| DK953067 |
| Clone id |
TST38A01NGRL0015_M16 |
| Library |
TST38 |
| Length |
585 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_M16. 5' end sequence. |
| Accession |
DK953067 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL3746Contig1 |
| Sequence |
TCCCTTAGTTGTACTTAAATTTAATTTAATTGTACTTAAATTCAATGAGAACTCTTCTGA CCTTACAAGATTTTAGAGTGCTTATGAAGTATCCTGTAGTTTGCAAGAGACGAGCATAGC AGAGAACGAAGCGAGAATGGTTGGGACCAATGTCAAAGCTGAGACGTTGGCGTTAATGAA TAAGCGCTCCGAGATGGAGAACGAGATGGACATCATCATCTCTCGCCTCTGTCAACCTGG GGGCCCTGGCCTCGAAGGCAATCTTCTTGATCCCCAGGGGTTCCCTAGAGCAGATATAGA TGTTTTTCAAGTTCGAGGAGATCGTCATCGTTTGTCTGTGTTGCGAAATGATCACAAGTC TATAACAAAGGAAATCGAGAAGAATATCGAGGTTCTACATTCTGCCCATGTTGGGGTAAT GCTTCCACAAAAGAGAACAGTTGAAGGGGAGGAAGTGATACACACACGTCCAATGGCTGT TACAGGAGCCGAGCCATCTTTTGTTACGAGCTTTGTGCCTGGTAGGACCCTAGTTGGAGT GGATTCTCCTAGTGGGCTACCTTTTGCTGTCTTTGATGAGGTTCA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O00233 |
| Definition |
sp|O00233|PSMD9_HUMAN 26S proteasome non-ATPase regulatory subunit 9 OS=Homo sapiens |
| Align length |
102 |
| Score (bit) |
65.9 |
| E-value |
1.0e-10 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9PAL0 |
| Definition |
tr|A9PAL0|A9PAL0_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
| Align length |
152 |
| Score (bit) |
137.0 |
| E-value |
6.0e-31 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953067|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_M16, 5' (585 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PAL0|A9PAL0_POPTR Putative uncharacterized protein OS=Popul... 137 6e-31 tr|A7PFS2|A7PFS2_VITVI Chromosome chr11 scaffold_14, whole genom... 128 2e-28 tr|A9RY59|A9RY59_PHYPA Predicted protein OS=Physcomitrella paten... 127 3e-28 tr|Q9FJM1|Q9FJM1_ARATH Genomic DNA, chromosome 5, P1 clone: MTI2... 127 5e-28 tr|Q8LAJ4|Q8LAJ4_ARATH 26S proteasome regulatory subunit p27, pu... 125 2e-27 tr|A9RL22|A9RL22_PHYPA Predicted protein OS=Physcomitrella paten... 120 4e-26 tr|B7FI42|B7FI42_MEDTR Putative uncharacterized protein OS=Medic... 117 5e-25 tr|B6TN44|B6TN44_MAIZE 26S proteasome non-ATPase regulatory subu... 113 9e-24 tr|B4FPX0|B4FPX0_MAIZE 26S proteasome non-ATPase regulatory subu... 112 1e-23 tr|Q69Q88|Q69Q88_ORYSJ Os09g0420600 protein OS=Oryza sativa subs... 111 3e-23 tr|A3BYX3|A3BYX3_ORYSJ Putative uncharacterized protein OS=Oryza... 