BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953100|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_O02, 5'
         (622 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P62932|FBX40_MOUSE F-box only protein 40 OS=Mus musculus GN=F...    33   1.2  

>sp|P62932|FBX40_MOUSE F-box only protein 40 OS=Mus musculus
           GN=Fbxo40 PE=2 SV=1
          Length = 710

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
 Frame = -1

Query: 403 PPA*SAKVAGVYTC*LCAPHEPFLYYSLVDCHVL--YYFHLCLFSAYTFPSP*EQCCC-- 236
           PPA      G +      P EP +   ++ CH+L    FH+C  S +T   P EQ  C  
Sbjct: 8   PPALHRHCEGCFNRHCHVPVEPSVSCLVISCHLLCGATFHMCKESEHTLLCPLEQVPCLN 67

Query: 235 -QLVCRAS--RHWPPLHAGTTPMRPLCFSL 155
            +  C  S  RH    H    P   +C S+
Sbjct: 68  SEYGCPLSMARHKLAKHLQVCPASVVCCSM 97

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953100|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_O02, 5'
         (622 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6MH40|B6MH40_BRAFL Putative uncharacterized protein OS=Branc...    34   6.1  
tr|A4XQF6|A4XQF6_PSEMY FMN-dependent alpha-hydroxy acid dehydrog...    34   6.2  
tr|A2YU54|A2YU54_ORYSI Putative uncharacterized protein OS=Oryza...    34   8.0  

>tr|B6MH40|B6MH40_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_123125 PE=4 SV=1
          Length = 498

 Score = 34.3 bits (77), Expect = 6.1
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 171 GRMGVVPAWRGGQWRLALHTSWQQHCSHGEGKVYAEN 281
           G+  V+PA R    R+  HT+W Q+  HG G+ Y E+
Sbjct: 15  GQASVIPAQRASYRRVCYHTNWSQY-RHGVGQFYPED 50


>tr|A4XQF6|A4XQF6_PSEMY FMN-dependent alpha-hydroxy acid
           dehydrogenase OS=Pseudomonas mendocina (strain ymp)
           GN=Pmen_0804 PE=4 SV=1
          Length = 389

 Score = 34.3 bits (77), Expect = 6.2
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = +1

Query: 148 YGRERSKAAAWAWYQRGGAASGGSLCIQAGSSTALMVRGKYMQRISTDGNSR 303
           Y RER    AWA Y  GGAA   SL     +   L +RG+ +Q +S  GN+R
Sbjct: 41  YARERMSEQAWA-YLAGGAADELSLADNRAAFERLRLRGRVLQDLS-GGNTR 90


>tr|A2YU54|A2YU54_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_28864 PE=4 SV=1
          Length = 216

 Score = 33.9 bits (76), Expect = 8.0
 Identities = 25/71 (35%), Positives = 31/71 (43%)
 Frame = +1

Query: 172 AAWAWYQRGGAASGGSLCIQAGSSTALMVRGKYMQRISTDGNSRGHDNQQESSKGMAHVE 351
           AA A      AAS  S    AGS    +V  K+      +GN  G D  Q ++   A  E
Sbjct: 36  AAAAAAAAAAAASAASSTAGAGSRGNNLVLFKWTPMNGANGNGGGGDGDQAAAAAAAAEE 95

Query: 352 HKASKCRRLPP 384
            KA+K RR  P
Sbjct: 96  EKATKRRRYVP 106