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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953181
Clone id TST39A01NGRL0017_B13
Library
Length 474
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_B13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CAACATCTCTGAGGCATGGCCAGTTTTTGTCACCCGCAGGGATTTTCCATACAAACAAAG
CAGGTCTCTGTTCACCATAGTAGACCCTATTGGGTGCCTGAGGTGCATCATACCCGTACC
TTGTCAGTTTCCTCAACACATGCATCGTTATTTTCATTTCTCTGTGATGGGTACTGTAGG
GAGTAAGGTCTTGATTTCAGTCGTACTGGATACGGCCAAGGATGAAACGCAGCTTCAGCT
GATGCAAGGTGTGTATAGCTTTGATGGCTTGAGTATGAAGTGGGAGGACGCATTGTACTC
ATCTCTACCCACCACATTAACCCCAACCTTGAAGCAGACAAGCGCCATTGCCGTGGACAT
GAATGGGGGCTATCTGTATGTGGCAGGCGGCTATGGCCAGCGTGGAGATGATTATATGGA
AGGAGCAGGAAGGTTAGACATCAAGACAAAGATGTGGGAGGCATTGCCAGATCC
■■Homology search results ■■ -
sp_hit_id Q09563
Definition sp|Q09563|YR47_CAEEL Kelch repeat and BTB domain-containing protein F47D12.7 OS=Caenorhabditis elegans
Align length 41
Score (bit) 40.0
E-value 0.005
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953181|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_B13, 5'
         (474 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q09563|YR47_CAEEL Kelch repeat and BTB domain-containing prot...    40   0.005
sp|P34569|KEL10_CAEEL Kelch repeat-containing protein kel-10 OS=...    37   0.058
sp|O80502|FBK47_ARATH F-box/Kelch-repeat protein At2g44630 OS=Ar...    33   0.84 
sp|P06726|PP71_HCMVA 71 kDa phosphoprotein OS=Human cytomegalovi...    32   1.4  
sp|Q3E8Y7|FK114_ARATH Putative F-box/Kelch-repeat protein At5g28...    32   1.4  
sp|P0C2F7|Y1947_ARATH Kelch repeat-containing protein At1g19470 ...    31   2.4  
sp|Q3E8Y5|FK115_ARATH Putative F-box/Kelch-repeat protein At5g28...    31   2.4  
sp|Q38J84|IL2RB_PANTR Interleukin-2 receptor subunit beta OS=Pan...    30   4.2  
sp|O65704|FBK83_ARATH Putative F-box/Kelch-repeat protein At4g19...    30   4.2  
sp|O82378|FBK37_ARATH Putative F-box/Kelch-repeat protein At2g29...    30   4.2  
sp|Q9ZW38|FBK36_ARATH F-box/Kelch-repeat protein At2g29600 OS=Ar...    30   5.4  
sp|Q7Z7G0|TARSH_HUMAN Target of Nesh-SH3 OS=Homo sapiens GN=ABI3...    30   7.1  
sp|Q8ZQD5|FTSK_SALTY DNA translocase ftsK OS=Salmonella typhimur...    30   7.1  
sp|Q8Z814|FTSK_SALTI DNA translocase ftsK OS=Salmonella typhi GN...    30   7.1  
sp|Q84RE1|FBK48_ARATH F-box/Kelch-repeat protein At2g44700 OS=Ar...    30   7.1  
sp|O82390|ANTR1_ARATH Sodium-dependent phosphate transport prote...    30   7.1  
sp|P26896|IL2RB_RAT Interleukin-2 receptor subunit beta OS=Rattu...    29   9.3  
sp|Q38J85|IL2RB_MACFA Interleukin-2 receptor subunit beta OS=Mac...    29   9.3  
sp|P14784|IL2RB_HUMAN Interleukin-2 receptor subunit beta OS=Hom...    29   9.3  
sp|P47039|BNA3_YEAST Probable kynurenine--oxoglutarate transamin...    29   9.4  

>sp|Q09563|YR47_CAEEL Kelch repeat and BTB domain-containing protein
           F47D12.7 OS=Caenorhabditis elegans GN=F47D12.7 PE=2 SV=1
          Length = 579

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 19/41 (46%), Positives = 28/41 (68%)
 Frame = +2

Query: 350 AVDMNGGYLYVAGGYGQRGDDYMEGAGRLDIKTKMWEALPD 472
           A  M+  Y+YVAGG+   G    + + RLD+++KMW+ALPD
Sbjct: 506 ACQMDTCYVYVAGGFD--GQTTTKESERLDLRSKMWQALPD 544


>sp|P34569|KEL10_CAEEL Kelch repeat-containing protein kel-10
           OS=Caenorhabditis elegans GN=kel-10 PE=2 SV=3
          Length = 566

