKP NEL ++VG + RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC PE+L+KNGVKFGEAVW
Sbjct: 71 GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190


>tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana
GN=Lhcb2.1 PE=2 SV=1
Length = 265

Score = 328 bits (840), Expect = 2e-88
Identities = 153/180 (85%), Positives = 169/180 (93%), Gaps = 1/180 (0%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
FAGQTALKP NEL ++VG + RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC PE+L+KNGVKFGEAVW
Sbjct: 71 GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190


>tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein
(At2g05100/F15L11.2) OS=Arabidopsis thaliana
GN=At2g05100 PE=2 SV=1
Length = 265

Score = 328 bits (840), Expect = 2e-88
Identities = 153/180 (85%), Positives = 169/180 (93%), Gaps = 1/180 (0%)
Frame = +3

Query: 75 FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
FAGQTALKP NEL ++VG + RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC PE+L+KNGVKFGEAVW
Sbjct: 71 GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190