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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953170
Clone id TST39A01NGRL0017_B02
Library
Length 644
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_B02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCCAGTCGCGAGCAGTCGAGCACTTTGAAGGAAGCAGAGAGAAGGAGAGGGGGCCCGAGA
GGGAGAAGCTCGTGTTTGTTTGCAGAAATGGCTGCCATGCAGGCGACATTGGGCGTTTCC
TGCCCTTCTTCGTCTCTATGCAAGTCGTCTTTCTTGGGGAGCGCCTCTCGTCTTTCTCGG
GTGGCCTCTGCTATTGCCCCTTCCCCTGTCCGTGCCTTCAAGGTCGAGGCAAAGAAAGGC
GAATGGCTTCCCGGTCTGGCATCCCCTGCTTACCTAGACGGAAACCTTGCTGGTGACAAT
GGCTTCGACCCCCTTGGCTTGGCTGAGGATCCTGCCAACCTTAAATGGTATGTGCAAGCA
GAGCTTCAAAATGGAAGATGGGCAATGCTTGGAGTAGCTGGCATGTTGATCCCCGACCTC
TTGACAAAGATTGGTATCATCAATGTTCCTGCATGGTATGATGCGGGCAAGGTCGAGTAC
TTCGCCCCCGCCTCCACTCTCTTTGTGATCGAATTCATCTTGTTCCACTATGTGGAGGTG
AGAAGATGGCAAGACATCAAGTTACCCTGGCAGTGTGAATGCCGATCCGTTCAACCCTAA
GCTTACTCTGCCCCCTGGCGAGGTTGGATACCCTGGAGGCATCT
■■Homology search results ■■ -
sp_hit_id P27521
Definition sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana
Align length 118
Score (bit) 216.0
E-value 6.0e-62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953170|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_B02, 5'
         (644 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   216   6e-62
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   209   4e-60
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   154   1e-41
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   147   7e-39
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   142   2e-37
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    94   8e-19
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    91   7e-18
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...    89   2e-17
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    86   2e-16
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    85   3e-16
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    81   4e-15
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    75   3e-13
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    68   5e-11
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    66   1e-10
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    66   2e-10
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    65   4e-10
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    62   2e-09
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    62   3e-09
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    61   6e-09
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   2e-08
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...    59   2e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    59   2e-08
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...    59   2e-08
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    59   2e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    59   3e-08
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    59   3e-08
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    58   4e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    58   4e-08
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    58   5e-08
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    58   5e-08

>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  216 bits (549), Expect(2) = 6e-62
 Identities = 100/118 (84%), Positives = 109/118 (92%)
 Frame = +1

Query: 214 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLG 393
           +FKVEAKKGEWLPGLASP YL G+LAGDNGFDPLGLAEDP NLKW+VQAEL NGRWAMLG
Sbjct: 47  SFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLG 106

Query: 394 VAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKLP 567
           VAGML+P++ TKIGIINVP WYDAGK +YFA +STLFVIEFILFHYVE+RRWQDIK P
Sbjct: 107 VAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNP 164



 Score = 42.0 bits (97), Expect(2) = 6e-62
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +2

Query: 566 PGSVNADPFNPKLTLPPGEVGYPGGI 643
           PGSVN DP   + +LP GEVGYPGGI
Sbjct: 164 PGSVNQDPIFKQYSLPKGEVGYPGGI 189


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  209 bits (533), Expect(2) = 4e-60
 Identities = 98/122 (80%), Positives = 107/122 (87%)
 Frame = +1

Query: 202 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 381
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NL+W+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRW 101

Query: 382 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 561
           AMLGVAGML+P++ T IGIINVP WY AGK EYFA +STLFVIEFIL HYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIK 161

Query: 562 LP 567
            P
Sbjct: 162 NP 163



 Score = 42.0 bits (97), Expect(2) = 4e-60
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +2

Query: 566 PGSVNADPFNPKLTLPPGEVGYPGGI 643
           PGSVN DP   + +LP GEVGYPGGI
Sbjct: 163 PGSVNQDPIFKQYSLPAGEVGYPGGI 188


