DK953057 |
Clone id |
TST38A01NGRL0015_M05 |
Library |
TST38 |
Length |
630 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_M05. 5' end sequence. |
Accession |
DK953057 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1322Contig1 |
Sequence |
GGACATGGCCTGCCAACAAGCTCTTACATCTTCGTTATGGAGGACGGATTGTTGCCAGCC TCGCGTCCAGAGCCTCTCTTCGCTCACGCGTTTCAGCTGTACAAGTAAGACAAGAAGGGC CCTTCAGCTGGTTGTGCTTGCGCGCAAGAAGTCTGGTTTTGCAGAGATTCTCTTTAACCG AAGACATGCAGAGAAGGAGATAGCACTTCAGAGCTCTCGACGGTCGAGGTTGAAACGCGG TACTGTGTCTCCTCGACTTCCAGTCCCTGATCACATACCAAGGCCGCCTTATGTCAACTC TATTCGTGTGCCCGATTTCTCGAAGCTACCACAGATACACGATAGTCATGGCATAGAGTG CATGCGAGCTTCAGGCCGATTGGCAGCAGAGGTTCTCAATTACGCTGGCACTTTGGTCAA GCCAGGTGTGACAACAGATGAAATTGACAAGGCTGTGCATAAGATGATTGTTGAAGCTGG GGCCTATCCCTCTCCACTTGGATATGGTGGTTTCCCAAAGAGTGTTTGCACTTCTGTAAA TGATTGCATCTGCCATGGGATACCAGATTCTCGGTCCTTGCAGGATGGAGACATTGTGAA TATTGATGTGACTGTGTATTTAAATGGTTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FV50 |
Definition |
sp|Q9FV50|AMP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana |
Align length |
164 |
Score (bit) |
235.0 |
E-value |
1.0e-61 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953057|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_M05, 5' (616 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9FV50|AMP1D_ARATH Methionine aminopeptidase 1D, chloroplasti... 235 1e-61 sp|Q9FV52|AMP1B_ARATH Methionine aminopeptidase 1B, chloroplasti... 219 1e-56 sp|Q9FV51|AMP1C_ARATH Methionine aminopeptidase 1C, chloroplasti... 191 3e-48 sp|Q54VU7|AMP1D_DICDI Methionine aminopeptidase 1D, mitochondria... 164 3e-40 sp|Q4VBS4|AMP1D_DANRE Methionine aminopeptidase 1D, mitochondria... 152 2e-36 sp|P0A5J2|AMPM_MYCTU Methionine aminopeptidase OS=Mycobacterium ... 146 7e-35 sp|P0A5J3|AMPM_MYCBO Methionine aminopeptidase OS=Mycobacterium ... 146 7e-35 sp|Q9CPW9|AMP1D_MOUSE Methionine aminopeptidase 1D, mitochondria... 146 9e-35 sp|Q6UB28|AMP1D_HUMAN Methionine aminopeptidase 1D, mitochondria... 146 9e-35 sp|A6QLA4|AMPM1_BOVIN Methionine aminopeptidase 1 OS=Bos taurus ... 131 3e-30 sp|Q5RBF3|AMPM1_PONAB Methionine aminopeptidase 1 OS=Pongo abeli... 130 5e-30 sp|P53582|AMPM1_HUMAN Methionine aminopeptidase 1 OS=Homo sapien... 130 5e-30 sp|Q5I0A0|AMPM1_XENTR Methionine aminopeptidase 1 OS=Xenopus tro... 129 1e-29 sp|Q5ZIM5|AMPM1_CHICK Methionine aminopeptidase 1 OS=Gallus gall... 129 1e-29 sp|Q54WU3|AMPM1_DICDI Methionine aminopeptidase 1 OS=Dictyosteli... 128 3e-29 sp|Q8BP48|AMPM1_MOUSE Methionine aminopeptidase 1 OS=Mus musculu... 127 5e-29 sp|Q7ZWV9|AMPM1_XENLA Methionine aminopeptidase 1 OS=Xenopus lae... 127 6e-29 sp|Q4QRK0|AMPM1_DANRE Methionine aminopeptidase 1 OS=Danio rerio... 125 1e-28 sp|Q9SLN5|AMP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsi... 125 2e-28 sp|Q01662|AMPM1_YEAST Methionine aminopeptidase 1 OS=Saccharomyc... 