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NBDC - LSDB Archive
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DK953327
Clone id TST39A01NGRL0017_H17
Library
Length 561
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_H17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AATTAGCATCCCAAGTCGCAACAGCACATATTGCACTCTTCCCCGCAAGCGTTTCTCTCT
GCAAGGAGTGTCGCAATGGCAGCTGCCACAGTGCTCTCTTCCTCATTTGTGGGGCAAGCC
TCTCTTCTGCGGGAGAGCAATGAGCTGTCCAGCAGGGTAACGGCAGGCGAGGCCCGCGTG
CAGATGAGGTCCTCGAAGAAGTCGGCACCCTCGGGTAGCATCTGGTATGGCGCCGACCGC
CCTCTCTACTTGGGCCCTTTTTCAGGCTCTCCCCCATCCTACCTGACGGGTGAGTTCCCC
GGTGACTACGGCTGGGACACCGCCGGACTGTCCGCCGACCCTGAAACGTTCGCCAAGAAC
CGAGAACTAGAGGTTATCCACGCCAGATGGGCCATGCTGGGCGCCCTGGGCTGCGTCACC
CCTGAGCTGCTGGCCAAGAACGGCGTCAAGTTCGGCGAGGCTGTCTGGTTCAAGGCCGGC
TCTCAGATCTTCGCCGACGGCGGCCTGGACTACCTAGGCAACCCCAGCCTGGTGCACGCG
CAAAGCATCCTCGCCATCTGG
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 163
Score (bit) 267.0
E-value 3.0e-71
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953327|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_H17, 5'
         (561 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   267   3e-71
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   244   2e-64
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   242   1e-63
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   241   1e-63
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   241   2e-63
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   241   2e-63
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   240   4e-63
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   240   4e-63
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   240   4e-63
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...   239   5e-63
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...   238   1e-62
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...   238   1e-62
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   238   2e-62
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   238   2e-62
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   237   3e-62
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   237   3e-62
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   236   6e-62
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   236   8e-62
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   236   8e-62
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   236   8e-62
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   236   8e-62
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   235   1e-61
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   235   1e-61
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   235   1e-61
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   235   1e-61
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   235   1e-61
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   234   2e-61
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   234   2e-61
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   233   4e-61
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   233   4e-61

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  267 bits (682), Expect = 3e-71
 Identities = 133/163 (81%), Positives = 141/163 (86%), Gaps = 1/163 (0%)
 Frame = +1

Query: 76  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYL 252
           MA +T  L+S+F GQ             V AGEARVQM + K  APSGSIWYG+DRPLYL
Sbjct: 1   MATSTAALTSTFSGQQLKPVNELSRK--VGAGEARVQMMAPKSKAPSGSIWYGSDRPLYL 58

Query: 253 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 432
           GPFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELL
Sbjct: 59  GPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 118

Query: 433 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           AKNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIW
Sbjct: 119 AKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIW 161


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  244 bits (624), Expect = 2e-64
 Identities = 119/162 (73%), Positives = 129/162 (79%)
 Frame = +1

Query: 76  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 255
           MA   +  S+FVGQA               GE R+ MR + KSAP  SIWYG DRP YLG
Sbjct: 1   MATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQ-SIWYGEDRPKYLG 59

Query: 256 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 435
           PFS   PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+
Sbjct: 60  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILS 119

Query: 436 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           KNGVKFGEAVWFKAGSQIF++GGLDYLGNP+LVHAQSILAIW
Sbjct: 120 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIW 161


>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R
           PE=2 SV=2
          Length = 265

 Score =  242 bits (617), Expect = 1e-63
 Identities = 124/167 (74%), Positives = 135/167 (80%), Gaps = 5/167 (2%)
 Frame = +1

Query: 76  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS----KKSAPSGSIWYGADR 240
           MAAAT+ LSS  + +A               GEAR+ MR +    K +A SGS WYGADR
Sbjct: 1   MAAATMALSSPVMARAAPSTSSALF------GEARITMRKTAAKPKPAASSGSPWYGADR 54

Query: 241 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 420
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV 
Sbjct: 55  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 114

Query: 421 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIW
Sbjct: 115 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIW 161


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  241 bits (616), Expect = 1e-63
 Identities = 117/162 (72%), Positives = 128/162 (79%)
 Frame = +1

Query: 76  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 255
           MA + +  S+F GQ                G  RV MR + KSAP+ SIWYG DRP YLG
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPT-SIWYGPDRPKYLG 59

Query: 256 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 435
           PFS   PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+
Sbjct: 60  PFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILS 119

Query: 436 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           KNGVKFGEAVWFKAGSQIF++GGLDYLGNP+L+HAQSILAIW
Sbjct: 120 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIW 161


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  241 bits (615), Expect = 2e-63
 Identities = 124/165 (75%), Positives = 131/165 (79%), Gaps = 3/165 (1%)
 Frame = +1

Query: 76  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPL 246
           MAAAT+   S SF GQA              +G  R+ MR +  KSAPS S WYG DR  
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEI----SGNGRITMRKAVAKSAPSSSPWYGPDRVK 56

Query: 247 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 426
           YLGPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 57  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 116

Query: 427 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           LLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIW
Sbjct: 117 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 161


>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R
           PE=2 SV=2
          Length = 261

 Score =  241 bits (614), Expect = 2e-63
 Identities = 115/135 (85%), Positives = 121/135 (89%), Gaps = 3/135 (2%)
 Frame = +1

Query: 166 GEARVQMRSSK---KSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 336
           GE R+ MR S    K A SGS WYGADR LYLGP SG PPSYLTGEFPGDYGWDTAGLSA
Sbjct: 23  GEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 82