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  154 bits (388), Expect(2) = 1e-41
 Identities = 80/132 (60%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = +1

Query: 175 SRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYV 354
           S  AS    S  R   V+AK G WLPGL SPAYLDG+L GDNGFDPL LAEDP +L+W+V
Sbjct: 14  SPAASGSPRSTRRDVAVQAK-GSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFV 72

Query: 355 QAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYD-AGKVEYFAPASTLFVIEFILFHY 531
           QA++ NGRWAMLGVAGMLIP++LTK G++N P W    GK  YFA +ST   +  +   Y
Sbjct: 73  QADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTY 131

Query: 532 VEVRRWQDIKLP 567
           VE+RRWQDIK P
Sbjct: 132 VEIRRWQDIKNP 143



 Score = 36.2 bits (82), Expect(2) = 1e-41
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 566 PGSVNADPFNPKLTLPPGEVGYPGGI 643
           PGSVN DP     +LPP E GYPG +
Sbjct: 143 PGSVNQDPIFKSYSLPPHECGYPGRV 168


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  147 bits (372), Expect(2) = 7e-39
 Identities = 72/135 (53%), Positives = 88/135 (65%), Gaps = 5/135 (3%)
 Frame = +1

Query: 178 RVASAIAPSPVRAFKVEAKKGE-----WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL 342
           RV+  IAP   R+  V A   +     W PG   P +LDG+L GD GFDPLGL  DP +L
Sbjct: 41  RVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL 100

Query: 343 KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFIL 522
           KW  QAEL + RWAMLG AG+ IP+ LTKIG++N P+WY AG+ EYF   +TLFVIE +L
Sbjct: 101 KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVL 160

Query: 523 FHYVEVRRWQDIKLP 567
             + E RRW DI  P
Sbjct: 161 IGWAEGRRWADIIKP 175



 Score = 33.1 bits (74), Expect(2) = 7e-39
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 566 PGSVNADPFNPKLTLPPGEVGYPGGI 643
           PG VN DP  P   L   +VGYPGG+
Sbjct: 175 PGCVNTDPIFPNNKLTGTDVGYPGGL 200



 Score = 33.9 bits (76), Expect = 0.74
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 277 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 444
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  142 bits (359), Expect(2) = 2e-37
 Identities = 64/108 (59%), Positives = 79/108 (73%)
 Frame = +1

Query: 244 WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLL 423
           W PG   P +LDG+L GD GFDPLGLA DP +L+W  QAEL + RWAMLG AG+ IP+LL
Sbjct: 68  WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELL 127

Query: 424 TKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKLP 567
           TKIGI+N P+WY AG+ EYF   +TLF++E +L  + E RRW DI  P
Sbjct: 128 TKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKP 175



 Score = 33.1 bits (74), Expect(2) = 2e-37
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 566 PGSVNADPFNPKLTLPPGEVGYPGGI 643
           PG VN DP  P   L   +VGYPGG+
Sbjct: 175 PGCVNTDPIFPNNKLTGTDVGYPGGL 200



 Score = 33.9 bits (76), Expect = 0.74
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 277 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 444
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 93.6 bits (231), Expect = 8e-19
 Identities = 62/157 (39%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
 Frame = +1

Query: 175 SRVASAIAPSPVRAFKVEAKKGEWLPG------LASPAYLDGNLAGDNGFDPLGLAEDPA 336
           +RV  A  P         AKK  W+P       L  P +LDG+L GD GFDPLGL +DPA
Sbjct: 33  ARVGGAATPKRFTVLAAAAKKS-WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 91

Query: 337 NLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFV 507
            LKWY +AEL +GRWAM  V G+ +    + I       W++AG      AP S  TL  
Sbjct: 92  FLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLG 145

Query: 508 IEFILFHYVEVRRWQDIKLPWQCECRSVQP*AYSAPW 618
            + IL  +VE +RW D   P   + +SV+   ++ PW
Sbjct: 146 TQLILMGWVESKRWVDFFDP---DSQSVE---WATPW 176


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 90.5 bits (223), Expect = 7e-18
 Identities = 57/136 (41%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
 Frame = +1