121 2e-27 sp|O59730|AMPM1_SCHPO Probable methionine aminopeptidase 1 OS=Sc... 120 6e-27 sp|Q9ZCD3|AMPM_RICPR Methionine aminopeptidase OS=Rickettsia pro... 109 1e-23 sp|P0A1X6|AMPM_SALTY Methionine aminopeptidase OS=Salmonella typ... 102 1e-21 sp|P0A1X7|AMPM_SALTI Methionine aminopeptidase OS=Salmonella typ... 102 1e-21 sp|P0AE21|AMPM_SHIFL Methionine aminopeptidase OS=Shigella flexn... 100 5e-21 sp|P0AE18|AMPM_ECOLI Methionine aminopeptidase OS=Escherichia co... 100 5e-21 sp|P0AE19|AMPM_ECOL6 Methionine aminopeptidase OS=Escherichia co... 100 5e-21 sp|P0AE20|AMPM_ECO57 Methionine aminopeptidase OS=Escherichia co... 100 5e-21 sp|P53579|AMPM1_SYNY3 Putative methionine aminopeptidase A OS=Sy... 100 8e-21 sp|Q8K9T1|AMPM_BUCAP Methionine aminopeptidase OS=Buchnera aphid... 96 1e-19
>sp|Q9FV50|AMP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1 Length = 350
Score = 235 bits (600), Expect = 1e-61 Identities = 113/164 (68%), Positives = 133/164 (81%) Frame = +3
Query: 123 LARKKSGFAEILFNRRHAEKEIALQSSRRSRLKRGTVSPRLPVPDHIPRPPYVNSIRVPD 302 L+R SG ++LFNRR+ ++ I +R RL+ G VSPR PVP HI +PPYV+S++ P Sbjct: 44 LSRTFSGLTDLLFNRRNEDEVI---DGKRKRLRPGNVSPRRPVPGHITKPPYVDSLQAPG 100
Query: 303 FSKLPQIHDSHGIECMRASGRLAAEVLNYAGTLVKPGVTTDEIDKAVHKMIVEAGAYPSP 482 S ++HD GIECMRASG LAA V +YAGTLVKPGVTTDEID+AVH MI+E GAYPSP Sbjct: 101 ISSGLEVHDKKGIECMRASGILAARVRDYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSP 160
Query: 483 LGYGGFPKSVCTSVNDCICHGIPDSRSLQDGDIVNIDVTVYLNG 614 LGYGGFPKSVCTSVN+CICHGIPDSR L+DGDI+NIDVTVYLNG Sbjct: 161 LGYGGFPKSVCTSVNECICHGIPDSRPLEDGDIINIDVTVYLNG 204
>sp|Q9FV52|AMP1B_ARATH Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2 Length = 369
Score = 219 bits (557), Expect = 1e-56 Identities = 113/168 (67%), Positives = 126/168 (75%) Frame = +3
Query: 111 QLVVLARKKSGFAEILFNRRHAEKEIALQSSRRSRLKRGTVSPRLPVPDHIPRPPYVNSI 290 Q V A+K SG E + R+ E E + R L+RG VSPRL VPDHIPRPPYV S Sbjct: 56 QFHVSAKKVSGLEEAIRIRKMRELETKSKVRRNPPLRRGRVSPRLLVPDHIPRPPYVESG 115
Query: 291 RVPDFSKLPQIHDSHGIECMRASGRLAAEVLNYAGTLVKPGVTTDEIDKAVHKMIVEAGA 470 +PD S QI GI MRA+ LAA VLNYAGTLVKP VTT+EIDKAVH MI+EAGA Sbjct: 116 VLPDISSEFQIPGPEGIAKMRAACELAARVLNYAGTLVKPSVTTNEIDKAVHDMIIEAGA 175
Query: 471 YPSPLGYGGFPKSVCTSVNDCICHGIPDSRSLQDGDIVNIDVTVYLNG 614 YPSPLGYGGFPKSVCTSVN+C+CHGIPDSR LQ GDI+NIDVTVYL+G Sbjct: 176 YPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYLDG 223
>sp|Q9FV51|AMP1C_ARATH Methionine aminopeptidase 1C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2 Length = 344
Score = 191 bits (485), Expect = 3e-48 Identities = 100/162 (61%), Positives = 120/162 (74%) Frame = +3
Query: 129 RKKSGFAEILFNRRHAEKEIALQSSRRSRLKRGTVSPRLPVPDHIPRPPYVNSIRVPDFS 308 +KKS I +R + + L+ L GTVSPRL VPDHI +P YV S +VP+ S Sbjct: 38 KKKSSSLRI---KRIQQLQSTLEDRINPPLVCGTVSPRLSVPDHILKPLYVESSKVPEIS 94
