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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953297
Clone id TST39A01NGRL0017_G11
Library
Length 663
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_G11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCCCCTTGCCCTTCCTCCTCTGCGTAACATTTTGTGAAGCGAGGGACGATCTGCCGTGA
AAGGGAGGTCGCCATGGCCGTCGTGGCATCGAAAGCTCTGTTGTCGTCCTCTCTCTCAAC
AACTACCGCTCCAGCGACTACCTCGCCCGACTGTTCCCGCCAGCAATTCTTGGGCGGGAG
GGCTCTCCGAGCAGCGGGCCCCTCTTCTTCCTCCAAGCGCGCGTCCTCCTTCACCGTTCG
CGCAACCGCCGATAAGCCCGTGAAGGTTGACAGGCAGTTATGGTTTGCCTCCAAGCAAAG
TCTAAGCTATCTAGATGGCAGCCTTCCTGGTGACTTTGGGTTTGATCCCTTGGGTTTGAT
GGACCCAGAGGGGCCTGGAGGCTTCATTGAACCTGATTGGTTGAGGTATGGAGAAATCAT
CAATGGAAGATATGCAATGTTGGGTGCCGTTGGAGCTATTGCGCCAGAGATCCTTGGCAA
GGCTGGTCTCATCCCTCAAGAAACCGCTGTCGTATGGTTTAGGACTGGAGTGATCCCACC
TCTAGGAACCTACAACTACTGGGCAGATCCCTACACGCTATTCGTCCTTGAGATGGCCCT
CATGGGCTTTGCTGAGCACCGAAGAGCACAGGATTATTATAAGCCTGGATCGATGGGGAA
AGC
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 146
Score (bit) 252.0
E-value 1.0e-66
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953297|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_G11, 5'
         (663 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   252   1e-66
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   250   5e-66
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   107   7e-23
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   104   5e-22
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    88   5e-17
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    86   1e-16
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    81   6e-15
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    69   2e-11
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    67   1e-10
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    65   2e-10
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    65   4e-10
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    65   4e-10
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    64   5e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    64   7e-10
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    62   2e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    62   2e-09
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    62   3e-09
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    62   4e-09
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    61   5e-09
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    61   6e-09
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...    61   6e-09
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    60   8e-09
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    60   8e-09
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    60   1e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    60   1e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    60   1e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    59   2e-08
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...    59   2e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   2e-08
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    59   2e-08

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  252 bits (643), Expect = 1e-66
 Identities = 121/146 (82%), Positives = 128/146 (87%), Gaps = 2/146 (1%)
 Frame = +2

Query: 230 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 403
           F VRA +  PVK   +RQLWFASKQSLSYLDG LPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 404 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 583
            YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 97  AYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 156

Query: 584 VLEMALMGFAEHRRAQDYYKPGSMGK 661
           VLEMALMGFAEHRR QD+ KPGSMGK
Sbjct: 157 VLEMALMGFAEHRRFQDWAKPGSMGK 182


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  250 bits (638), Expect = 5e-66
 Identities = 121/145 (83%), Positives = 127/145 (87%), Gaps = 3/145 (2%)
 Frame = +2

Query: 236 VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 406
           VRA A  PVK   VDR LWFASKQSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL 
Sbjct: 40  VRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLA 99

Query: 407 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 586
           YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ WF+TGVIPP GTYNYWAD YTLFV
Sbjct: 100 YGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFV 159

Query: 587 LEMALMGFAEHRRAQDYYKPGSMGK 661
           LEMALMGFAEHRR QD+ KPGSMGK
Sbjct: 160 LEMALMGFAEHRRFQDWAKPGSMGK 184


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  107 bits (266), Expect = 7e-23
 Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
 Frame = +2

Query: 155 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 334
           ++  FLGGR LR +            TV   AD     DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGD 85

Query: 335 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 511
           FGFDPLGL  DPE         W +  E+++ R+AMLGA G   PE+L K G++   +  
Sbjct: 86  FGFDPLGLASDPE------SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS-- 137