Query: 229 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 390
           A K  W+P +        P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAML
Sbjct: 55  APKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAML 114

Query: 391 GVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKLPW 570
            V G+ +    T  GI    A  D G V  F+   TL   + +L  +VE +RW D   P 
Sbjct: 115 AVLGIFVGQAWT--GIPWFEAGADPGAVAPFS-FGTLLGTQLLLMGWVESKRWVDFFDP- 170

Query: 571 QCECRSVQP*AYSAPW 618
             + +SV+   ++ PW
Sbjct: 171 --DSQSVE---WATPW 181


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score = 89.0 bits (219), Expect = 2e-17
 Identities = 60/148 (40%), Positives = 76/148 (51%), Gaps = 15/148 (10%)
 Frame = +1

Query: 169 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL-- 342
           + S V  A +  PV   K  A +  W     S +YLDG L GD GFDPLGL+ DP     
Sbjct: 34  KASFVVRAASTPPV---KQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89

Query: 343 ----KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYF 483
               KW    E+ NGR+AMLG AG + P++L K G+I      AW+       AG   Y+
Sbjct: 90  FIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYW 149

Query: 484 APASTLFVIEFILFHYVEVRRWQDIKLP 567
           A   TLFV+E  L  + E RR+QD   P
Sbjct: 150 ADNYTLFVLEMALMGFAEHRRFQDWAKP 177



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +1

Query: 247 LPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLT 426
           L G   PAY  G L     F+PLG  +D  ++K     E++NGR AML + G  I  L+T
Sbjct: 192 LGGSGDPAYPGGPL-----FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVT 246

Query: 427 KIG 435
            +G
Sbjct: 247 GVG 249


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score = 85.9 bits (211), Expect = 2e-16
 Identities = 56/141 (39%), Positives = 74/141 (52%), Gaps = 15/141 (10%)
 Frame = +1

Query: 190 AIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL------KWY 351
           A A  PV+   V+  +  W     S +YLDG+L GD GFDPLGL+ DP         +W 
Sbjct: 42  AAATPPVKQGGVD--RPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWL 98

Query: 352 VQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYFAPASTLF 504
              E+ NGR+AMLG  G + P+ L K+G+I      AW+       AG   Y+A   TLF
Sbjct: 99  AYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 158

Query: 505 VIEFILFHYVEVRRWQDIKLP 567
           V+E  L  + E RR+QD   P
Sbjct: 159 VLEMALMGFAEHRRFQDWAKP 179



 Score = 42.4 bits (98), Expect = 0.002
 Identities = 24/61 (39%), Positives = 33/61 (54%)
 Frame = +1

Query: 253 GLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKI 432
           G  +PAY  G       F+PLG  +D  +LK     E++NGR AML + G  I  L+T +
Sbjct: 196 GSGNPAYPGGPF-----FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGV 250

Query: 433 G 435
           G
Sbjct: 251 G 251


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 85.1 bits (209), Expect = 3e-16
 Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
 Frame = +1

Query: 229 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 390
           A K  W+P + S      P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAM 
Sbjct: 50  APKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 109

