DK953122
Clone id TST38A01NGRL0015_O24
Library
Length 587
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_O24. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GGTGCCTGCGGCCTCACTCAATTTTAACACTAATTTAGTGTGTAAGTCTATAATAACAAA
GTATTAATGTAGGAATATAAACTTAATTAAACATCGGAGTCAAATTTTGTACAATCTTTG
AAAGAAGAGAAGAAAAAAAACTTTTCTTTCACAACAAAGTTGTGAAAAGATGTCGGACCC
CCCTCTTGCTTATCTATTTACGGATGCAACGTAAAAGTGGTAATAAAAAGTAGATTTTTG
AGAATATCTTCCCAAATAGGGATTTTTGCTGGAAATCAATGTTTCCCATCCCAACCGGAT
TTGAGTTGTCTAAGCCACTTCTCCTTTTTCCAAATCAAATTGAATTGAATAGCAATAATT
ATTGCTAAATATTTTACCTGAGATACGGGTAGACTTTGGGAGTGGTTGAATAGCTACCTT
GTCACATGGAGTTGATATCATACTTTTTTTTTCTTTCTCTGTTCCCCTTCTTCACTCAGT
AAGGATAGAGAAATAAAGGATAAATAAATAGATTTGATTGATTACCAGCCTCGCTTCAGT
TTGTAGGAACTTACATTCAGCGATCGTCGCTAAATACGTACTATCTG
■■Homology search results ■■ -
sp_hit_id P59594
Definition sp|P59594|SPIKE_CVHSA Spike glycoprotein OS=Human SARS coronavirus
Align length 61
Score (bit) 30.8
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953122|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_O24, 5'
(587 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P59594|SPIKE_CVHSA Spike glycoprotein OS=Human SARS coronavir... 31 5.2
sp|Q3LZX1|SPIKE_BCHK3 Spike glycoprotein OS=Bat coronavirus HKU3... 30 8.9
sp|Q9QZE2|MIST_MOUSE Mast cell immunoreceptor signal transducer ... 30 8.9

>sp|P59594|SPIKE_CVHSA Spike glycoprotein OS=Human SARS coronavirus
GN=S PE=1 SV=1
Length = 1255

Score = 30.8 bits (68), Expect = 5.2
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Frame = +3

Query: 198 LRMQRKSGNKK*IFENIFPNRD---FCWKSMFPI------PTGFELSKPLLLFPNQIELN 350
L + KSGN K + E +F N+D + +K PI P+GF KP+ P I +
Sbjct: 170 LDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINIT 229

Query: 351 S 353
+
Sbjct: 230 N 230


>sp|Q3LZX1|SPIKE_BCHK3 Spike glycoprotein OS=Bat coronavirus HKU3
GN=S PE=3 SV=1
Length = 1242

Score = 30.0 bits (66), Expect = 8.9
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
Frame = +3

Query: 213 KSGNKK*IFENIFPNRDFCWKSMFP----------IPTGFELSKPLLLFPNQIELNS 353
K+GN K + E +F NRD + S++ +PTGF + KP+L P I + S
Sbjct: 179 KTGNFKDLREYVFKNRDG-FLSVYQTYTAVNLPRGLPTGFSVLKPILKLPFGINITS 234


>sp|Q9QZE2|MIST_MOUSE Mast cell immunoreceptor signal transducer
OS=Mus musculus GN=Mist PE=1 SV=1
Length = 435

Score = 30.0 bits (66), Expect = 8.9
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +1

Query: 118 LKEEKKKNFSFTTKL*KDVGPPSCLSIYGCNVKVVIKSRFLRISSQIGI---FAGNQCFP 288
+KE K F K P L ++ N +K RFL + Q + GN+ F
Sbjct: 324 MKENKDGTFLVRDCSTKSKAEPYVLVVFYGNKVYNVKIRFLESNQQFALGTGLRGNEMFD 383

Query: 289 SQPDLSCLSHFSFFQIKL 342
S D+ + H+++F I L
Sbjct: 384 SVEDI--IEHYTYFPILL 399


tr_hit_id A4VDC9
Definition tr|A4VDC9|A4VDC9_TETTH Myosin-10, putative OS=Tetrahymena thermophila SB210
Align length 67
Score (bit) 34.7
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953122|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_O24, 5'
(587 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4VDC9|A4VDC9_TETTH Myosin-10, putative OS=Tetrahymena thermo... 35 4.1

>tr|A4VDC9|A4VDC9_TETTH Myosin-10, putative OS=Tetrahymena
thermophila SB210 GN=TTHERM_00215884 PE=4 SV=1
Length = 1401

Score = 34.7 bits (78), Expect = 4.1
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = -3

Query: 498 LYFSILTE*RRGTEKEKKSMISTPCDKVAIQPLPKSTRISGKIFSNNYCYSIQFDLEKGE 319
LYFS++ +KKS+ S+ C ++IQ +P+ I +I N C I +EK
Sbjct: 116 LYFSLIQCPNSSLADKKKSVASSMCLSISIQSIPQLLIIDDRI---NICLQIMKPIEKTN 172

Query: 318 VA*TTQI 298
+A Q+
Sbjct: 173 IAAENQL 179