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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953024
Clone id TST38A01NGRL0015_K20
Library
Length 612
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_K20. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GCGTGAATCAGGCGAGGAAGAGGAAGCAAATCGAGGCAATGGCCACAGCTACTTCTGCAT
TGAGTAGCTCTACCTTTGCAGGGCAGACCGCTCTGAAGCCTCAGAACGAGCTGTCCAAGA
GGGTGGGCAATGTGGAGGCTCGGGTGAGCATGAGGAGGACCGTGAAGAGCACTCCAGAGA
GCATCTGGTATGGTCCAGATCGCCCTAAGTACCTGGGCCCCTTCTCCGAGGCCACTCCCT
CTTACCTGACCGGTGAGTTCCCCGGTGATTACGGCTGGGACACCGCCGGCCTGTCTGCCG
ACCCCGAGACCTTCGCGAAGAACCGCGAGCTGGAGGTCATTCATGCCAGGTGGGCAATGT
TGGGCGCCCTCGGGTGTGTGACCCCTGAGCTGTTGGCTAAGAACGGCGTGAAGTTTGGTG
AGGCAGTGTGGTTCAAGGCTGGCTCTCAAATCTTCGCTGACGGAGGGTTGGACTACTTGG
GCAACCCCAGCTTGGTGCACGCTCAGAGCATTTTGGCCATCTGGGCATGTCAGGTTGTGC
TGATGGGCGCTGTTGAGGGTTACAGAGTTGGCGGCGGCCCCCTCGGCGAGGGCCTGGACC
CCATCTACCCCG
■■Homology search results ■■ -
sp_hit_id P12332
Definition sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis
Align length 179
Score (bit) 340.0
E-value 3.0e-93
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953024|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_K20, 5'
         (612 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   340   3e-93
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   327   4e-89
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   323   6e-88
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   322   1e-87
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   321   2e-87
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   321   2e-87
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   318   1e-86
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   317   3e-86
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   311   1e-84
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   311   1e-84
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   308   1e-83
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   305   2e-82
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   298   1e-80
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   290   5e-78
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   289   9e-78
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   286   4e-77
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   286   4e-77
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   285   1e-76
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   285   1e-76
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   285   2e-76
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   283   4e-76
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   283   5e-76
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   283   5e-76
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   283   5e-76
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   283   6e-76
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   283   6e-76
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   282   8e-76
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   282   8e-76
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   282   8e-76
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   281   1e-75

>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  340 bits (872), Expect = 3e-93
 Identities = 161/179 (89%), Positives = 167/179 (93%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
           FAGQT LKPQNEL ++VG    RVSMRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWF 130

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           KAGSQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLD +YP
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYP 189


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  327 bits (837), Expect = 4e-89
 Identities = 156/180 (86%), Positives = 165/180 (91%), Gaps = 1/180 (0%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
           FAGQTALK  NEL  ++G V   RVSMRRTVKS P SIWYGPDRPKYLGPFS+  PSYLT
Sbjct: 11  FAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDPIYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYP 190


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  323 bits (827), Expect = 6e-88
 Identities = 150/179 (83%), Positives = 165/179 (92%), Gaps = 1/179 (0%)
 Frame = +3

Query: 78  AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
           AGQT L+PQ NEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
           EFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWF
Sbjct: 73  EFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWF 132

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           KAG+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVGGG LGEGLDP+ P
Sbjct: 133 KAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLP 191


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  322 bits (824), Expect = 1e-87
 Identities = 149/179 (83%), Positives = 167/179 (93%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
           FAGQTALK ++EL ++VG  + R SMRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTG
Sbjct: 11  FAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTG 70

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
           EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWF 130

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           KAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YP
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYP 189


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  321 bits (823), Expect = 2e-87
 Identities = 152/180 (84%), Positives = 163/180 (90%), Gaps = 1/180 (0%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
           F GQ   K QNE  ++VGN  E R++MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           FKAGSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYP 190


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
           chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
          Length = 265

 Score =  321 bits (822), Expect = 2e-87
 Identities = 150/180 (83%), Positives = 165/180 (91%), Gaps = 1/180 (0%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
           FAGQTALK QNEL +++G+    R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           FKAGSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYP 190


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score =  318 bits (816), Expect = 1e-86
 Identities = 151/180 (83%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
           FAGQTALK QNEL +++G+    R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGV FGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYP 190


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
           chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
          Length = 265

 Score =  317 bits (812), Expect = 3e-86
 Identities = 150/180 (83%), Positives = 162/180 (90%), Gaps = 1/180 (0%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
           F G+T L+  NE  ++ GN  +AR +MRRTVKS PESIWYGPDRPKYLGPFSE  PSYLT
Sbjct: 11  FTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGC  PELL KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           FKAGSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYP 190


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  311 bits (798), Expect = 1e-84
 Identities = 144/170 (84%), Positives = 160/170 (94%)
 Frame = +3

Query: 102 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 281
           ++EL +RVG+   R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 282 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 461
           TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 462 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YP
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYP 188



 Score = 30.8 bits (68), Expect = 5.7
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +3

Query: 216 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 395
           GP  E     L   +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 396 AKNG 407
              G
Sbjct: 232 TGKG 235


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  311 bits (798), Expect = 1e-84
 Identities = 144/170 (84%), Positives = 160/170 (94%)
 Frame = +3

