DK953103 |
Clone id |
TST38A01NGRL0015_O05 |
Library |
TST38 |
Length |
610 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_O05. 5' end sequence. |
Accession |
DK953103 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL679Contig1 |
Sequence |
TCTCGTCTCGCGAGTCCCATCGGCCATATCCATAGCACCTGCGGCTCATCTGTAGGCCGG AGAGCTATCTTCCAGAAAGAAAATGAGGGAAATTCTCCACATTCAAGGTGGCCAATGCGG CAATCAAATTGGTTCCAAGTTTTGGGAGGTGATCTGTGATGAACATGGCATTGACCCCAC AGGTTCTTACAAGGGTGATTCGGAGCTGCAGCTTGAGCGTATCAATGTCTATTTCAATGA AGCCAGTGGGGGAAGATATGTGCCTAGGGCAGTTCTCATGGATCTGGAGCCTGGTACTAT GGATAGTGTGCGTACGGGACCGCTGGGACAAATTTTTAGGCCTGATAACTTTGTGTTTGG CCAAAGTGGAGCTGGAAACAACTGGGCCAAAGGACACTACACTGAAGGTGCTGAACTTAT CGACTCTGTTTTGGATGTTGTAAGGAAAGAGGCGGAGAATTGTGACTGTCTTCAAGGTTT TGAAGTCTGCCATTCTCTAGGAGGCGGCACTGGTTCTGGTATGGGAACACTACTCATCTC AAAGATACGGGAGGAGTATCCGGATCGAATGATGCTGACATTCTCTGTCTTCCCATCTCC AAAAGTGTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P28551 |
Definition |
sp|P28551|TBB3_SOYBN Tubulin beta chain (Fragment) OS=Glycine max |
Align length |
176 |
Score (bit) |
322.0 |
E-value |
1.0e-87 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FTM1 |
Definition |
tr|B4FTM1|B4FTM1_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
201 |
Score (bit) |
323.0 |
E-value |
4.0e-87 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953103|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_O05, 5' (610 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FTM1|B4FTM1_MAIZE Putative uncharacterized protein OS=Zea m... 323 4e-87 tr|A7KQH3|A7KQH3_EUCGR Beta-tubulin OS=Eucalyptus grandis GN=TUB... 321 2e-86 tr|Q0DA75|Q0DA75_ORYSJ Os06g0671900 protein OS=Oryza sativa subs... 320 3e-86 tr|A3BEJ5|A3BEJ5_ORYSJ cDNA clone:J023010B07, full insert sequen... 320 3e-86 tr|A2YG29|A2YG29_ORYSI Putative uncharacterized protein OS=Oryza... 320 3e-86 tr|Q10CU1|Q10CU1_ORYSJ Os03g0780600 protein OS=Oryza sativa subs... 320 4e-86 tr|A2XMI9|A2XMI9_ORYSI Putative uncharacterized protein OS=Oryza... 320 4e-86 tr|B8AY97|B8AY97_ORYSI Putative uncharacterized protein OS=Oryza... 320 5e-86 tr|A3B412|A3B412_ORYSJ Putative uncharacterized protein OS=Oryza... 320 5e-86 tr|Q0E3L8|Q0E3L8_ORYSJ Os02g0167300 protein OS=Oryza sativa subs... 319 7e-86 tr|A9PEU0|A9PEU0_POPTR Putative uncharacterized protein OS=Popul... 319 7e-86 tr|A2X1B6|A2X1B6_ORYSI Putative uncharacterized protein OS=Oryza... 319 7e-86 tr|Q676U1|Q676U1_9SOLA Beta-tubulin OS=Nicotiana attenuata GN=TU... 319 9e-86 tr|B8AAY0|B8AAY0_ORYSI Putative uncharacterized protein OS=Oryza... 319 9e-86 tr|A5ANL9|A5ANL9_VITVI Putative uncharacterized protein OS=Vitis... 319 9e-86 tr|Q38MV0|Q38MV0_SOLLC Beta-tubulin OS=Solanum lycopersicum GN=T... 318 1e-85 tr|B5M4B1|B5M4B1_SOLTU Beta-tubulin OS=Solanum tuberosum PE=2 SV=1 318 1e-85 tr|A7PH61|A7PH61_VITVI Chromosome chr17 scaffold_16, whole genom... 318 1e-85 tr|A5CFY8|A5CFY8_HORVD Beta tubulin 5 OS=Hordeum vulgare var. di... 318 1e-85 tr|A5CFY6|A5CFY6_HORVD Beta tubulin 3 OS=Hordeum vulgare var. di... 318 1e-85 tr|A4ZYP3|A4ZYP3_CAPAN Beta tubulin OS=Capsicum annuum PE=2 SV=1 318 1e-85 tr|Q8GZ16|Q8GZ16_ARATH Putative tubulin beta-1 chain (At1g75780)... 318 2e-85 tr|Q2TFP1|Q2TFP1_SOYBN Tubulin B4 OS=Glycine max PE=2 SV=1 318 2e-85 tr|A7PG08|A7PG08_VITVI Chromosome chr6 scaffold_15, whole genome... 318 2e-85 tr|A5CFY5|A5CFY5_HORVD Beta tubulin 2 OS=Hordeum vulgare var. di... 318 2e-85 tr|Q6TYR3|Q6TYR3_PHYPA Beta-tubulin 5 OS=Physcomitrella patens G... 317 3e-85 tr|Q0DI63|Q0DI63_ORYSJ Os05g0413200 protein OS=Oryza sativa subs... 317 3e-85 tr|A9SM68|A9SM68_PHYPA Predicted protein OS=Physcomitrella paten... 317 3e-85 tr|A9SKU2|A9SKU2_PHYPA Predicted protein OS=Physcomitrella paten... 317 3e-85 tr|Q6TYR5|Q6TYR5_PHYPA Beta-tubulin 3 OS=Physcomitrella patens G... 317 3e-85