Query: 309 KLPQIHDSHGIECMRASGRLAAEVLNYAGTLVKPGVTTDEIDKAVHKMIVEAGAYPSPLG 488 QI DS GI M+ + LAA VL+YAGTLV+P VTTDEIDKAVH+M++E GAYPSPLG Sbjct: 95 SELQIPDSIGIVKMKKACELAARVLDYAGTLVRPFVTTDEIDKAVHQMVIEFGAYPSPLG 154
Query: 489 YGGFPKSVCTSVNDCICHGIPDSRSLQDGDIVNIDVTVYLNG 614 YGGFPKSVCTSVN+C+ HGIPDSR LQ+GDI+NIDV VYL+G Sbjct: 155 YGGFPKSVCTSVNECMFHGIPDSRPLQNGDIINIDVAVYLDG 196
>sp|Q54VU7|AMP1D_DICDI Methionine aminopeptidase 1D, mitochondrial OS=Dictyostelium discoideum GN=map1d PE=3 SV=1 Length = 404
Score = 164 bits (415), Expect = 3e-40 Identities = 85/178 (47%), Positives = 115/178 (64%), Gaps = 2/178 (1%) Frame = +3
Query: 87 TSKTRRALQLVVLARKKSGFAEILFNRRHAEKEIALQSSRRSRLKRGTVSPRLPVPDHIP 266 T + R ++ L +K + E + + + L + + ++ G VSP+ +P HI Sbjct: 79 TEEIRDFVRSQRLTKKTASPLEGMNRKERRKMTTKLYRNPDNLIRGGIVSPQPLIPAHIK 138
Query: 267 RPPYVNSIRVPDFS--KLPQIHDSHGIECMRASGRLAAEVLNYAGTLVKPGVTTDEIDKA 440 +P YV V DF +IH + IE MR G++A EVL YAGTLV+PG+TTDEIDK Sbjct: 139 KPKYVLGEPVIDFEIDDPIEIHTAESIEHMRVVGKMAKEVLEYAGTLVRPGITTDEIDKL 198
Query: 441 VHKMIVEAGAYPSPLGYGGFPKSVCTSVNDCICHGIPDSRSLQDGDIVNIDVTVYLNG 614 VH+ I++ GAYPSPLGY GFPKS+CTS+N+ +CHGIPD R L+ GDIV IDVT+Y NG Sbjct: 199 VHQNIIDRGAYPSPLGYKGFPKSICTSINEVLCHGIPDDRPLEFGDIVKIDVTLYYNG 256
>sp|Q4VBS4|AMP1D_DANRE Methionine aminopeptidase 1D, mitochondrial OS=Danio rerio GN=map1d PE=2 SV=1 Length = 338
Score = 152 bits (383), Expect = 2e-36 Identities = 74/135 (54%), Positives = 93/135 (68%) Frame = +3
Query: 210 SRLKRGTVSPRLPVPDHIPRPPYVNSIRVPDFSKLPQIHDSHGIECMRASGRLAAEVLNY 389 S ++ V P PVP HI RP YV+S +VP++ +I D I+ +R + +LA +L Sbjct: 54 SVVRPAIVRPAYPVPKHIQRPDYVSSSKVPEWPDYIEIKDEEQIQGLRRACQLARHILLL 113
Query: 390 AGTLVKPGVTTDEIDKAVHKMIVEAGAYPSPLGYGGFPKSVCTSVNDCICHGIPDSRSLQ 569 G +K G+TTDEID VH+ + YPSPL YGGFPKSVCTSVN+ +CHGIPDSR LQ Sbjct: 114 TGNSLKVGMTTDEIDFIVHQEAIRHNGYPSPLHYGGFPKSVCTSVNNVVCHGIPDSRPLQ 173
Query: 570 DGDIVNIDVTVYLNG 614 DGDI+NIDVTVYL G Sbjct: 174 DGDIINIDVTVYLEG 188
>sp|P0A5J2|AMPM_MYCTU Methionine aminopeptidase OS=Mycobacterium tuberculosis GN=map PE=1 SV=1 Length = 285
Score = 146 bits (369), Expect = 7e-35 Identities = 74/136 (54%), Positives = 91/136 (66%) Frame = +3
Query: 207 RSRLKRGTVSPRLPVPDHIPRPPYVNSIRVPDFSKLPQIHDSHGIECMRASGRLAAEVLN 386 R+ L G +SP PVP+ I RP YV + S+ P + IE MR +GR+AA L Sbjct: 4 RTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSE-PWVQTPEVIEKMRVAGRIAAGALA 62
Query: 387 YAGTLVKPGVTTDEIDKAVHKMIVEAGAYPSPLGYGGFPKSVCTSVNDCICHGIPDSRSL 566 AG V PGVTTDE+D+ H+ +V+ GAYPS LGY GFPKS CTS+N+ ICHGIPDS + Sbjct: 63 EAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVI 122
Query: 567 QDGDIVNIDVTVYLNG 614 DGDIVNIDVT Y+ G Sbjct: 123 TDGDIVNIDVTAYIGG 138
>sp|P0A5J3|AMPM_MYCBO Methionine aminopeptidase OS=Mycobacterium bovis GN=map PE=3 SV=1 Length = 285
Score = 146 bits (369), Expect = 7e-35 Identities = 74/136 (54%), Positives = 91/136 (66%) Frame = +3