Query: 102 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 281
           ++EL +RVG+   R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 282 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 461
           TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 462 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YP
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYP 188



 Score = 30.8 bits (68), Expect = 5.7
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +3

Query: 216 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 395
           GP  E     L   +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 396 AKNG 407
              G
Sbjct: 232 TGKG 235
tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 179
Score (bit) 334.0
E-value 2.0e-90
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953024|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_K20, 5'
         (612 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   334   2e-90
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   331   2e-89
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   330   4e-89
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   329   7e-89
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos...   329   7e-89
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   328   1e-88
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   328   1e-88
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   328   2e-88
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   328   2e-88
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   328   2e-88
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   328   2e-88
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   328   2e-88
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   327   3e-88
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   327   3e-88
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ...   327   4e-88
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   326   6e-88
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   326   6e-88
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   326   6e-88
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   325   1e-87
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   325   1e-87
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   325   1e-87
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ...   324   2e-87
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul...   324   3e-87
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul...   324   3e-87
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   322   8e-87
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   320   3e-86
tr|Q93YG3|Q93YG3_SOYBN Chlorophyll a/b binding protein type II O...   320   5e-86
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti...   318   1e-85
tr|Q41449|Q41449_SOLTU Chlorophyll a,b binding protein type I OS...   318   2e-85
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   318   2e-85

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  334 bits (857), Expect = 2e-90
 Identities = 155/179 (86%), Positives = 169/179 (94%), Gaps = 1/179 (0%)
 Frame = +3

Query: 78  AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
           AGQT L+PQ NEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWF 132

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YP
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYP 191


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
           putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
          Length = 264

 Score =  331 bits (849), Expect = 2e-89
 Identities = 156/179 (87%), Positives = 165/179 (92%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
           FAGQTALK QNEL +RVG+   R  MRRT  STP+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWF 130

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYP 189


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
           OS=Pachysandra terminalis PE=2 SV=1
          Length = 264

 Score =  330 bits (846), Expect = 4e-89
 Identities = 154/178 (86%), Positives = 166/178 (93%)
 Frame = +3

Query: 78  AGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGE 257
           AG+TALK QNEL K+VG    R+SM RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGE
Sbjct: 12  AGRTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 258 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 437
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 131

Query: 438 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           AG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYP
Sbjct: 132 AGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYP 189


>tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax
           ginseng GN=cab PE=2 SV=1
          Length = 265

 Score =  329 bits (844), Expect = 7e-89
 Identities = 155/180 (86%), Positives = 170/180 (94%), Gaps = 1/180 (0%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
           FAGQTALKPQNEL +++G++   R++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+LA+NGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILARNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           FKAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYP 190


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_47, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
          Length = 265

 Score =  329 bits (844), Expect = 7e-89
 Identities = 156/180 (86%), Positives = 168/180 (93%), Gaps = 1/180 (0%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
           FAGQTALK  NEL ++VG +   R++MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           FKAG+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYP 190


>tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesting
           chlorophyll a/b-binding protein) OS=Arabidopsis thaliana
           GN=Lhcb2:4 PE=2 SV=1
          Length = 266

 Score =  328 bits (842), Expect = 1e-88
 Identities = 151/181 (83%), Positives = 168/181 (92%), Gaps = 2/181 (1%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVG--NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYL 248
           FAGQT LKP N+L +++G  N   R+ MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYL
Sbjct: 11  FAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYL 70

Query: 249 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 428
           TGE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC  PE+L+KNGVKFGEAV
Sbjct: 71  TGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAV 130

Query: 429 WFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIY 608
           WFKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYR+GGGPLGEGLDP+Y
Sbjct: 131 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGGGPLGEGLDPLY 190

Query: 609 P 611
           P
Sbjct: 191 P 191


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
           OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
          Length = 264

 Score =  328 bits (841), Expect = 1e-88
 Identities = 153/179 (85%), Positives = 164/179 (91%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 254
           F GQT LK QNEL ++VG    R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FVGQTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 255 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 434
           EFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 435 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           KAGSQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYP
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYP 189


>tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana
           GN=Lhcb2.3 PE=2 SV=1
          Length = 265

 Score =  328 bits (840), Expect = 2e-88
 Identities = 153/180 (85%), Positives = 169/180 (93%), Gaps = 1/180 (0%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
           FAGQTALKP NEL ++VG +   RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC  PE+L+KNGVKFGEAVW
Sbjct: 71  GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190


>tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana
           GN=Lhcb2.1 PE=2 SV=1
          Length = 265

 Score =  328 bits (840), Expect = 2e-88
 Identities = 153/180 (85%), Positives = 169/180 (93%), Gaps = 1/180 (0%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
           FAGQTALKP NEL ++VG +   RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC  PE+L+KNGVKFGEAVW
Sbjct: 71  GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190


>tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein
           (At2g05100/F15L11.2) OS=Arabidopsis thaliana
           GN=At2g05100 PE=2 SV=1
          Length = 265

 Score =  328 bits (840), Expect = 2e-88
 Identities = 153/180 (85%), Positives = 169/180 (93%), Gaps = 1/180 (0%)
 Frame = +3

Query: 75  FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 251
           FAGQTALKP NEL ++VG +   RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC  PE+L+KNGVKFGEAVW
Sbjct: 71  GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 432 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 611
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190