DK953295 |
Clone id |
TST39A01NGRL0017_G09 |
Library |
TST39 |
Length |
493 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_G09. 5' end sequence. |
Accession |
DK953295 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL30Contig1 |
Sequence |
CAGGAAGGAGGGCAAAACTGTGAGAGTTGTCTCAATGGTATCATGGGAGTTGTTTGAAGA ACAAAGTGCTGAATACAAAGAGAGTGTTATCCCTGCAGCCGTGACTTCCAGAGTGAGTGT CGAAGCTGGTTCTACATTCGGTTGGGAGAAGTATGTAGGCTCCAAAGGCAAAGCAATAGG CATTGACCACTTTGGTGCCAGTGCACCTGCTGGTACCATCTACAAAAAGTTTGGTTTGAC TGTGGACAATGTGGTTGCCAATGCCAAGGAGGTGATGTAAATATACTTTTGTATTTACTC TGCAGTTTTGTAGTAATAACCTAATTGATTTGAGATGTTCTGATTGGGATGGATTTTAGT CCAATGGATGGTTGCCCATATGCTGGATTGTGGCACAAATGGCCGCAAGTTTTTGTATTT TTTCTGCTGGGCTTGGAGGTGTAACAAAGGTCCAATCATTTTGCTTTCTAATTAAGGAGT GAAGCTGTTTCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SIC9 |
Definition |
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays |
Align length |
89 |
Score (bit) |
149.0 |
E-value |
7.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953295|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_G09, 5' (493 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 149 7e-36 sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=... 145 1e-34 sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 143 4e-34 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 140 3e-33 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 136 5e-32 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 136 6e-32 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 122 1e-27 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 108 1e-23 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 108 1e-23 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 108 1e-23 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 108 1e-23 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 108 1e-23 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 108 1e-23 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 107 2e-23 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 107 2e-23 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 105 1e-22 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 105 1e-22 sp|Q9KLW7|TKT2_VIBCH Transketolase 2 OS=Vibrio cholerae GN=tkt2 ... 104 3e-22 sp|Q9KUP2|TKT1_VIBCH Transketolase 1 OS=Vibrio cholerae GN=tkt1 ... 104 3e-22 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 103 3e-22 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 103 3e-22 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 102 1e-21 sp|P27302|TKT1_ECOLI Transketolase 1 OS=Escherichia coli (strain... 100 4e-21 sp|Q7MDD4|TKT2_VIBVY Transketolase 2 OS=Vibrio vulnificus (strai... 100 5e-21 sp|Q87GY4|TKT2_VIBPA Transketolase 2 OS=Vibrio parahaemolyticus ... 99 8e-21 sp|Q5DZP0|TKT2_VIBF1 Transketolase 2 OS=Vibrio fischeri (strain ... 99 8e-21 sp|Q7MHK7|TKT1_VIBVY Transketolase 1 OS=Vibrio vulnificus (strai... 98 2e-20 sp|Q87LK8|TKT1_VIBPA Transketolase 1 OS=Vibrio parahaemolyticus ... 98 2e-20 sp|Q5E7R1|TKT1_VIBF1 Transketolase 1 OS=Vibrio fischeri (strain ... 98 2e-20 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 98 2e-20
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 149 bits (376), Expect = 7e-36 Identities = 69/89 (77%), Positives = 84/89 (94%) Frame = +2
Query: 2 RKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAIG 181 RKEGKTVRVVS VSWELF+EQS EYKESV+PAAVT+R+S+EAGST GW+KYVG++GKAIG Sbjct: 585 RKEGKTVRVVSFVSWELFDEQSDEYKESVLPAAVTARISIEAGSTLGWQKYVGAQGKAIG 644
Query: 182 IDHFGASAPAGTIYKKFGLTVDNVVANAK 268 ID FGASAPAGTIYK++G+TV++++A AK Sbjct: 645 IDKFGASAPAGTIYKEYGITVESIIAAAK 673
>sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1 Length = 519
Score = 145 bits (366), Expect = 1e-34 Identities = 71/92 (77%), Positives = 83/92 (90%) Frame = +2
Query: 2 RKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAIG 181 RKEGK VRVVS VSWELF+EQS EYKESV+P++VT+RVS+EAGSTFGW K VGSKGKAIG Sbjct: 428 RKEGKGVRVVSFVSWELFDEQSKEYKESVLPSSVTARVSIEAGSTFGWGKIVGSKGKAIG 487
Query: 182 IDHFGASAPAGTIYKKFGLTVDNVVANAKEVM 277 ID FGASAPAG IY++FG+TV+ VVA AKE++ Sbjct: 488 IDRFGASAPAGKIYEEFGITVEAVVAAAKELI 519
