DK953314
Clone id TST39A01NGRL0017_H04
Library
Length 531
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_H04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTTGCCGCAAGAACGACGATCTGCGCATTATTTGTACTTGAAGTGACAATCGCCCACTTT
CCCTCGCTCTTACAAGAATTGGGTTCTTGCCCAGTTTCATTCTCTAGCTGCATGGAGGGC
TGGATTCACACGTACAGAGTGCGGTTTCCGTCAGCATTTCTTCTGAAGGCTTGAGCACAT
TTGGGTTCCCATCTCTGTCGAATTTGGATAATTTTTGTGATCTCGGACTCACATGGTCGT
TCTTTAGCTGCTCTAAGCCAGGACCTTCAAGCTCAGCTTCATTATACTTTTGGGCCTACT
TCACTAATGAGAGCTGGTCTTTAATTGAAAGACATAAGCTTGCTTTTGCTTCAGGCAAAA
GTTCTCAATGAACTGGTCACTTTCCATCACGAGAAGGGAGGACTGGTGGTCTTCGGGTGG
CACCAATGGCTGGGCCACTTGTATTGTCATGGGTTTTCTGTTTGGGCTTTATGCTATGCG
TTCCTTGATGTGGGCATTCCTAAAACGTTATTTGGGGGAGGAGCTCGTCCA
■■Homology search results ■■ -
sp_hit_id Q92610
Definition sp|Q92610|ZN592_HUMAN Zinc finger protein 592 OS=Homo sapiens
Align length 94
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953314|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_H04, 5'
(531 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q92610|ZN592_HUMAN Zinc finger protein 592 OS=Homo sapiens GN... 32 1.4
sp|Q08A71|ANM6_ARATH Probable protein arginine N-methyltransfera... 30 5.5
sp|O66932|PHSG_AQUAE Glycogen phosphorylase OS=Aquifex aeolicus ... 30 7.2
sp|Q8N3L3|TXLNB_HUMAN Beta-taxilin OS=Homo sapiens GN=TXLNB PE=1... 30 9.4
sp|P05179|CP2C7_RAT Cytochrome P450 2C7 OS=Rattus norvegicus GN=... 30 9.5

>sp|Q92610|ZN592_HUMAN Zinc finger protein 592 OS=Homo sapiens
GN=ZNF592 PE=1 SV=2
Length = 1267

Score = 32.3 bits (72), Expect = 1.4
Identities = 25/94 (26%), Positives = 40/94 (42%)
Frame = -3

Query: 400 LPSRDGK*PVH*ELLPEAKASLCLSIKDQLSLVK*AQKYNEAELEGPGLEQLKNDHVSPR 221
+P R P H +L A + L K S+ K Q + +L GP E K P+
Sbjct: 268 VPPRQRLKPAHSKLSSCVAALVALQAKRVASVTKEDQPGHTKDLSGPTKESSKGSPKMPK 327

Query: 220 SQKLSKFDRDGNPNVLKPSEEMLTETALCTCESS 119
S K + + +KPS+ + ++C+ SS
Sbjct: 328 SPKSPRSPLEATRKSIKPSD---SPRSICSDSSS 358


>sp|Q08A71|ANM6_ARATH Probable protein arginine N-methyltransferase
6 OS=Arabidopsis thaliana GN=PRMT6 PE=2 SV=1
Length = 435

Score = 30.4 bits (67), Expect = 5.5
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -3

Query: 286 YNEAELE---GPGLEQLKNDHVSPRSQKLSKFDRDGNPNVLKPSEEMLTETALCTCESSP 116
+ E ELE GP L RS ++ R G NVL+ S+++ +L T ESSP
Sbjct: 16 HRELELEDKQGPSLSSF--GRAKKRSHAGARDPRGGLANVLRVSDQLGEHKSLETSESSP 73

Query: 115 P 113
P
Sbjct: 74 P 74


>sp|O66932|PHSG_AQUAE Glycogen phosphorylase OS=Aquifex aeolicus
GN=glgP PE=3 SV=1
Length = 692

Score = 30.0 bits (66), Expect = 7.2
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2

Query: 338 ACFCFRQKFSMNWSLSITRREDWWSSG--GTNGWA 436
AC K SMN L ++ + WW G G NGWA
Sbjct: 579 ACGTSGMKASMNGVLHLSILDGWWIEGYNGKNGWA 613


>sp|Q8N3L3|TXLNB_HUMAN Beta-taxilin OS=Homo sapiens GN=TXLNB PE=1
SV=3
Length = 684

Score = 29.6 bits (65), Expect = 9.4
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = -3

Query: 493 PHQGTHSIKPKQKTHDNTSGPAIGATRRPPVLPSRDGK*PVH*ELLPEAKA 341
PHQ + +P+ + ++ A+ +PP++PSRD + P+ L P+A+A
Sbjct: 517 PHQSKET-QPEIGSSQESADAALKEPEQPPLIPSRDSESPLP-PLTPQAEA 565


>sp|P05179|CP2C7_RAT Cytochrome P450 2C7 OS=Rattus norvegicus
GN=Cyp2c7 PE=1 SV=2
Length = 490

Score = 29.6 bits (65), Expect = 9.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1

Query: 414 EDHQSSLLVMESDQFIENFCLKQKQAYVFQLKTSSH 307
E+HQ SL V F++ + +KQKQA + SH
Sbjct: 249 EEHQESLDVTNPRDFVDYYLIKQKQANNIEQSEYSH 284


tr_hit_id A9V6S8
Definition tr|A9V6S8|A9V6S8_MONBE Predicted protein OS=Monosiga brevicollis
Align length 33
Score (bit) 33.9
E-value 5.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953314|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_H04, 5'
(531 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9V6S8|A9V6S8_MONBE Predicted protein OS=Monosiga brevicollis... 34 5.3
tr|B0UG83|B0UG83_METS4 Putative uncharacterized protein OS=Methy... 33 9.2

>tr|A9V6S8|A9V6S8_MONBE Predicted protein OS=Monosiga brevicollis
GN=33646 PE=4 SV=1
Length = 1552

Score = 33.9 bits (76), Expect = 5.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3

Query: 484 GTHSIKPKQKTHDNTSGPAIGATRRPPVLPSRD 386
G S+ P++ T DNT+ P + + RPP LP+ D
Sbjct: 1042 GPASLPPRRGTVDNTAPPPVPVSNRPPPLPTSD 1074


>tr|B0UG83|B0UG83_METS4 Putative uncharacterized protein
OS=Methylobacterium sp. (strain 4-46) GN=M446_4998 PE=3
SV=1
Length = 300

Score = 33.1 bits (74), Expect = 9.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1

Query: 397 GGLVVFGWHQWLGHLYCHGFSVWALCYAFLDVGI 498
GGL+ FGW W GHL G W + Y F +G+
Sbjct: 47 GGLIGFGWTLWRGHLSALGLIKWPV-YVFGALGL 79