DK953167 |
Clone id |
TST39A01NGRL0017_A23 |
Library |
TST39 |
Length |
583 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_A23. 5' end sequence. |
Accession |
DK953167 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL30Contig1 |
Sequence |
TTCTCGGGTCTCAAGCTAGCCTCCTCCCCGCTTCCTTCCCACCACACCCAAGAGAAGAAG AAGAGAAGCAGTGGCAGCAGGAAGGCGCATCATGTCACTGCAACGGCAGCCGTGGAGGCT CCCCCCAAGACCGATGTCTCGTTGGTGGAGAAGAGCATCAATACTATCCGATTCTTGGCC GTTGATGCAGTTGAGAAGGCTAACTCTGGACACCCAGGTCTTCCCATGGGGTGTGCTCCG ATGGGCCACATTCTGTATGACGAGATCATGAGATACAACCCAAAAAATCCCTATTGGTTC AATCGCGACAGGTTCGTCCTTTCTGCGGGCCATGGTTGCATGTTGCAGTATGCACTTCTT CATCTTGCCGGCTACGACAGCGTCCAGGAGGAAGATCTGAAGCAATTCAGGCAATGGGAG AGCCGAACTCCTGGGCATCCTGAAAACTTTGAGACGCCTGGTGTGGAGGTTACTACAGGG CCCCTTGGCCAAGGTATTTGCAATGCCGTTGGATTAGCTCTGGCCGAGAAGCACCTGGCT GCCCGCTTCAACAAGCCAGATGCCACTGGTGGGGATCACTACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43848 |
Definition |
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum |
Align length |
194 |
Score (bit) |
293.0 |
E-value |
3.0e-79 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953167|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_A23, 5' (583 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 293 3e-79 sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 292 7e-79 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 290 3e-78 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 270 4e-72 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 253 5e-67 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 246 8e-65 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 195 2e-49 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 192 8e-49 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 192 8e-49 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 190 5e-48 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 187 3e-47 sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT... 185 1e-46 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 184 2e-46 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 183 6e-46 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 182 1e-45 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 182 1e-45 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 182 1e-45 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 182 1e-45 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 182 1e-45 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 182 1e-45 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 182 1e-45 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 182 1e-45 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 182 1e-45 sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneu... 181 2e-45 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 181 2e-45 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 181 2e-45 sp|Q8KA26|TKT_BUCAP Transketolase OS=Buchnera aphidicola subsp. ... 181 2e-45 sp|O83571|TKT_TREPA Transketolase OS=Treponema pallidum GN=tkt P... 181 2e-45 sp|P33570|TKT2_ECOLI Transketolase 2 OS=Escherichia coli (strain... 181 2e-45 sp|P27302|TKT1_ECOLI Transketolase 1 OS=Escherichia coli (strain... 179 1e-44
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 293 bits (751), Expect = 3e-79 Identities = 144/194 (74%), Positives = 158/194 (81%) Frame = +1
Query: 1 FSGLKLASSPLPSHHTQEKKKRSSGSRXXXXXXXXXXXXXXXXTDVSLVEKSINTIRFLA 180 FSGLK S+P S H + ++ ++ TD ++VEKS+NTIRFLA Sbjct: 36 FSGLK--STPFTSSHRRILPS-TTVTKQQFSVRASAAVETLEKTDAAIVEKSVNTIRFLA 92