 Score = 36.6 bits (83), Expect = 0.058
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +2

Query: 350 AVDMNGGYLYVAGGYGQRGDDYMEGAGRLDIKTKMWEALPD 472
           A  M+   +YVAGG+   G    + + RLD+++KMW+ALPD
Sbjct: 493 ACQMDTCSIYVAGGFD--GQATTKESERLDLRSKMWQALPD 531


>sp|O80502|FBK47_ARATH F-box/Kelch-repeat protein At2g44630
           OS=Arabidopsis thaliana GN=At2g44630 PE=2 SV=1
          Length = 372

 Score = 32.7 bits (73), Expect = 0.84
 Identities = 23/82 (28%), Positives = 38/82 (46%)
 Frame = +2

Query: 224 ETQLQLMQGVYSFDGLSMKWEDAXXXXXXXXXXXXXKQTSAIAVDMNGGYLYVAGGYGQR 403
           +T++  + G Y+F   S+ W                 +  +  V + GG +YV GG   R
Sbjct: 134 DTEIYCIPG-YNFPSSSIVWIFDTQSGQWRQGPSMQVERLSATVGLVGGKIYVIGG--NR 190

Query: 404 GDDYMEGAGRLDIKTKMWEALP 469
           G++ +  A   D+KT+ WEA P
Sbjct: 191 GEEIL--AEVFDLKTQTWEAAP 210


>sp|P06726|PP71_HCMVA 71 kDa phosphoprotein OS=Human cytomegalovirus
           (strain AD169) GN=UL82 PE=1 SV=2
          Length = 559

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 320 LMWWVEMSTMRPPTSYSSHQS-YTHLASAEAAFHPWPYPVRLKSRPYSLQYP 168
           +M ++   +  PPTS   H S YTH A   A  +P+P+  RL    + L  P
Sbjct: 237 IMLFLHHDSPHPPTSVFLHFSVYTHRAEVVARHNPYPHLRRLPDNGFQLLIP 288


>sp|Q3E8Y7|FK114_ARATH Putative F-box/Kelch-repeat protein At5g28160
           OS=Arabidopsis thaliana GN=At5g28160 PE=4 SV=1
          Length = 324

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +2

Query: 335 QTSAIAVDMNGGYLYVAGGYGQRGDDYMEGAGRLDIKTKMWEALPD 472
           +  A AV  NG  +YV GG     D+ +      DIKT+ WEALPD
Sbjct: 159 RAKASAVVFNGK-IYVMGGC--MADESVNWGEVFDIKTQTWEALPD 201


>sp|P0C2F7|Y1947_ARATH Kelch repeat-containing protein At1g19470
           OS=Arabidopsis thaliana GN=At1g19470 PE=2 SV=1
          Length = 412

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +2

Query: 368 GYLYVAGGYGQRGDDYMEGAGRLDIKTKMWEALP 469
           G +YV GG+  R  D  E     D+KT++WE+LP
Sbjct: 202 GKIYVIGGFRMRKPD-AEWIEVFDLKTQIWESLP 234


>sp|Q3E8Y5|FK115_ARATH Putative F-box/Kelch-repeat protein At5g28180
           OS=Arabidopsis thaliana GN=At5g28180 PE=4 SV=1
          Length = 352

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +2

Query: 368 GYLYVAGGYGQRGDDYMEGAGRLDIKTKMWEALPD 472
           G LYV GG   R D+ +      D KT+ WEALPD
Sbjct: 196 GKLYVMGGC--RDDESVNWGEVFDPKTQTWEALPD 228


>sp|Q38J84|IL2RB_PANTR Interleukin-2 receptor subunit beta OS=Pan
           troglodytes GN=IL2RB PE=2 SV=1
          Length = 551

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -2

Query: 311 WVEMSTMRPPTSYSSHQSYTHLASAEAAFHPWPYPVRLKSRPYSL 177
           W+ + T+ P T Y        L      + PW  P+  +++P SL
Sbjct: 192 WICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPASL 236


>sp|O65704|FBK83_ARATH Putative F-box/Kelch-repeat protein At4g19330
           OS=Arabidopsis thaliana GN=At4g19330 PE=2 SV=1
          Length = 537

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = +2

Query: 368 GYLYVAGGYGQRGDDYMEGAGRLDIKTKMWEALPD 472
           G LYV GG     D+    A   D KT+ WEALPD
Sbjct: 337 GKLYVMGGC--EADESTHWAEVFDPKTQTWEALPD 369


>sp|O82378|FBK37_ARATH Putative F-box/Kelch-repeat protein At2g29780
           OS=Arabidopsis thaliana GN=At2g29780 PE=2 SV=1
          Length = 398