110 6e-23 tr|B8BFD5|B8BFD5_ORYSI Putative uncharacterized protein OS=Oryza... 86 2e-15 tr|A8IT97|A8IT97_CHLRE Predicted protein (Fragment) OS=Chlamydom... 84 4e-15 tr|Q6GLK7|Q6GLK7_XENLA MGC84770 protein OS=Xenopus laevis GN=psm... 80 6e-14 tr|Q4V995|Q4V995_DANRE Zgc:92643 protein OS=Danio rerio GN=zgc:9... 73 1e-11 tr|Q8AVD0|Q8AVD0_XENLA MGC53232 protein OS=Xenopus laevis PE=2 SV=1 72 2e-11 tr|B1H129|B1H129_XENTR Psmd9 protein OS=Xenopus tropicalis GN=ps... 72 2e-11 tr|Q5ZJS1|Q5ZJS1_CHICK Putative uncharacterized protein OS=Gallu... 72 3e-11 tr|O77379|O77379_PLAF7 Proteasome regulatory protein, putative O... 72 3e-11 tr|B6KEF8|B6KEF8_TOXGO 26S Proteasome non-ATPase regulatory subu... 72 3e-11 tr|Q6DH53|Q6DH53_DANRE Zgc:92643 OS=Danio rerio GN=zgc:92643 PE=... 70 7e-11 tr|B6PGT1|B6PGT1_BRAFL Putative uncharacterized protein OS=Branc... 70 7e-11 tr|B6M0R8|B6M0R8_BRAFL Putative uncharacterized protein OS=Branc... 70 7e-11 tr|Q28HW8|Q28HW8_XENTR Proteasome (Prosome, macropain) 26S subun... 70 9e-11 tr|A4S7Y4|A4S7Y4_OSTLU Predicted protein OS=Ostreococcus lucimar... 67 6e-10 tr|A5K7P8|A5K7P8_PLAVI 26S proteasome regulatory subunit p27, pu... 66 1e-09 tr|Q4RT46|Q4RT46_TETNG Chromosome 12 SCAF14999, whole genome sho... 66 2e-09 tr|Q3THC1|Q3THC1_MOUSE Putative uncharacterized protein OS=Mus m... 66 2e-09 tr|B5XC13|B5XC13_SALSA 26S proteasome non-ATPase regulatory subu... 65 2e-09 tr|B5X8J0|B5X8J0_SALSA 26S proteasome non-ATPase regulatory subu... 65 2e-09
>tr|A9PAL0|A9PAL0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 216
Score = 137 bits (344), Expect = 6e-31 Identities = 75/152 (49%), Positives = 98/152 (64%), Gaps = 3/152 (1%) Frame = +2
Query: 137 MVGTNVKAETLALMNKRSEMENEMDIIISRLCQPGGPGLEGNLLDPQGFPRADIDVFQVR 316 MVG N+KAET+ LM KRS +E EM++II RLCQPGGPGL GNL+D +GFPR+DID+ VR Sbjct: 1 MVGANLKAETMKLMEKRSALETEMNVIIDRLCQPGGPGLSGNLVDSEGFPRSDIDIPVVR 60
Query: 317 GDRHRLSVLRNDHKSITKEIEKNIEVLHSAHVGVMLPQKRTVEGEEVIHTRPMAVTGAEP 496 +RHRL+ LRNDHK IT++I +NI+VLHSA + T+ V A P Sbjct: 61 AERHRLAELRNDHKEITEKINENIQVLHSARLA----------------TKDSVVGNAVP 104
Query: 497 SFVTSFVPGR---TLVGVDSPSGLPFAVFDEV 583 S + V R + + VD + +PFAV E+ Sbjct: 105 SATSHNVVLRDSPSSMDVDMMASIPFAVVYEI 136