Query: 512 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 649
            W+        G   Y+ D  TLF++E+ L+G+AE RR  D  KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPG 176



 Score = 33.9 bits (76), Expect = 0.79
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +2

Query: 302 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 457
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  104 bits (259), Expect = 5e-22
 Identities = 67/166 (40%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
 Frame = +2

Query: 155 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 334
           ++  FLGG+ LR +             V A A  P   DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGKRLRVS-KFIAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGD 85

Query: 335 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 511
           FGFDPLGL  DPE         W    E+++ R+AMLGA G   PE L K G++   +  
Sbjct: 86  FGFDPLGLGSDPE------SLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS-- 137

Query: 512 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 649
            W+        G   Y+ D  TLFV+E+ L+G+AE RR  D  KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPG 176



 Score = 33.9 bits (76), Expect = 0.79
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +2

Query: 302 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 457
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 87.8 bits (216), Expect = 5e-17
 Identities = 59/169 (34%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
 Frame = +2

Query: 158 RQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDF 337
           + +FLGG    ++G               +A   V+  +  W     S  YL GSLPGD 
Sbjct: 19  KSRFLGG----SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDN 74

Query: 338 GFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 514
           GFDPLGL  DPE    F++       E++NGR+AMLG  G + PE+    G+I       
Sbjct: 75  GFDPLGLAEDPENLRWFVQ------AELVNGRWAMLGVAGMLLPEVFTSIGII---NVPK 125

Query: 515 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 661
           W+        G   Y+A   TLFV+E  L  + E RR QD   PGS+ +
Sbjct: 126 WYAA------GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQ 168


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 86.3 bits (212), Expect = 1e-16
 Identities = 54/140 (38%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
 Frame = +2

Query: 245 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEII 421
           T+   V+  +  W     S  YL GSL GD GFDPLGL  DPE    F++       E++
Sbjct: 45  TSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQ------AELV 98

Query: 422 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 601
           NGR+AMLG  G + PE+  K G+I       W+        G   Y+A   TLFV+E  L
Sbjct: 99  NGRWAMLGVAGMLLPEVFTKIGII---NVPEWY------DAGKEQYFASSSTLFVIEFIL 149

Query: 602 MGFAEHRRAQDYYKPGSMGK 661
             + E RR QD   PGS+ +
Sbjct: 150 FHYVEIRRWQDIKNPGSVNQ 169


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 80.9 bits (198), Expect = 6e-15
 Identities = 54/128 (42%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
 Frame = +2

Query: 281 WFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 457
           W    QS +YLDGSL GD GFDPL L  DPE    F++ D      ++NGR+AMLG  G 
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQAD------VVNGRWAMLGVAGM 89

Query: 458 IAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDY 637
           + PE+L KAGL+    A  W R   +P  G   Y+A   T   + M+   + E RR QD 
Sbjct: 90  LIPEVLTKAGLM---NAPEWLR---LP--GKETYFASSSTALRVHMS-STYVEIRRWQDI 140

Query: 638 YKPGSMGK 661
             PGS+ +
Sbjct: 141 KNPGSVNQ 148


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
 Frame = +2

Query: 308 YLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKA 484
           +LDGSLPGDFGFDPLGL  DP     F++  W R  E+I+GR+AML  +G      +G+A
Sbjct: 75  WLDGSLPGDFGFDPLGLGKDP----AFLK--WYREAELIHGRWAMLAVLGI----FVGQA 124

Query: 485 GLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGS 652
                 T + WF  G  P  +  +++     TL   ++ LMG+ E +R  D++ P S
Sbjct: 125 W-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDPDS 172


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
 Frame = +2

Query: 230 FTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLR 406
           FTV A A K   +       +     +LDGSLPGD+GFDPLGL  DP     F++  W R
Sbjct: 44  FTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDP----AFLK--WYR 97

Query: 407 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLF 583
             E+I+GR+AM   +G      +G+A      + + WF  G  P  +  +++     TL 
Sbjct: 98  EAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----TLL 144