Query: 391 GVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFVIEFILFHYVEVRRWQD 555
            V G+ +    + I       W++AG      AP S  +L   + +L  +VE +RW D
Sbjct: 110 AVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVD 161
tr_hit_id Q07489
Definition tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I OS=Pinus sylvestris
Align length 157
Score (bit) 221.0
E-value 2.0e-63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953170|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_B02, 5'
         (644 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-har...   221   2e-63
tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of light-har...   219   4e-63
tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea...   218   2e-62
tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromos...   219   6e-62
tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein ...   214   1e-61
tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding prote...   221   2e-61
tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medic...   217   3e-61
tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta ...   213   3e-60
tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12) ...   211   1e-59
tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanu...   214   2e-59
tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Popul...   213   4e-59
tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11) ...   213   5e-59
tr|B6SZR1|B6SZR1_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   211   5e-58
tr|B4FV94|B4FV94_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   208   3e-57
tr|B6TNZ8|B6TNZ8_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   206   2e-56
tr|B6TFT2|B6TFT2_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   204   5e-56
tr|B8LS59|B8LS59_BAMOL Photosystem I light-harvesting complex ty...   205   1e-55
tr|Q6YWJ7|Q6YWJ7_ORYSJ Os08g0435900 protein OS=Oryza sativa subs...   201   1e-54
tr|A2YVJ1|A2YVJ1_ORYSI Putative uncharacterized protein OS=Oryza...   201   1e-54
tr|Q40481|Q40481_TOBAC Light-harvesting chlorophyll a /b binding...   196   3e-54
tr|Q9LKC7|Q9LKC7_HORVU Chlorophyll a/b-binding protein (Fragment...   197   6e-54
tr|Q6SYB3|Q6SYB3_ORYSJ Chlorophyll a/b binding protein presusor ...   201   2e-53
tr|A2YVI8|A2YVI8_ORYSI Putative uncharacterized protein OS=Oryza...   198   2e-53
tr|Q9ZSU1|Q9ZSU1_ORYSA Chlorophyll a/b-binding protein presursor...   199   1e-52
tr|B6DYZ9|B6DYZ9_LIQST Chloroplast chlorophyll a-b binding prote...   174   2e-46
tr|B6DZ35|B6DZ35_9MAGN Chloroplast chlorophyll a-b binding prote...   173   5e-46
tr|B6DZ26|B6DZ26_9MAGN Chloroplast chlorophyll a-b binding prote...   172   6e-46
tr|B6DZ24|B6DZ24_9MAGN Chloroplast chlorophyll a-b binding prote...   172   6e-46
tr|B6DZ20|B6DZ20_9MAGN Chloroplast chlorophyll a-b binding prote...   172   6e-46
tr|B6DZ12|B6DZ12_9MAGN Chloroplast chlorophyll a-b binding prote...   172   6e-46

>tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I OS=Pinus
           sylvestris GN=Lhca4*1-1 PE=2 SV=1
          Length = 251

 Score =  221 bits (563), Expect(2) = 2e-63
 Identities = 111/157 (70%), Positives = 124/157 (78%), Gaps = 1/157 (0%)
 Frame = +1

Query: 100 QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 276
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSAFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 277 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 456
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSIGLINVPKW 125

Query: 457 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKLP 567
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIK P
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYP 162



 Score = 45.4 bits (106), Expect(2) = 2e-63
 Identities = 19/27 (70%), Positives = 21/27 (77%)
 Frame = +2

Query: 563 YPGSVNADPFNPKLTLPPGEVGYPGGI 643
           YPGSVN DP   + +LPP EVGYPGGI
Sbjct: 161 YPGSVNQDPLFKQYSLPPNEVGYPGGI 187


>tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I (Fragment)
           OS=Pinus sylvestris GN=Lhca4*1-2 PE=2 SV=1
          Length = 244

 Score =  219 bits (559), Expect(2) = 4e-63
 Identities = 104/130 (80%), Positives = 116/130 (89%)
 Frame = +1

Query: 178 RVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQ 357
           RV     P+P R+FKVEAK GEWLPGL+SP+YL+G+L GDNGFDPLGLAEDP +LKWYVQ
Sbjct: 27  RVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQ 85

Query: 358 AELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVE 537
           AEL NGRWAMLGVAGMLIP++LT IG+INVP WYDAGKVEYFA +STLFVIEFILFHYVE
Sbjct: 86  AELVNGRWAMLGVAGMLIPEVLTSIGLINVPKWYDAGKVEYFASSSTLFVIEFILFHYVE 145

Query: 538 VRRWQDIKLP 567
           +RRWQDIK P
Sbjct: 146 LRRWQDIKYP 155



 Score = 45.4 bits (106), Expect(2) = 4e-63
 Identities = 19/27 (70%), Positives = 21/27 (77%)
 Frame = +2

Query: 563 YPGSVNADPFNPKLTLPPGEVGYPGGI 643
           YPGSVN DP   + +LPP EVGYPGGI
Sbjct: 154 YPGSVNQDPLFKQYSLPPNEVGYPGGI 180


>tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 251

 Score =  218 bits (556), Expect(2) = 2e-62
 Identities = 110/157 (70%), Positives = 122/157 (77%), Gaps = 1/157 (0%)
 Frame = +1

Query: 100 QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 276
           QATLGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP YL
Sbjct: 7   QATLGVSCRSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPTYL 65

Query: 277 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 456
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT  G I+VP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSFGFIDVPKW 125

Query: 457 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKLP 567
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIK P
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYP 162



 Score = 44.7 bits (104), Expect(2) = 2e-62
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = +2

Query: 563 YPGSVNADPFNPKLTLPPGEVGYPGGI 643
           YPGSVN DP     +LPP EVGYPGGI
Sbjct: 161 YPGSVNQDPVFKNYSLPPNEVGYPGGI 187


>tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromosome
           chr17 scaffold_12, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00016319001 PE=4 SV=1
          Length = 252

 Score =  219 bits (557), Expect(2) = 6e-62
 Identities = 101/122 (82%), Positives = 110/122 (90%)
 Frame = +1

Query: 202 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 381
           S  R+FKVEAKKGEWLPGL+SP+YLDG+L GDNGFDPLGLAEDP NLKWYVQAEL N RW
Sbjct: 42  SSYRSFKVEAKKGEWLPGLSSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRW 101

Query: 382 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 561
           AMLGVAGML+P++ TKIGIIN P WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 562 LP 567
            P
Sbjct: 162 NP 163



 Score = 42.4 bits (98), Expect(2) = 6e-62
 Identities = 18/26 (69%), Positives = 19/26 (73%)
 Frame = +2

Query: 566 PGSVNADPFNPKLTLPPGEVGYPGGI 643
           PGSVN DP     +LPP EVGYPGGI
Sbjct: 163 PGSVNQDPIFKNYSLPPNEVGYPGGI 188


>tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein
           type 4 OS=Pinus pinaster PE=2 SV=1
          Length = 251

 Score =  214 bits (546), Expect(2) = 1e-61
 Identities = 108/157 (68%), Positives = 121/157 (77%), Gaps = 1/157 (0%)
 Frame = +1

Query: 100 QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 276
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 277 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 456
           +G+L GDNG DPLGLAEDP +LKWYVQAEL NGRWAMLGVAGM IP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGXDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMXIPEVLTSIGLINVPKW 125

Query: 457 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKLP 567
           YDAGKVEYFA + TLFVIEFILFHYVE+RRWQDIK P
Sbjct: 126 YDAGKVEYFASSXTLFVIEFILFHYVELRRWQDIKYP 162



 Score = 45.8 bits (107), Expect(2) = 1e-61
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = +2

Query: 563 YPGSVNADPFNPKLTLPPGEVGYPGGI 643
           YPGSVN DP     +LPP EVGYPGGI
Sbjct: 161 YPGSVNQDPIXKSYSLPPNEVGYPGGI 187


>tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding protein
           OS=Capsicum annuum PE=2 SV=1
          Length = 250

 Score =  221 bits (562), Expect(2) = 2e-61
 Identities = 103/133 (77%), Positives = 115/133 (86%)
 Frame = +1

Query: 169 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKW 348
           +L+R  S    +   +FKVEAKKGEWLPGLASPAYLDG+L GDNGFDPLGLAEDP NLKW
Sbjct: 29  KLNREVSFRPSTSNNSFKVEAKKGEWLPGLASPAYLDGSLPGDNGFDPLGLAEDPENLKW 88

Query: 349 YVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFH 528
           Y+QAEL NGRWAMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFH
Sbjct: 89  YIQAELVNGRWAMLGVAGMLLPEVFTSIGILNVPKWYDAGKAEYFASSSTLFVIEFILFH 148

Query: 529 YVEVRRWQDIKLP 567
           YVE+RRWQDIK P
Sbjct: 149 YVEIRRWQDIKNP 161



 Score = 38.5 bits (88), Expect(2) = 2e-61
 Identities = 16/26 (61%), Positives = 17/26 (65%)
 Frame = +2