>tr|A7PFS2|A7PFS2_VITVI Chromosome chr11 scaffold_14, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017223001 PE=4 SV=1 Length = 254
Score = 128 bits (322), Expect = 2e-28 Identities = 71/151 (47%), Positives = 103/151 (68%), Gaps = 2/151 (1%) Frame = +2
Query: 137 MVGTNVKAETLALMNKRSEMENEMDIIISRLCQPGGPGLEGNLLDPQGFPRADIDVFQVR 316 MVG N+KAE +ALM++R+E+E +M+ II RLCQPGGPG+ G+L+D +GFPR+DID+ VR Sbjct: 1 MVGANLKAEAMALMDRRTELEAQMNAIIQRLCQPGGPGISGSLVDSEGFPRSDIDIPTVR 60
Query: 317 GDRHRLSVLRNDHKSITKEIEKNIEVLHSAHVGVMLPQKRTVEGEEVIHTRPMAVTGAEP 496 +R RL+ LRND+K IT++I +NI++LHSA + R+ +++ + AV A Sbjct: 61 AERQRLAELRNDYKDITEKINENIQLLHSARLA-----PRSSLHKDLGSSTATAVPSAAS 115
Query: 497 SFVTSFVPGRTL--VGVDSPSGLPFAVFDEV 583 V +P TL + VD+ LPFAV DE+ Sbjct: 116 HNV---LPRDTLTAMDVDATVSLPFAVVDEI 143
>tr|A9RY59|A9RY59_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_121130 PE=4 SV=1 Length = 217
Score = 127 bits (320), Expect = 3e-28 Identities = 74/158 (46%), Positives = 90/158 (56%), Gaps = 9/158 (5%) Frame = +2
Query: 137 MVGTNVKAETLALMNKRSEMENEMDIIISRLCQPGGPGLEGNLLDPQGFPRADIDVFQVR 316 MVG NVKAET+ +M+KR ME EMD II+RL GGPGL+ NL+D QGFPRADI++ VR Sbjct: 1 MVGANVKAETVTMMDKRKAMETEMDAIIARLTVSGGPGLQDNLVDAQGFPRADINIPAVR 60
Query: 317 GDRHRLSVLRNDHKSITKEIEKNIEVLHSAHVGVMLPQKRTVEGEEVIHTRPMAVTGAEP 496 DR RL+ LRNDHK IT IEKN+ +LHS TR + + P Sbjct: 61 SDRQRLTALRNDHKEITDAIEKNLVILHSGG-----------------FTRGSSQSDKLP 103
Query: 497 SFVTSFVPGRTLVGVDSP---------SGLPFAVFDEV 583 + PG +SP S LPFAVFD+V Sbjct: 104 ASPMEIAPGTESTTAESPSPMDEDPYESSLPFAVFDDV 141
>tr|Q9FJM1|Q9FJM1_ARATH Genomic DNA, chromosome 5, P1 clone: MTI20 OS=Arabidopsis thaliana PE=4 SV=1 Length = 275
Score = 127 bits (319), Expect = 5e-28 Identities = 70/153 (45%), Positives = 94/153 (61%), Gaps = 1/153 (0%) Frame = +2
Query: 128 EARMVGTNVKAETLALMNKRSEMENEMDIIISRLCQPGGPGLEGNLLDPQGFPRADIDVF 307 E +MVG N+KAET+ALM+KR+ ME EM+ I+ RLC PGGPGL GNL+D +GFPR DID+ Sbjct: 27 EEKMVGANLKAETMALMDKRTAMETEMNSIVERLCNPGGPGLSGNLIDSEGFPREDIDIP 86
Query: 308 QVRGDRHRLSVLRNDHKSITKEIEKNIEVLHSAHVGVMLPQKRTVEGEEVIHTRPMAVTG 487 VR +R RL+ LR++H IT++I NI++LHS + G E AV Sbjct: 87 MVRTERRRLAELRSEHGEITEKINVNIQILHSVRPTSRASSTKD-SGPEETSLSGAAVNS 145
Query: 488 AEPSFVTS-FVPGRTLVGVDSPSGLPFAVFDEV 583 S TS F + VD + +PFA+ DE+ Sbjct: 146 LSASMQTSGFSVTSGPMDVDVVTSIPFAMVDEI 178