Query: 181 VDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGCMLQYALL 360 +DAVEKANSGHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRDRFVLSAGHGCMLQYALL Sbjct: 93 IDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQYALL 152
Query: 361 HLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVGLALAEKHLA 540 HLAGYDSVQE+DLK FRQW SR PGHPENFETPGVEVTTGPLGQGI NAVGLA+AEKHLA Sbjct: 153 HLAGYDSVQEDDLKSFRQWGSRIPGHPENFETPGVEVTTGPLGQGIANAVGLAVAEKHLA 212
Query: 541 ARFNKPDATGGDHY 582 ARFNKPDA DHY Sbjct: 213 ARFNKPDAEIVDHY 226
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 292 bits (748), Expect = 7e-79 Identities = 135/147 (91%), Positives = 142/147 (96%) Frame = +1
Query: 142 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 321 L+EKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDE+MRYNPKNPYWFNRDRFVL Sbjct: 15 LLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVL 74
Query: 322 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 501 SAGHGCMLQYALLHLAGYDSV+EEDLKQFRQW SRTPGHPENFETPGVEVTTGPLGQGI Sbjct: 75 SAGHGCMLQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTTGPLGQGIA 134
Query: 502 NAVGLALAEKHLAARFNKPDATGGDHY 582 NAVGLALAEKHLAARFNKPD+ DHY Sbjct: 135 NAVGLALAEKHLAARFNKPDSEIVDHY 161
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 290 bits (743), Expect = 3e-78 Identities = 139/152 (91%), Positives = 142/152 (93%), Gaps = 1/152 (0%) Frame = +1
Query: 130 TDVS-LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 306 TD+ LVEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR Sbjct: 75 TDIDQLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 134
Query: 307 DRFVLSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPL 486 DRFVLSAGHGCMLQYALLHLAGYDSV EEDLK FRQW SR PGHPENFETPGVEVTTGPL Sbjct: 135 DRFVLSAGHGCMLQYALLHLAGYDSVLEEDLKTFRQWGSRIPGHPENFETPGVEVTTGPL 194
Query: 487 GQGICNAVGLALAEKHLAARFNKPDATGGDHY 582 GQGI NAVGLALAEKHLAARFNKPDA DHY Sbjct: 195 GQGIANAVGLALAEKHLAARFNKPDAEIVDHY 226
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 270 bits (690), Expect = 4e-72 Identities = 124/147 (84%), Positives = 134/147 (91%) Frame = +1
Query: 142 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 321 LV KS+NTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVL Sbjct: 13 LVSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVL 72
Query: 322 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 501 SAGHGCMLQYALLHL+GYDSV+EEDLK RQW SRTP HPENFETPGVEVTTGPLGQGI Sbjct: 73 SAGHGCMLQYALLHLSGYDSVKEEDLKSLRQWGSRTPAHPENFETPGVEVTTGPLGQGIA 132
Query: 502 NAVGLALAEKHLAARFNKPDATGGDHY 582 +AVGLA+AEKHLAAR+NKP DHY Sbjct: 133 SAVGLAVAEKHLAARYNKPGFEIVDHY 159
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 253 bits (646), Expect = 5e-67 Identities = 116/147 (78%), Positives = 128/147 (87%) Frame = +1
Query: 142 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 321 LV KS+NTIRFLA+DAVE SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVL Sbjct: 17 LVVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVL 76
Query: 322 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 501 SAGHG ML Y LLHLAGYDSV+ EDLK RQW S+TP HPENFETPGVEVTTGPLGQG+ Sbjct: 77 SAGHGAMLLYGLLHLAGYDSVKVEDLKGLRQWGSKTPAHPENFETPGVEVTTGPLGQGVG 136
Query: 502 NAVGLALAEKHLAARFNKPDATGGDHY 582 +AVGLALAEKHL AR+NKPD DHY Sbjct: 137 SAVGLALAEKHLGARYNKPDFEMVDHY 163
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 246 bits (627), Expect = 8e-65 Identities = 117/148 (79%), Positives = 126/148 (85%) Frame = +1
