DK953222
Clone id TST39A01NGRL0017_D07
Library
Length 440
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_D07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAGCAGGAAGTAGACCCTGCTCTTGCTCCCCACAGCTCTTCATAAAGAACTGCGCACCCT
TGTTTGGGATTCCTGCTGAGCTCAAACCTCTAATGAAAGTGGAGGGAGAAGTATCTTTGC
ACGTGGGTTGTCATTTGTGGTCGACACAGATGTGTATAGAATTGAGGACCTGCGTGAAAA
TTTTTGTGTAAGTATGTGCATGCGCTTGTCTTAAGGAAGTCTGTCCACTCACAATGGATC
ACACACTACAGGATATGTCTTTTCACCTACCATTTTTGTTGAGATCTTTGCTCCAAAGAT
GAAAGAGAATTCTTTAATTTTGCCCACATGTATGAGTCTAAAGGATATCTGTATGTGACT
GCGAACTTTGTAAAAGTAAGAAAAGGAATCTGCAATGTTAAGAAAGGAAAAAATCAAAAA
AAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q24JP5
Definition sp|Q24JP5|T132A_HUMAN Transmembrane protein 132A OS=Homo sapiens
Align length 53
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953222|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_D07, 5'
(407 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q24JP5|T132A_HUMAN Transmembrane protein 132A OS=Homo sapiens... 32 1.3
sp|P10914|IRF1_HUMAN Interferon regulatory factor 1 OS=Homo sapi... 31 1.7
sp|P42681|TXK_HUMAN Tyrosine-protein kinase TXK OS=Homo sapiens ... 30 3.7
sp|Q80WF4|T132A_RAT Transmembrane protein 132A OS=Rattus norvegi... 29 6.3
sp|Q922P8|T132A_MOUSE Transmembrane protein 132A OS=Mus musculus... 29 6.3

>sp|Q24JP5|T132A_HUMAN Transmembrane protein 132A OS=Homo sapiens
GN=TMEM132A PE=2 SV=1
Length = 1023

Score = 31.6 bits (70), Expect = 1.3
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +3

Query: 48 NCAPLFGIPAELKP-LMKVEG-----EVSLHVGCHLWSTQMCIELRTCVKIFV 188
N APL G+P + L+ V+G EV+ HVGC +TQ+ C +FV
Sbjct: 410 NTAPLTGVPQHVPVRLVTVDGGGALVEVTEHVGCESANTQVLQVSEACDAVFV 462


>sp|P10914|IRF1_HUMAN Interferon regulatory factor 1 OS=Homo sapiens
GN=IRF1 PE=1 SV=2
Length = 325

Score = 31.2 bits (69), Expect = 1.7
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = -2

Query: 124 TCKDTSPSTFIRGLSSAGIPNKGAQF----FMKSCGEQEQGLLPA 2
+C D+SP TF GLSS+ +P+ + + +M+ E EQ L PA
Sbjct: 139 SCGDSSPDTFSDGLSSSTLPDDHSSYTVPGYMQDL-EVEQALTPA 182


>sp|P42681|TXK_HUMAN Tyrosine-protein kinase TXK OS=Homo sapiens
GN=TXK PE=1 SV=3
Length = 527

Score = 30.0 bits (66), Expect = 3.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3

Query: 363 RSHIQISFRLIHVGKIKEFSFIFGAKISTKMVGEK 259
RSHIQ++ + I+ G + E FI AK+ K+ K
Sbjct: 291 RSHIQVAIKAINEGSMSEEDFIEEAKVMMKLSHSK 325


>sp|Q80WF4|T132A_RAT Transmembrane protein 132A OS=Rattus norvegicus
GN=Tmem132a PE=1 SV=1
Length = 1021

Score = 29.3 bits (64), Expect = 6.3
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Frame = +3