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +2

Query: 344 AIAVDMNGGYLYVAGGYGQRGDDYMEGAGRLDIKTKMWEALPD 472
           A+A  +NG  +YV GG  +R DD++E     D+ T +W  +PD
Sbjct: 188 AVAEVINGK-IYVIGGCEKRYDDWIE---VFDVVTGIWSTVPD 226
tr_hit_id Q9VV22
Definition tr|Q9VV22|Q9VV22_DROME CG4982 OS=Drosophila melanogaster
Align length 54
Score (bit) 36.6
E-value 0.64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953181|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_B13, 5'
         (474 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9VV22|Q9VV22_DROME CG4982 OS=Drosophila melanogaster GN=CG49...    37   0.64 
tr|B4QMB3|B4QMB3_DROSI GD14617 OS=Drosophila simulans GN=GD14617...    37   0.64 
tr|B3NI96|B3NI96_DROER GG15981 OS=Drosophila erecta GN=GG15981 P...    36   0.84 
tr|B4IU63|B4IU63_DROYA GE19547 OS=Drosophila yakuba GN=GE19547 P...    35   1.4  
tr|B6L3K7|B6L3K7_BRAFL Putative uncharacterized protein OS=Branc...    35   1.4  
tr|A7Z3K8|A7Z3K8_BACA2 Putative uncharacterized protein OS=Bacil...    35   2.4  
tr|A7RHG1|A7RHG1_NEMVE Predicted protein OS=Nematostella vectens...    34   3.2  
tr|A8HZB2|A8HZB2_CHLRE Predicted protein OS=Chlamydomonas reinha...    34   4.2  
tr|B6N927|B6N927_BRAFL Putative uncharacterized protein OS=Branc...    33   5.4  
tr|A5DIE6|A5DIE6_PICGU Putative uncharacterized protein OS=Pichi...    33   5.4  
tr|Q29EL2|Q29EL2_DROPS GA18572 OS=Drosophila pseudoobscura pseud...    33   7.1  
tr|B4H259|B4H259_DROPE GL17847 OS=Drosophila persimilis GN=GL178...    33   7.1  
tr|B6ACV4|B6ACV4_9CRYT Putative uncharacterized protein OS=Crypt...    33   7.1  
tr|B0UBF7|B0UBF7_METS4 Lipolytic protein G-D-S-L family OS=Methy...    33   9.3  
tr|B1BVZ3|B1BVZ3_CLOPE ATP-dependent DNA helicase, UvrD/REP fami...    33   9.3  
tr|A3SU40|A3SU40_9RHOB Putative uncharacterized protein OS=Sulfi...    33   9.3  
tr|A3S978|A3S978_9RHOB Putative uncharacterized protein OS=Sulfi...    33   9.3  
tr|B7QH27|B7QH27_IXOSC Kelch domain-containing protein, putative...    33   9.3  
tr|B4HJK6|B4HJK6_DROSE GM25619 OS=Drosophila sechellia GN=GM2561...    33   9.3  
tr|A8XHJ2|A8XHJ2_CAEBR CBR-KEL-10 protein OS=Caenorhabditis brig...    33   9.3  
tr|B0CRA0|B0CRA0_LACBS Predicted protein OS=Laccaria bicolor (st...    33   9.3  

>tr|Q9VV22|Q9VV22_DROME CG4982 OS=Drosophila melanogaster GN=CG4982
           PE=2 SV=1
          Length = 113

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 21/54 (38%), Positives = 26/54 (48%)
 Frame = +1

Query: 13  GMASFCHPQGFSIQTKQVSVHHSRPYWVPEVHHTRTLSVSSTHASLFSFLCDGY 174
           G  S+  P   S Q+  V VH  RPYW P V HT  L  +   A+  S+   GY
Sbjct: 37  GYESYALPAAVSHQSSTV-VHEKRPYWRPIVDHTPILKAAYAPATSISYAPLGY 89


>tr|B4QMB3|B4QMB3_DROSI GD14617 OS=Drosophila simulans GN=GD14617
           PE=4 SV=1
          Length = 113

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 21/54 (38%), Positives = 26/54 (48%)
 Frame = +1

Query: 13  GMASFCHPQGFSIQTKQVSVHHSRPYWVPEVHHTRTLSVSSTHASLFSFLCDGY 174
           G  S+  P   S Q+  V VH  RPYW P V HT  L  +   A+  S+   GY
Sbjct: 37  GYESYALPAAVSHQSSTV-VHEKRPYWRPIVDHTPILKTAYAPATSISYAPLGY 89


>tr|B3NI96|B3NI96_DROER GG15981 OS=Drosophila erecta GN=GG15981 PE=4
           SV=1
          Length = 113

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +1

Query: 13  GMASFCHPQGFSIQTKQVSVHHSRPYWVPEVHHTRTLSVSSTHASLFSFLCDGY 174
           G  SF  P   S Q+  V VH  RPYW P V HT  L  +    +  S+   GY
Sbjct: 37  GYESFALPAAVSHQSSTV-VHEKRPYWRPIVDHTPILKAAYAPTTSISYAPLGY 89