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 143 bits (361), Expect = 4e-34 Identities = 68/91 (74%), Positives = 82/91 (90%) Frame = +2
Query: 2 RKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAIG 181 +KEGKTVRVVS V WEL++EQSAEYKESV+P++VT+RVS+EAGSTFGW+K+VG KGKAIG Sbjct: 650 KKEGKTVRVVSFVCWELYDEQSAEYKESVLPSSVTARVSIEAGSTFGWQKFVGDKGKAIG 709
Query: 182 IDHFGASAPAGTIYKKFGLTVDNVVANAKEV 274 ID FGASAPA IYK+FG+T + VVA AK+V Sbjct: 710 IDGFGASAPADKIYKEFGITAEAVVAAAKQV 740
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 140 bits (353), Expect = 3e-33 Identities = 69/91 (75%), Positives = 79/91 (86%) Frame = +2
Query: 2 RKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAIG 181 RKEGK VRVVS VSWELFE+QS EYKESV+P+ VT+RVS+EAGSTFGW K VGSKGKAIG Sbjct: 650 RKEGKAVRVVSFVSWELFEKQSDEYKESVLPSDVTARVSIEAGSTFGWHKIVGSKGKAIG 709
Query: 182 IDHFGASAPAGTIYKKFGLTVDNVVANAKEV 274 ID FGASAPAG IY+++G+TV+ VV AK V Sbjct: 710 IDKFGASAPAGKIYQEYGITVEAVVEAAKSV 740
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 136 bits (343), Expect = 5e-32 Identities = 63/91 (69%), Positives = 80/91 (87%) Frame = +2
Query: 2 RKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAIG 181 RKEGK VRVVS+V WELF EQS +Y+E+V+P+ VT+RVSVEAGSTFGWE+++G KGKA+G Sbjct: 585 RKEGKKVRVVSLVCWELFAEQSEKYRETVLPSGVTARVSVEAGSTFGWERFIGPKGKAVG 644
Query: 182 IDHFGASAPAGTIYKKFGLTVDNVVANAKEV 274 ID FGASAPA ++K+FG+TV+ VVA AKE+ Sbjct: 645 IDRFGASAPAERLFKEFGITVEAVVAAAKEI 675
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 136 bits (342), Expect = 6e-32 Identities = 66/91 (72%), Positives = 79/91 (86%) Frame = +2
Query: 2 RKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAIG 181 RKEGK VRVVS+VSWELF EQS EYKE V+P+ VT+RVSVEAGSTFGWE++VG KG+A+G Sbjct: 588 RKEGKKVRVVSLVSWELFGEQSKEYKEMVLPSEVTARVSVEAGSTFGWERFVGLKGRAVG 647
Query: 182 IDHFGASAPAGTIYKKFGLTVDNVVANAKEV 274 ID FGASA A +YK+FG+TV+ VVA AKE+ Sbjct: 648 IDRFGASASAERLYKEFGITVEAVVAAAKEL 678
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 122 bits (305), Expect = 1e-27 Identities = 55/92 (59%), Positives = 73/92 (79%) Frame = +2
Query: 2 RKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAIG 181 + EGK VRVVS+ +W+LF+ Q A YKESV+P AVT R++VEA S+FGW KY+GS+G A+ Sbjct: 578 KAEGKKVRVVSLAAWDLFDAQDAAYKESVLPKAVTKRLAVEAASSFGWHKYIGSEGDAVT 637
Query: 182 IDHFGASAPAGTIYKKFGLTVDNVVANAKEVM 277 ID FGASAP G +KFG +VDNV+A AK+++ Sbjct: 638 IDRFGASAPGGVCLEKFGFSVDNVLAKAKQLL 669
>sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (strain MW2) GN=tkt PE=3 SV=1 Length = 662
Score = 108 bits (270), Expect = 1e-23 Identities = 49/84 (58%), Positives = 64/84 (76%) Frame = +2
Query: 5 KEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAIGI 184 K+GK+VRVVSM +W FE+QS EYKESVIP++VT RV++E S GW KYVG+ GK I I Sbjct: 573 KQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAI 632
Query: 185 DHFGASAPAGTIYKKFGLTVDNVV 256 D FGASAP + +K+G T +N++ Sbjct: 633 DGFGASAPGDLVVEKYGFTKENIL 656
>sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (strain MSSA476) GN=tkt PE=3 SV=1 Length = 662
Score = 108 bits (270), Expect = 1e-23 Identities = 49/84 (58%), Positives = 64/84 (76%) Frame = +2
Query: 5 KEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAIGI 184 K+GK+VRVVSM +W FE+QS EYKESVIP++VT RV++E S GW KYVG+ GK I I Sbjct: 573 KQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAI 632
Query: 185 DHFGASAPAGTIYKKFGLTVDNVV 256 D FGASAP + +K+G T +N++ Sbjct: 633 DGFGASAPGDLVVEKYGFTKENIL 656
>sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (strain MRSA252) GN=tkt PE=3 SV=1 Length = 662
Score = 108 bits (270), Expect = 1e-23 Identities = 49/84 (58%), Positives = 64/84 (76%) Frame = +2
Query: 5 KEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAIGI 184 K+GK+VRVVSM +W FE+QS EYKESVIP++VT RV++E S GW KYVG+ GK I I Sbjct: 573 KQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAI 632
Query: 185 DHFGASAPAGTIYKKFGLTVDNVV 256 D FGASAP + +K+G T +N++ Sbjct: 633 DGFGASAPGDLVVEKYGFTKENIL 656
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SF03 |
Definition |
tr|A9SF03|A9SF03_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
92 |
Score (bit) |
153.0 |
E-value |
4.0e-36 |
Report |
|