>tr|Q8LAJ4|Q8LAJ4_ARATH 26S proteasome regulatory subunit p27, putative (At5g57950) (Putative uncharacterized protein At5g57950/MTI20_21) OS=Arabidopsis thaliana GN=At5g57950/MTI20_21 PE=2 SV=1 Length = 227
Score = 125 bits (313), Expect = 2e-27 Identities = 69/150 (46%), Positives = 92/150 (61%), Gaps = 1/150 (0%) Frame = +2
Query: 137 MVGTNVKAETLALMNKRSEMENEMDIIISRLCQPGGPGLEGNLLDPQGFPRADIDVFQVR 316 MVG N+KAET+ALM+KR+ ME EM+ I+ RLC PGGPGL GNL+D +GFPR DID+ VR Sbjct: 1 MVGANLKAETMALMDKRTAMETEMNSIVERLCNPGGPGLSGNLIDSEGFPREDIDIPMVR 60
Query: 317 GDRHRLSVLRNDHKSITKEIEKNIEVLHSAHVGVMLPQKRTVEGEEVIHTRPMAVTGAEP 496 +R RL+ LR++H IT++I NI++LHS + G E AV Sbjct: 61 TERRRLAELRSEHGEITEKINVNIQILHSVRPTSRASSTKD-SGPEETSLSGAAVNSLSA 119
Query: 497 SFVTS-FVPGRTLVGVDSPSGLPFAVFDEV 583 S TS F + VD + +PFA+ DE+ Sbjct: 120 SMQTSGFSVTSGPMDVDVVTSIPFAMVDEI 149
>tr|A9RL22|A9RL22_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115990 PE=4 SV=1 Length = 209
Score = 120 bits (302), Expect = 4e-26 Identities = 72/150 (48%), Positives = 90/150 (60%), Gaps = 1/150 (0%) Frame = +2
Query: 137 MVGTNVKAETLALMNKRSEMENEMDIIISRLCQPGGPGLEGNLLDPQGFPRADIDVFQVR 316 MVG + KA+T+ +M+KR ME EMD II+RL PGGPGL+GNL+D QGFP AD+++ VR Sbjct: 1 MVGAHGKAQTVTMMDKRKAMETEMDAIIARLTGPGGPGLQGNLVDAQGFPWADVNLPAVR 60
Query: 317 GDRHRLSVLRNDHKSITKEIEKNIEVLHSAHVGVMLPQKRTVEGEEVIHTRPMAVTGAEP 496 DR RLS LRNDHK I+ IEKN+ +LHS Q + G E + T P Sbjct: 61 SDRQRLSALRNDHKEISDAIEKNLVILHSGGFTRGSSQSDKLPGTE-------STTAESP 113
Query: 497 SFVTSFVPGRTLVGVDS-PSGLPFAVFDEV 583 S + DS S LPFAVFD+V Sbjct: 114 SPMDE----------DSYESSLPFAVFDDV 133
>tr|B7FI42|B7FI42_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 213
Score = 117 bits (293), Expect = 5e-25 Identities = 69/150 (46%), Positives = 93/150 (62%), Gaps = 1/150 (0%) Frame = +2
Query: 137 MVGTNVKAETLALMNKRSEMENEMDIIISRLCQ-PGGPGLEGNLLDPQGFPRADIDVFQV 313 MVGTNVKAET +LM+KRS +E+EM+ II+RL Q PG PGL GNL+D +GFPR+DIDV V Sbjct: 1 MVGTNVKAETKSLMDKRSALESEMNSIIARLSQFPGAPGLSGNLIDSEGFPRSDIDVPLV 60
Query: 314 RGDRHRLSVLRNDHKSITKEIEKNIEVLHSAHVGVMLPQKRTVEGEEVIHTRPMAVTGAE 493 R +R RL+ LRND+ +T +I +NI +LHS +G + E + + P Sbjct: 61 RAERRRLAELRNDYTDVTDKINQNIHILHSTRLG-------NHKNSETVASTP------S 107
Query: 494 PSFVTSFVPGRTLVGVDSPSGLPFAVFDEV 583 + + S P + VD PFAV DE+ Sbjct: 108 QNVLVSLSPNS--MDVDVLVSRPFAVVDEI 135
