DK953040 [AcEST]

DK953040
Clone id	TST38A01NGRL0015_L12
Library	TST38
Length	561
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_L12. 5' end sequence.
Accession	DK953040
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL1Contig3
Sequence	ATTTTTTGTCTCGCTTTTTGTATTTGGATTTTTATCAAATGATCCCGGACGAAACCCCGG TCGTAAAGATTGAAGGAGAAGTAGTGTTTCACTTCATTTTTATCGATGGCAAAAATTAGA TACTACATCAATTTAGCCAATTGAGTAATAAGGGAGAGAGAGGGATTCGAACCCTCGGTA CATAAAAATTGTACAACGGATTAGCAATCCGACACTTTAAACCCCTCGGCCATCTCTCCT AAATACTTGGGGTGCCTGCGGCCTCACTCAATTTTAACACTAATTTAGTGTGTAAGTCTA TAATAACAAAGTATTAATGTAGGAATATAAACTTAATTAAACATCGGAGTCAAATTTTGT ACAATCTTTGAAAGAAGAGAAGAAAAAAAACTTTTCTTTCACAACAAAGTTGTGAAAAGA TGTCGGACCCCCCTCTTGCTTATCTATTTACGGATGCAACGTAAAAGTGGTAATAAAAAG TAGATTTTTGAGAATATCTTCCCAAATAGGGATTTTTGCTGGAAATCAATGTTTCCCATC CCAACCGGATTTGAGTTGTCT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK953040\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_L12, 5' (561 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q3HKB2
Definition	tr\|Q3HKB2\|Q3HKB2_TOBAC Putative uncharacterized protein OS=Nicotiana tabacum
Align length	29
Score (bit)	47.0
E-value	0.0007
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK953040\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_L12, 5' (561 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q3HKB2\|Q3HKB2_TOBAC Putative uncharacterized protein OS=Nicot... 47 7e-04 tr\|Q33C54\|Q33C54_NICTO Putative uncharacterized protein OS=Nicot... 47 7e-04 tr\|Q32439\|Q32439_HORVU ORF44 OS=Hordeum vulgare PE=4 SV=1 44 0.008 >tr\|Q3HKB2\|Q3HKB2_TOBAC Putative uncharacterized protein OS=Nicotiana tabacum PE=4 SV=1 Length = 90 Score = 47.0 bits (110), Expect = 7e-04 Identities = 22/29 (75%), Positives = 23/29 (79%) Frame = +3 Query: 153 GERGIRTLGTKLYNGLAIRHFKPLGHLS 239 G+RGIRTLGT YNGLAIR F PL HLS Sbjct: 54 GKRGIRTLGTINSYNGLAIRRFSPLSHLS 82 >tr\|Q33C54\|Q33C54_NICTO Putative uncharacterized protein OS=Nicotiana tomentosiformis PE=4 SV=1 Length = 90 Score = 47.0 bits (110), Expect = 7e-04 Identities = 22/29 (75%), Positives = 23/29 (79%) Frame = +3 Query: 153 GERGIRTLGTKLYNGLAIRHFKPLGHLS 239 G+RGIRTLGT YNGLAIR F PL HLS Sbjct: 54 GKRGIRTLGTINSYNGLAIRRFSPLSHLS 82 >tr\|Q32439\|Q32439_HORVU ORF44 OS=Hordeum vulgare PE=4 SV=1 Length = 44 Score = 43.5 bits (101), Expect = 0.008 Identities = 19/23 (82%), Positives = 19/23 (82%) Frame = -1 Query: 69 SLRPGFRPGSFDKNPNTKSETKN 1 S RPGFRPGS DKNP KSETKN Sbjct: 18 SWRPGFRPGSLDKNPKIKSETKN 40