Query: 207 RSRLKRGTVSPRLPVPDHIPRPPYVNSIRVPDFSKLPQIHDSHGIECMRASGRLAAEVLN 386 R+ L G +SP PVP+ I RP YV + S+ P + IE MR +GR+AA L Sbjct: 4 RTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSE-PWVQTPEVIEKMRVAGRIAAGALA 62
Query: 387 YAGTLVKPGVTTDEIDKAVHKMIVEAGAYPSPLGYGGFPKSVCTSVNDCICHGIPDSRSL 566 AG V PGVTTDE+D+ H+ +V+ GAYPS LGY GFPKS CTS+N+ ICHGIPDS + Sbjct: 63 EAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVI 122
Query: 567 QDGDIVNIDVTVYLNG 614 DGDIVNIDVT Y+ G Sbjct: 123 TDGDIVNIDVTAYIGG 138
>sp|Q9CPW9|AMP1D_MOUSE Methionine aminopeptidase 1D, mitochondrial OS=Mus musculus GN=Map1d PE=2 SV=1 Length = 335
Score = 146 bits (368), Expect = 9e-35 Identities = 74/128 (57%), Positives = 89/128 (69%) Frame = +3
Query: 231 VSPRLPVPDHIPRPPYVNSIRVPDFSKLPQIHDSHGIECMRASGRLAAEVLNYAGTLVKP 410 VSP PVP I +P YV + VPD+ ++ D I+ +R + RLA VL AG +K Sbjct: 58 VSPAHPVPKRIKKPDYVTTGIVPDWGDSIEVKDEDQIQGLREACRLARHVLLLAGKSLKV 117
Query: 411 GVTTDEIDKAVHKMIVEAGAYPSPLGYGGFPKSVCTSVNDCICHGIPDSRSLQDGDIVNI 590 +TT+EID VH I+ AYPSPLGYG FPKSVCTSVN+ +CHGIPDSR LQDGDI+NI Sbjct: 118 DMTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINI 177
Query: 591 DVTVYLNG 614 DVTVY NG Sbjct: 178 DVTVYYNG 185
>sp|Q6UB28|AMP1D_HUMAN Methionine aminopeptidase 1D, mitochondrial OS=Homo sapiens GN=MAP1D PE=1 SV=1 Length = 335
Score = 146 bits (368), Expect = 9e-35 Identities = 72/128 (56%), Positives = 90/128 (70%) Frame = +3
Query: 231 VSPRLPVPDHIPRPPYVNSIRVPDFSKLPQIHDSHGIECMRASGRLAAEVLNYAGTLVKP 410 VS PVP HI +P YV + VPD+ ++ + I+ + + +LA VL AG +K Sbjct: 58 VSSAHPVPKHIKKPDYVTTGIVPDWGDSIEVKNEDQIQGLHQACQLARHVLLLAGKSLKV 117
Query: 411 GVTTDEIDKAVHKMIVEAGAYPSPLGYGGFPKSVCTSVNDCICHGIPDSRSLQDGDIVNI 590 +TT+EID VH+ I+ AYPSPLGYGGFPKSVCTSVN+ +CHGIPDSR LQDGDI+NI Sbjct: 118 DMTTEEIDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDIINI 177
Query: 591 DVTVYLNG 614 DVTVY NG Sbjct: 178 DVTVYYNG 185
>sp|A6QLA4|AMPM1_BOVIN Methionine aminopeptidase 1 OS=Bos taurus GN=METAP1 PE=2 SV=1 Length = 386
Score = 131 bits (329), Expect = 3e-30 Identities = 69/133 (51%), Positives = 84/133 (63%), Gaps = 7/133 (5%) Frame = +3
Query: 237 PRLPVPDHIPRPPYVN-------SIRVPDFSKLPQIHDSHGIECMRASGRLAAEVLNYAG 395 P PVP +I RP Y + S + + ++ S IE MR RLA EVL+ A Sbjct: 95 PTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDIAA 154
Query: 396 TLVKPGVTTDEIDKAVHKMIVEAGAYPSPLGYGGFPKSVCTSVNDCICHGIPDSRSLQDG 575 L+KPGVTT+EID AVH + YPSPL Y FPKS CTSVN+ ICHGIPD R LQ+G Sbjct: 155 GLIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEG 214
Query: 576 DIVNIDVTVYLNG 614 DIVN+D+T+Y NG Sbjct: 215 DIVNVDITLYRNG 227
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQC2 |
Definition |
tr|B8LQC2|B8LQC2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
204 |
Score (bit) |
251.0 |
E-value |
2.0e-65 |
Report |
|