Query: 566 PGSVNADPFNPKLTLPPGEVGYPGGI 643
           PG VN DP     +LPP E GYPGGI
Sbjct: 161 PGCVNQDPIFKNYSLPPNECGYPGGI 186


>tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 253

 Score =  217 bits (552), Expect(2) = 3e-61
 Identities = 101/122 (82%), Positives = 109/122 (89%)
 Frame = +1

Query: 202 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 381
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NLKW+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRW 101

Query: 382 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 561
           AMLGVAGML+P++ T IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 562 LP 567
            P
Sbjct: 162 NP 163



 Score = 42.0 bits (97), Expect(2) = 3e-61
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +2

Query: 566 PGSVNADPFNPKLTLPPGEVGYPGGI 643
           PGSVN DP   + +LP GEVGYPGGI
Sbjct: 163 PGSVNQDPIFKQYSLPKGEVGYPGGI 188


>tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta
           vulgaris GN=cab11 PE=2 SV=1
          Length = 252

 Score =  213 bits (542), Expect(2) = 3e-60
 Identities = 99/122 (81%), Positives = 109/122 (89%)
 Frame = +1

Query: 202 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 381
           S   + KVEAKKGEWLPGLASPAYL+G+L GDNGFDPL LAEDP NLKW+VQAEL NGRW
Sbjct: 42  SSTNSLKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRW 101

Query: 382 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 561
           AMLGVAGML+P++ T+IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTQIGIINVPKWYDAGKQEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 562 LP 567
            P
Sbjct: 162 NP 163



 Score = 42.7 bits (99), Expect(2) = 3e-60
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +2

Query: 566 PGSVNADPFNPKLTLPPGEVGYPGGI 643
           PGSVN DP   + +LPP EVGYPGGI
Sbjct: 163 PGSVNQDPIFKQYSLPPNEVGYPGGI 188


>tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12)
           OS=Solanum lycopersicum PE=4 SV=1
          Length = 250

 Score =  211 bits (537), Expect(2) = 1e-59
 Identities = 95/118 (80%), Positives = 108/118 (91%)
 Frame = +1

Query: 214 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLG 393
           +FKVEAKKGEWLPGL SP YL+G+LAGDNGFDPLGLAEDP NL+W+VQAEL NGRWAMLG
Sbjct: 45  SFKVEAKKGEWLPGLTSPTYLNGSLAGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLG 104

Query: 394 VAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKLP 567
           VAGML+P++ T IG++NVP WYDAGK +YFA +STLFVIEFILFHYVE+RRWQDIK P
Sbjct: 105 VAGMLLPEVFTSIGLLNVPKWYDAGKSDYFASSSTLFVIEFILFHYVEIRRWQDIKNP 162



 Score = 42.4 bits (98), Expect(2) = 1e-59
 Identities = 18/26 (69%), Positives = 19/26 (73%)
 Frame = +2

Query: 566 PGSVNADPFNPKLTLPPGEVGYPGGI 643
           PGSVN DP     +LPP EVGYPGGI
Sbjct: 162 PGSVNQDPIFKSYSLPPNEVGYPGGI 187


>tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanum
           tuberosum GN=cab1 PE=2 SV=1
          Length = 251

 Score =  214 bits (545), Expect(2) = 2e-59
 Identities = 98/122 (80%), Positives = 109/122 (89%)
 Frame = +1

Query: 202 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 381
           S   +FKVEAKKG+WLPGLASP YLDG+L GDNGFDPLGLAEDP NLKW++QAEL NGRW
Sbjct: 42  SSYNSFKVEAKKGQWLPGLASPDYLDGSLPGDNGFDPLGLAEDPENLKWFIQAELVNGRW 101

Query: 382 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 561
           AMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGILNVPKWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 562 LP 567
            P
Sbjct: 162 NP 163



 Score = 38.9 bits (89), Expect(2) = 2e-59
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +2

Query: 566 PGSVNADPFNPKLTLPPGEVGYPGGI 643
           PGSVN DP     +LPP + GYPGGI
Sbjct: 163 PGSVNQDPIFKSYSLPPNKCGYPGGI 188