>tr|B4IU63|B4IU63_DROYA GE19547 OS=Drosophila yakuba GN=GE19547 PE=4
           SV=1
          Length = 113

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 13  GMASFCHPQGFSIQTKQVSVHHSRPYWVPEVHHTRTLSVSSTHASLFSFLCDGY 174
           G  S+  P   S Q+  V VH  RPYW P V HT  L  +    +  S+   GY
Sbjct: 37  GYESYALPAAVSHQSSTV-VHEKRPYWRPVVDHTPILKAAYAPTTSISYAPLGY 89


>tr|B6L3K7|B6L3K7_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_202259 PE=4 SV=1
          Length = 574

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 341 SAIAVDMNGGYLYVAGGYGQRGDDYMEGAGRLDIKTKMWEAL 466
           S++ V ++GGY+Y  GGY   G+ Y+    R   +T  WE +
Sbjct: 380 SSLTVTVHGGYIYALGGY--NGERYLSTVERYSPRTNSWEEM 419


>tr|A7Z3K8|A7Z3K8_BACA2 Putative uncharacterized protein OS=Bacillus
           amyloliquefaciens (strain FZB42) GN=RBAM_012210 PE=4
           SV=1
          Length = 396

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 24/73 (32%), Positives = 30/73 (41%)
 Frame = +2

Query: 254 YSFDGLSMKWEDAXXXXXXXXXXXXXKQTSAIAVDMNGGYLYVAGGYGQRGDDYMEGAGR 433
           YSFD +S KW                +  S  AV   G Y+YV GGY  +G +       
Sbjct: 45  YSFDTISQKWTQGLDIPTP-------RVGSCTAVI--GNYIYVLGGY--KGANVYSSVDV 93

Query: 434 LDIKTKMWEALPD 472
            D KT  W + PD
Sbjct: 94  YDTKTNTWGSAPD 106


>tr|A7RHG1|A7RHG1_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g231809 PE=4 SV=1
          Length = 299

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +2

Query: 251 VYSFDGLSMKWEDAXXXXXXXXXXXXXKQTSAIAVDMNGGYLYVAGGYGQRGDDYMEGAG 430
           V  FD LS  WE +             + + A  +D +GG L V+GG+       ++   
Sbjct: 76  VMLFDWLSQSWEKSTPLTTA-------RASPASVMDKSGGRLLVSGGFNNVA---LKSTE 125

Query: 431 RLDIKTKMWEALPD 472
             D++T+ W +LPD
Sbjct: 126 AFDMQTEKWVSLPD 139


>tr|A8HZB2|A8HZB2_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_187604 PE=4 SV=1
          Length = 452

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
 Frame = -2

Query: 380 HTDSPHSCPRQWRLSASRLGLMWWV------EMSTMRPPTSYSSHQSYTHLASAEAA 228
           H  + H+ P+ W  S       W+       E S   PP +YSSH    H ASA+AA
Sbjct: 13  HAQAQHALPQGWEASYDEHHQAWYYYNRSTGETSWTPPPAAYSSH----HTASAQAA 65


>tr|B6N927|B6N927_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_92247 PE=4 SV=1
          Length = 1485

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 15/56 (26%)
 Frame = -2

Query: 410  HLHAGHSRLPHTDSPHSCPR-------------QWRLSASRLGLMWW--VEMSTMR 288
            H HA HS  PH   PH  PR             Q  L    L L WW  VE S++R
Sbjct: 1360 HAHADHSSSPHHRCPHGRPRMPGRLSRILHMHLQLNLQPEHLCLRWWLPVERSSIR 1415


>tr|A5DIE6|A5DIE6_PICGU Putative uncharacterized protein OS=Pichia
           guilliermondii GN=PGUG_03047 PE=4 SV=2
          Length = 565

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 27/118 (22%)
 Frame = +2

Query: 17  WPVFVTRRDFP---------------YKQSRSLFTIVDPIGCLRCIIPVPCQF------- 130
           WP+F+   D P               +K S+SL  +VDP+  L       C+F       
Sbjct: 290 WPIFLMAADLPLPKQIVIHSHWLCDGFKMSKSLGNVVDPLDTLDYYGQDACRFFLSEYSN 349

Query: 131 ----PQHMHRYFHFSVMGTVGSKV-LISVVLDTAKDETQLQLMQGVYSFDGLSMKWED 289
                 +  R FHF+    +G    L++     + D  +   M    SFD +   WED
Sbjct: 350 IESDSNYSEREFHFTRENLIGKYANLVTRCGGPSFDIEESVAMSKEGSFDKIESFWED 407