Query: 48 NCAPLFGIPAELKP-LMKVEG-----EVSLHVGCHLWSTQMCIELRTCVKIFV 188
N APL G+P + L+ V+ EV+ H+GC +TQ+ C +FV
Sbjct: 406 NTAPLTGVPQRIPVRLVTVDSGGALEEVTEHIGCESANTQVLQVSEACDAVFV 458


>sp|Q922P8|T132A_MOUSE Transmembrane protein 132A OS=Mus musculus
GN=Tmem132a PE=2 SV=2
Length = 1018

Score = 29.3 bits (64), Expect = 6.3
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Frame = +3

Query: 48 NCAPLFGIPAELKP-LMKVEG-----EVSLHVGCHLWSTQMCIELRTCVKIFV 188
N APL G+P + L+ V+ EV+ H+GC +TQ+ C +FV
Sbjct: 406 NTAPLTGVPQRIPVRLVTVDSGGALEEVTEHIGCESANTQVLQVSEACDAVFV 458


tr_hit_id B7NZL0
Definition tr|B7NZL0|B7NZL0_RABIT Interferon regulatory factor 1 (Predicted) OS=Oryctolagus cuniculus
Align length 45
Score (bit) 33.1
E-value 7.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953222|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_D07, 5'
(407 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7NZL0|B7NZL0_RABIT Interferon regulatory factor 1 (Predicted... 33 7.2
tr|Q5FGL2|Q5FGL2_EHRRG Putative uncharacterized protein OS=Ehrli... 33 9.4
tr|A8J9A4|A8J9A4_CHLRE Predicted protein OS=Chlamydomonas reinha... 33 9.4
tr|Q8PYX6|Q8PYX6_METMA Nitrogenase molybdenum-iron protein beta ... 33 9.4

>tr|B7NZL0|B7NZL0_RABIT Interferon regulatory factor 1 (Predicted)
OS=Oryctolagus cuniculus GN=IRF1 PE=4 SV=1
Length = 320

Score = 33.1 bits (74), Expect = 7.2
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -2

Query: 124 TCKDTSPSTFIRGLSSAGIPNK----GAQFFMKSCGEQEQGLLPA 2
+C D+SP TF GLSS+ +P+ AQ ++ E EQ L PA
Sbjct: 139 SCGDSSPDTFSDGLSSSTLPDDHSGYTAQGYIGQDSEVEQALTPA 183


>tr|Q5FGL2|Q5FGL2_EHRRG Putative uncharacterized protein
OS=Ehrlichia ruminantium (strain Gardel)
GN=ERGA_CDS_08740 PE=4 SV=1
Length = 621

Score = 32.7 bits (73), Expect = 9.4
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3

Query: 369 KVRSHIQISFRLIHVGKIKEFSFIFGAK 286
K+ SH+ IS LI + I +FSFIFG +
Sbjct: 329 KITSHVSISVTLIKLNLISQFSFIFGVQ 356


>tr|A8J9A4|A8J9A4_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_177061 PE=4 SV=1
Length = 1866

Score = 32.7 bits (73), Expect = 9.4
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1

Query: 89 RFELSRNPKQGCAVLYEELWGARAGSTS 6
R E P +GC VLY++L GA +GST+
Sbjct: 400 RLEALARPSRGCLVLYDDLDGASSGSTT 427


>tr|Q8PYX6|Q8PYX6_METMA Nitrogenase molybdenum-iron protein beta
chain (NifK) OS=Methanosarcina mazei GN=nifK PE=3 SV=1
Length = 456

Score = 32.7 bits (73), Expect = 9.4
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2

Query: 161 IEDLRENFCVSMCMRLS*GSLSTHNGSHTTGYVFSPTIFVEIFAPKMKEN 310
IED+R + +++ S ++ G+H TGY FV IFA K K N
Sbjct: 119 IEDVRAEELIDPSIKICAASTPSYVGTHITGYDNMVKSFVTIFARKTKPN 168