>tr|B4FTM1|B4FTM1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 496
Score = 323 bits (829), Expect = 4e-87 Identities = 158/201 (78%), Positives = 168/201 (83%) Frame = +2
Query: 8 SRVPSAISIAPAAHL*AGELSSRKKMREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGS 187 SR+P AP A G + KMREILHIQGGQCGNQIG+KFWEV+CDEHGIDPTG Sbjct: 27 SRLPDLARSAPVASQ-FGSSHTSAKMREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGR 85
Query: 188 YKGDSELQLERINVYFNEASGGRYVPRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQS 367 Y G+S+LQLER+NVY+NEAS GR+VPRAVLMDLEPGTMDSVRTGP GQIFRPDNFVFGQS Sbjct: 86 YTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQS 145
Query: 368 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFEVCHXXXXXXXXXXXXXXISKI 547 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF+VCH ISKI Sbjct: 146 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 205
Query: 548 REEYPDRMMLTFSVFPSPKVS 610 REEYPDRMMLTFSVFPSPKVS Sbjct: 206 REEYPDRMMLTFSVFPSPKVS 226
>tr|A7KQH3|A7KQH3_EUCGR Beta-tubulin OS=Eucalyptus grandis GN=TUB4 PE=2 SV=1 Length = 449
Score = 321 bits (823), Expect = 2e-86 Identities = 153/176 (86%), Positives = 158/176 (89%) Frame = +2
Query: 83 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 262 MREILHIQGGQCGNQIG+KFWEVICDEHGID TG Y GDSELQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDATGKYNGDSELQLERINVYYNEASGGRYV 60
Query: 263 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 442 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 443 RKEAENCDCLQGFEVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS 610 RKEAENCDCLQGF+VCH ISKIREEYPDRMMLTFSVFPSPKVS Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
>tr|Q0DA75|Q0DA75_ORYSJ Os06g0671900 protein OS=Oryza sativa subsp. japonica GN=Os06g0671900 PE=3 SV=1 Length = 433
Score = 320 bits (821), Expect = 3e-86 Identities = 153/176 (86%), Positives = 158/176 (89%) Frame = +2
Query: 83 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 262 MREILHIQGGQCGNQIG+KFWEVICDEHGID TG Y GDS+LQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 263 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 442 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 443 RKEAENCDCLQGFEVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS 610 RKEAENCDCLQGF+VCH ISKIREEYPDRMMLTFSVFPSPKVS Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
>tr|A3BEJ5|A3BEJ5_ORYSJ cDNA clone:J023010B07, full insert sequence OS=Oryza sativa subsp. japonica GN=OsJ_021467 PE=2 SV=1 Length = 446
Score = 320 bits (821), Expect = 3e-86 Identities = 153/176 (86%), Positives = 158/176 (89%) Frame = +2
Query: 83 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 262 MREILHIQGGQCGNQIG+KFWEVICDEHGID TG Y GDS+LQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 263 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 442 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 443 RKEAENCDCLQGFEVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS 610 RKEAENCDCLQGF+VCH ISKIREEYPDRMMLTFSVFPSPKVS Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
>tr|A2YG29|A2YG29_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24075 PE=3 SV=1 Length = 446
Score = 320 bits (821), Expect = 3e-86 Identities = 153/176 (86%), Positives = 158/176 (89%) Frame = +2
Query: 83 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 262 MREILHIQGGQCGNQIG+KFWEVICDEHGID TG Y GDS+LQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 263 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 442 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 443 RKEAENCDCLQGFEVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS 610 RKEAENCDCLQGF+VCH ISKIREEYPDRMMLTFSVFPSPKVS Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