Query: 139 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 318 SL E SIN IRFLAVDA+EKA SGHPGLPMG APM +L++ MRYNPKNP WFNRDRFV Sbjct: 7 SLEELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFV 66
Query: 319 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGI 498 LSAGHG MLQYALL+L GYDSV ED+KQFRQWES+TPGHPENF T GVEVTTGPLGQGI Sbjct: 67 LSAGHGSMLQYALLYLTGYDSVSIEDIKQFRQWESKTPGHPENFMTAGVEVTTGPLGQGI 126
Query: 499 CNAVGLALAEKHLAARFNKPDATGGDHY 582 N VGLA+AE HLAA+FNKPDA DHY Sbjct: 127 ANGVGLAIAEAHLAAKFNKPDAKIVDHY 154
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 195 bits (495), Expect = 2e-49 Identities = 91/143 (63%), Positives = 111/143 (77%) Frame = +1
Query: 154 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 333 ++NTIR L++D+VEKANSGHPG+PMG APM L+ + M +NP NP W NRDRFVLSAGH Sbjct: 9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGH 68
Query: 334 GCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVG 513 G ML Y+LLHL GYD + E+L+ FRQW S+TPGHPE TPGVE TTGPLGQG+ AVG Sbjct: 69 GSMLLYSLLHLTGYD-LSLEELQNFRQWGSKTPGHPEYGHTPGVEATTGPLGQGVAMAVG 127
Query: 514 LALAEKHLAARFNKPDATGGDHY 582 +A+AE+HLAA +N+ DHY Sbjct: 128 MAMAERHLAATYNRDGYNIVDHY 150
>sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes serotype M18 GN=tkt PE=3 SV=1 Length = 729
Score = 192 bits (489), Expect = 8e-49 Identities = 92/144 (63%), Positives = 111/144 (77%), Gaps = 1/144 (0%) Frame = +1
Query: 154 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPY-WFNRDRFVLSAG 330 ++NT+R L++DA++ ANSGHPGLPMG APM ++L++ M NPK W NRDRF+LSAG Sbjct: 78 AVNTVRTLSMDAIQAANSGHPGLPMGAAPMAYVLWNHFMNINPKTSRNWSNRDRFILSAG 137
Query: 331 HGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAV 510 HG + Y+LLHLAGYD + EDLK FRQW S+TPGHPE T GVE TTGPLGQGI NAV Sbjct: 138 HGSAMLYSLLHLAGYD-LSVEDLKNFRQWGSKTPGHPEVNHTDGVEATTGPLGQGIANAV 196
Query: 511 GLALAEKHLAARFNKPDATGGDHY 582 G+A+AE HLAA+FNKP DHY Sbjct: 197 GMAMAEAHLAAKFNKPGFDIVDHY 220
>sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes serotype M6 GN=tkt PE=1 SV=1 Length = 729
Score = 192 bits (489), Expect = 8e-49 Identities = 92/144 (63%), Positives = 111/144 (77%), Gaps = 1/144 (0%) Frame = +1
Query: 154 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPY-WFNRDRFVLSAG 330 ++NT+R L++DA++ ANSGHPGLPMG APM ++L++ M NPK W NRDRF+LSAG Sbjct: 78 AVNTVRTLSMDAIQAANSGHPGLPMGAAPMAYVLWNHFMNINPKTSRNWSNRDRFILSAG 137
Query: 331 HGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAV 510 HG + Y+LLHLAGYD + EDLK FRQW S+TPGHPE T GVE TTGPLGQGI NAV Sbjct: 138 HGSAMLYSLLHLAGYD-LSVEDLKNFRQWGSKTPGHPEVNHTDGVEATTGPLGQGIANAV 196
Query: 511 GLALAEKHLAARFNKPDATGGDHY 582 G+A+AE HLAA+FNKP DHY Sbjct: 197 GMAMAEAHLAAKFNKPGFDIVDHY 220
>sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2 Length = 667
Score = 190 bits (482), Expect = 5e-48 Identities = 89/148 (60%), Positives = 113/148 (76%) Frame = +1
Query: 139 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 318 ++ +KS+ TIR L++DA+EKANSGHPG+PMG APM + L+ + M +P NP WFNRDRFV Sbjct: 3 TIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFV 62
Query: 319 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGI 498 LSAGHG L Y++LHL+G+D + EDLK FRQW S+TPGHPE T GV+ TTGPLGQGI Sbjct: 63 LSAGHGSALLYSMLHLSGFD-LSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGI 121
Query: 499 CNAVGLALAEKHLAARFNKPDATGGDHY 582 AVG+A+AE+HLA +N+ DHY Sbjct: 122 AMAVGMAIAERHLAETYNRDSFNVVDHY 149
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P7Z7 |
Definition |
tr|A9P7Z7|A9P7Z7_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
194 |
Score (bit) |
300.0 |
E-value |
4.0e-80 |
Report |
|