>tr|B6TN44|B6TN44_MAIZE 26S proteasome non-ATPase regulatory subunit 9 OS=Zea mays PE=2 SV=1 Length = 213
Score = 113 bits (282), Expect = 9e-24 Identities = 64/149 (42%), Positives = 88/149 (59%) Frame = +2
Query: 137 MVGTNVKAETLALMNKRSEMENEMDIIISRLCQPGGPGLEGNLLDPQGFPRADIDVFQVR 316 MV +VKAET+ LM++R +E EMD II+RL GGPG+ G L+D +GFPR+DID+ V Sbjct: 1 MVAPDVKAETMKLMDQRGALEAEMDAIIARLTAAGGPGITGGLVDAEGFPRSDIDIPNVL 60
Query: 317 GDRHRLSVLRNDHKSITKEIEKNIEVLHSAHVGVMLPQKRTVEGEEVIHTRPMAVTGAEP 496 R RL+ LRNDHK IT +I KN+EVLHSA + ++ T + + +EP Sbjct: 61 AQRRRLAELRNDHKDITNKIGKNLEVLHSAKLS--RNEQSTSRRSDTTDPSHFGSSQSEP 118
Query: 497 SFVTSFVPGRTLVGVDSPSGLPFAVFDEV 583 + D +GLPFA+ DE+ Sbjct: 119 ------------MEEDHVTGLPFAMIDEI 135
>tr|B4FPX0|B4FPX0_MAIZE 26S proteasome non-ATPase regulatory subunit 9 OS=Zea mays PE=2 SV=1 Length = 213
Score = 112 bits (281), Expect = 1e-23 Identities = 63/149 (42%), Positives = 88/149 (59%) Frame = +2
Query: 137 MVGTNVKAETLALMNKRSEMENEMDIIISRLCQPGGPGLEGNLLDPQGFPRADIDVFQVR 316 MV +VKAET+ LM++R +E EMD II+RL GGPG+ G L+D +GFPR+DID+ V Sbjct: 1 MVAPDVKAETMKLMDQRGALEAEMDAIIARLTAAGGPGITGGLVDAEGFPRSDIDIPNVL 60
Query: 317 GDRHRLSVLRNDHKSITKEIEKNIEVLHSAHVGVMLPQKRTVEGEEVIHTRPMAVTGAEP 496 R RL+ LRNDHK +T +I KN+EVLHSA + ++ T + + +EP Sbjct: 61 AQRRRLAELRNDHKDVTNKIGKNLEVLHSAKLS--RNEQSTSRRSDTTDPSHFGSSQSEP 118
Query: 497 SFVTSFVPGRTLVGVDSPSGLPFAVFDEV 583 + D +GLPFA+ DE+ Sbjct: 119 ------------MEEDHVTGLPFAMIDEI 135
>tr|Q69Q88|Q69Q88_ORYSJ Os09g0420600 protein OS=Oryza sativa subsp. japonica GN=P0668D04.30 PE=4 SV=1 Length = 213
Score = 111 bits (277), Expect = 3e-23 Identities = 61/149 (40%), Positives = 89/149 (59%) Frame = +2
Query: 137 MVGTNVKAETLALMNKRSEMENEMDIIISRLCQPGGPGLEGNLLDPQGFPRADIDVFQVR 316 MV TN+KAET+ LM++R+ +E EMD II+ L P GPG+ G L+D +GFPR+DID+ V Sbjct: 1 MVATNLKAETVGLMDRRAAVEAEMDAIIAALSVPVGPGITGGLVDAEGFPRSDIDIPAVL 60
Query: 317 GDRHRLSVLRNDHKSITKEIEKNIEVLHSAHVGVMLPQKRTVEGEEVIHTRPMAVTGAEP 496 R +L+ LRNDHK IT +IEKN+EVLHS + + + + P Sbjct: 61 AQRRKLAELRNDHKDITNKIEKNLEVLHSTKLS--------------RNEASIPASSGTP 106
Query: 497 SFVTSFVPGRTLVGVDSPSGLPFAVFDEV 583 + + S + + D+ + LPFA+ DE+ Sbjct: 107 ASLHSGLSQNDPMEEDAVTRLPFAIIDEL 135
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