>tr|Q10CU1|Q10CU1_ORYSJ Os03g0780600 protein OS=Oryza sativa subsp. japonica GN=Os03g0780600 PE=2 SV=1 Length = 444
Score = 320 bits (820), Expect = 4e-86 Identities = 152/176 (86%), Positives = 158/176 (89%) Frame = +2
Query: 83 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 262 MREILHIQGGQCGNQIG+KFWEVICDEHG+D TG Y GDS+LQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 263 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 442 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 443 RKEAENCDCLQGFEVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS 610 RKEAENCDCLQGF+VCH ISKIREEYPDRMMLTFSVFPSPKVS Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
>tr|A2XMI9|A2XMI9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13743 PE=3 SV=1 Length = 444
Score = 320 bits (820), Expect = 4e-86 Identities = 152/176 (86%), Positives = 158/176 (89%) Frame = +2
Query: 83 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 262 MREILHIQGGQCGNQIG+KFWEVICDEHG+D TG Y GDS+LQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 263 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 442 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 443 RKEAENCDCLQGFEVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS 610 RKEAENCDCLQGF+VCH ISKIREEYPDRMMLTFSVFPSPKVS Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
>tr|B8AY97|B8AY97_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19960 PE=4 SV=1 Length = 624
Score = 320 bits (819), Expect = 5e-86 Identities = 152/178 (85%), Positives = 159/178 (89%) Frame = +2
Query: 77 KKMREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGR 256 +KMREILHIQGGQCGNQIGSKFWEV+CDEHGIDPTG Y G S+LQLER+NVY+NEAS GR Sbjct: 179 EKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGR 238
Query: 257 YVPRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 436 +VPRAVLMDLEPGTMDSVRTGP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD Sbjct: 239 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 298
Query: 437 VVRKEAENCDCLQGFEVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS 610 VVRKEAENCDCLQGF+VCH ISKIREEYPDRMMLTFSVFPSPKVS Sbjct: 299 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 356
>tr|A3B412|A3B412_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017784 PE=3 SV=1 Length = 624
Score = 320 bits (819), Expect = 5e-86 Identities = 152/178 (85%), Positives = 159/178 (89%) Frame = +2
Query: 77 KKMREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGR 256 +KMREILHIQGGQCGNQIGSKFWEV+CDEHGIDPTG Y G S+LQLER+NVY+NEAS GR Sbjct: 179 EKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGR 238
Query: 257 YVPRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 436 +VPRAVLMDLEPGTMDSVRTGP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD Sbjct: 239 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 298
Query: 437 VVRKEAENCDCLQGFEVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS 610 VVRKEAENCDCLQGF+VCH ISKIREEYPDRMMLTFSVFPSPKVS Sbjct: 299 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 356
>tr|Q0E3L8|Q0E3L8_ORYSJ Os02g0167300 protein OS=Oryza sativa subsp. japonica GN=Os02g0167300 PE=2 SV=1 Length = 447
Score = 319 bits (818), Expect = 7e-86 Identities = 152/176 (86%), Positives = 158/176 (89%) Frame = +2
Query: 83 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 262 MREILHIQGGQCGNQIG+KFWEVICDEHGID TG Y GDS+LQLERINVY+NEASGGR+V Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 263 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 442 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 443 RKEAENCDCLQGFEVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS 610 RKEAENCDCLQGF+VCH ISKIREEYPDRMMLTFSVFPSPKVS Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
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