Query: 584 VLEMALMGFAEHRRAQDYYKPGS 652
             ++ LMG+ E +R  D++ P S
Sbjct: 145 GTQLILMGWVESKRWVDFFDPDS 167


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 45/121 (37%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
 Frame = +2

Query: 281 WFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRY--GEIINGRYAMLGAVG 454
           W   +   SYLDGS PGDFGFD LGL       G +  +  RY   E+I+ R+AML   G
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGL-------GEVPANLERYKESELIHCRWAMLAVPG 101

Query: 455 AIAPEILGKAGLI-PQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQ 631
            I PE LG    +  QE A +    G    LG    W    T+  +E   + F EH+R+ 
Sbjct: 102 IIVPEALGLGNWVKAQEWAAI--PGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSM 159

Query: 632 D 634
           +
Sbjct: 160 E 160
tr_hit_id Q02071
Definition tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein OS=Pinus sylvestris
Align length 171
Score (bit) 263.0
E-value 7.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953297|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_G11, 5'
         (663 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein...   263   7e-69
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea...   257   5e-67
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul...   256   1e-66
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul...   255   1e-66
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ...   253   7e-66
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ...   252   1e-65
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome...   249   1e-64
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   248   3e-64
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot...   245   2e-63
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot...   245   2e-63
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot...   242   2e-62
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs...   241   4e-62
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza...   241   4e-62
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit...   238   2e-61
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten...   238   2e-61
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit...   238   2e-61
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot...   238   3e-61
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit...   237   4e-61
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar...   209   2e-52
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ...   206   1e-51
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-...   204   3e-51
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-...   204   3e-51
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c...   192   2e-47
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr...   191   5e-47
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ...   191   5e-47
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr...   188   2e-46
tr|Q3B9U5|Q3B9U5_OSTTA Chloroplast light-harvesting complex I pr...   188   3e-46
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ...   186   9e-46
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ...   186   9e-46
tr|A4QPK1|A4QPK1_ACEAT Chloroplast light-harvesting complex I pr...   185   2e-45

>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
          Length = 286

 Score =  263 bits (672), Expect = 7e-69
 Identities = 132/171 (77%), Positives = 142/171 (83%), Gaps = 3/171 (1%)
 Frame = +2

Query: 158 RQQFLGGRALRAAGPXXXXXXXXXFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLP 328
           +Q  LGG+AL              FTVR  A+++KPVK  DRQLWFAS QSLSYLDGSLP
Sbjct: 25  QQLLLGGKALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLP 84

Query: 329 GDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETA 508
           GD+GFDPLGLMDPEGPGGF+EP WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA
Sbjct: 85  GDYGFDPLGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETA 144

Query: 509 VVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 661
           + WF+TGVIPP GTYNYWADP+TLFVLEMALMGFAEHRR QDY  PGSMGK
Sbjct: 145 LPWFQTGVIPPAGTYNYWADPFTLFVLEMALMGFAEHRRLQDYRNPGSMGK 195


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 289

 Score =  257 bits (656), Expect = 5e-67
 Identities = 126/147 (85%), Positives = 132/147 (89%), Gaps = 3/147 (2%)
 Frame = +2

Query: 230 FTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDW 400
           F VR  A++ KPVK  DRQLWFASKQSLSYLDGSLPGD+GFDPLGLMDPEGPGGFIEP W
Sbjct: 51  FAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGFDPLGLMDPEGPGGFIEPGW 110

Query: 401 LRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTL 580
           L YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WFRTGVIPP GTY+YWADP+TL
Sbjct: 111 LAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGVIPPAGTYDYWADPFTL 170

Query: 581 FVLEMALMGFAEHRRAQDYYKPGSMGK 661
           FVLEMALMGFAEHRR QDY  PGSM K
Sbjct: 171 FVLEMALMGFAEHRRLQDYRYPGSMSK 197


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  256 bits (653), Expect = 1e-66
 Identities = 124/145 (85%), Positives = 129/145 (88%), Gaps = 1/145 (0%)
 Frame = +2

Query: 230 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 406
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 407 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 586
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 587 LEMALMGFAEHRRAQDYYKPGSMGK 661
            EMALMGFAEHRR QD+ KPGSMGK
Sbjct: 159 FEMALMGFAEHRRLQDWAKPGSMGK 183


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 274

 Score =  255 bits (652), Expect = 1e-66
 Identities = 124/145 (85%), Positives = 129/145 (88%), Gaps = 1/145 (0%)
 Frame = +2

Query: 230 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 406
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 407 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 586
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 587 LEMALMGFAEHRRAQDYYKPGSMGK 661
            EMALMGFAEHRR QD+ KPGSMGK
Sbjct: 159 FEMALMGFAEHRRFQDWAKPGSMGK 183


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  253 bits (646), Expect = 7e-66
 Identities = 126/170 (74%), Positives = 135/170 (79%), Gaps = 3/170 (1%)
 Frame = +2

Query: 161 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 331
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 332 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 511
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 512 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 661
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGK
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGK 184


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  252 bits (644), Expect = 1e-65
 Identities = 126/170 (74%), Positives = 135/170 (79%), Gaps = 3/170 (1%)
 Frame = +2

Query: 161 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 331
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 332 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 511
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 512 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 661
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGK
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGK 184


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
           PE=4 SV=1
          Length = 274

 Score =  249 bits (636), Expect = 1e-64
 Identities = 123/169 (72%), Positives = 133/169 (78%), Gaps = 2/169 (1%)
 Frame = +2

Query: 161 QQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGD 334
           +Q LG R L++            F VRA +  PVK   DR LWFASKQSL+YLDGSLPGD
Sbjct: 19  RQILGSRPLQSPS-----RKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGD 73

Query: 335 FGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 514
           +GFDPLGL DPEG GGFIEP WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+ 
Sbjct: 74  YGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALP 133

Query: 515 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 661
           WF+TGV PP GTYNYWADPYTLFV EMALMGFAEHRR QD+  PGSMGK
Sbjct: 134 WFKTGVFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGK 182


>tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea
           mays PE=2 SV=1
          Length = 267

 Score =  248 bits (632), Expect = 3e-64
 Identities = 116/146 (79%), Positives = 125/146 (85%), Gaps = 2/146 (1%)
 Frame = +2

Query: 230 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 403
           F VRA++  P K   DRQLWFASKQSLSYLDG+LPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 31  FVVRASSSPPAKQGADRQLWFASKQSLSYLDGTLPGDYGFDPLGLSDPEGTGGFIEPKWL 90

Query: 404 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 583
            YGE+INGRYAMLGAVGAIAPEI GK G+IP ETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 91  AYGEVINGRYAMLGAVGAIAPEIFGKMGIIPPETALPWFKTGVIPPAGTYNYWADSYTLF 150

Query: 584 VLEMALMGFAEHRRAQDYYKPGSMGK 661
           V  MALMGFAEHRR QD+Y PGSMGK
Sbjct: 151 VFNMALMGFAEHRRLQDWYNPGSMGK 176


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
          Length = 273

 Score =  245 bits (625), Expect = 2e-63
 Identities = 118/146 (80%), Positives = 125/146 (85%), Gaps = 2/146 (1%)
 Frame = +2

Query: 230 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 403
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 404 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 583
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 584 VLEMALMGFAEHRRAQDYYKPGSMGK 661
           VLEMALMGFAEHRR QD+Y PGSMGK
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGK 182


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
          Length = 273

 Score =  245 bits (625), Expect = 2e-63
 Identities = 118/146 (80%), Positives = 125/146 (85%), Gaps = 2/146 (1%)
 Frame = +2

Query: 230 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 403
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 404 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 583
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 584 VLEMALMGFAEHRRAQDYYKPGSMGK 661
           VLEMALMGFAEHRR QD+Y PGSMGK
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGK 182