Query: 337 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYL 516
           DPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYL
Sbjct: 83  DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 142

Query: 517 GNPSLVHAQSILAIW 561
           GNPSL+HAQSILAIW
Sbjct: 143 GNPSLIHAQSILAIW 157


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  240 bits (612), Expect = 4e-63
 Identities = 115/136 (84%), Positives = 122/136 (89%), Gaps = 4/136 (2%)
 Frame = +1

Query: 166 GEARVQMRSS----KKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 333
           GEARV MR +    K +A SGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26  GEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 334 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 513
           ADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 514 LGNPSLVHAQSILAIW 561
           LGNPSL+HAQSILAIW
Sbjct: 146 LGNPSLIHAQSILAIW 161


>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic
           OS=Zea mays PE=2 SV=1
          Length = 265

 Score =  240 bits (612), Expect = 4e-63
 Identities = 123/168 (73%), Positives = 134/168 (79%), Gaps = 6/168 (3%)
 Frame = +1

Query: 76  MAAATVLSSS--FVGQAXXXXXXXXXXXXVTAGEARVQMRSS----KKSAPSGSIWYGAD 237
           MA++T+  SS  F G+A             + GEARV MR +    K +A SGS WYG D
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSS-------SFGEARVTMRKTAAKAKPAAASGSPWYGPD 53

Query: 238 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCV 417
           R LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 54  RVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 113

Query: 418 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
            PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIW
Sbjct: 114 FPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIW 161


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  240 bits (612), Expect = 4e-63
 Identities = 121/162 (74%), Positives = 127/162 (78%)
 Frame = +1

Query: 76  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 255
           MA +T+  S+F GQ             V     RV MR + KSAP  SIWYG DRP YLG
Sbjct: 1   MATSTIQQSAFAGQTLLKPQNELVRK-VGGNGGRVSMRRTIKSAPE-SIWYGPDRPKYLG 58

Query: 256 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 435
           PFS   PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA
Sbjct: 59  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118

Query: 436 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           KNGVKFGEAVWFKAGSQIF +GGLDYLGNP+LVHAQSILAIW
Sbjct: 119 KNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIW 160


>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1,
           chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1
          Length = 266

 Score =  239 bits (611), Expect = 5e-63
 Identities = 122/165 (73%), Positives = 132/165 (80%), Gaps = 3/165 (1%)
 Frame = +1

Query: 76  MAAATVLSSS--FVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPL 246
           MAA+T+  SS  F G+A               G  RV MR + K + PSGS WYG+DR  
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPGASEVF----GTGRVTMRKTVKPTGPSGSPWYGSDRVK 56

Query: 247 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 426
           YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE
Sbjct: 57  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPE 116

Query: 427 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           LLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIW
Sbjct: 117 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 161
tr_hit_id Q5CCK8
Definition tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum capillus-veneris
Align length 169
Score (bit) 251.0
E-value 2.0e-65
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953327|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_H17, 5'
         (561 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   251   2e-65
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   244   2e-63
tr|Q40247|Q40247_LACSA Light-harvesting chlorophyll a/b-binding ...   244   2e-63
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   243   5e-63
tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T...   243   7e-63
tr|B3G0G4|B3G0G4_9ASPA Chloroplast chlorophyll a/b-binding prote...   242   9e-63
tr|Q0J2G2|Q0J2G2_ORYSJ Os09g0346500 protein OS=Oryza sativa subs...   242   1e-62
tr|B8BEP6|B8BEP6_ORYSI Putative uncharacterized protein OS=Oryza...   242   1e-62
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   242   1e-62
tr|Q39142|Q39142_ARATH Photosystem II type I chlorophyll a /b bi...   241   2e-62
tr|Q32291|Q32291_GOSHI Chlorophyll A/B binding protein OS=Gossyp...   241   2e-62
tr|A9PJK6|A9PJK6_POPJC Putative uncharacterized protein OS=Popul...   241   2e-62
tr|A9PHD4|A9PHD4_POPTR Putative uncharacterized protein OS=Popul...   241   2e-62
tr|A9PEI5|A9PEI5_POPTR Putative uncharacterized protein OS=Popul...   241   2e-62
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   241   2e-62
tr|Q8W0E6|Q8W0E6_ORYSJ cDNA clone:001-013-E06, full insert seque...   241   2e-62
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   241   2e-62
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   241   2e-62
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   241   2e-62
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   241   2e-62
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   241   2e-62
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   241   2e-62
tr|A2WUJ5|A2WUJ5_ORYSI Putative uncharacterized protein OS=Oryza...   241   2e-62
tr|Q84U94|Q84U94_CITLI Chlorophyll a/b-binding protein (Fragment...   241   3e-62
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   241   3e-62
tr|Q0JLH1|Q0JLH1_ORYSJ cDNA clone:001-037-B06, full insert seque...   241   3e-62
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   241   3e-62
tr|A2WS81|A2WS81_ORYSI Putative uncharacterized protein OS=Oryza...   241   3e-62
tr|Q39141|Q39141_ARATH Photosystem II type I chlorophyll a /b bi...   240   3e-62
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   240   3e-62

>tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum
           capillus-veneris GN=AcCab1 PE=4 SV=1
          Length = 215

 Score =  251 bits (641), Expect = 2e-65
 Identities = 127/169 (75%), Positives = 137/169 (81%)
 Frame = +1

Query: 55  LSARSVAMAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGA 234
           ++A +  +++     SS V               V   EARVQM + KKS+ SG+I YGA
Sbjct: 1   MAATTTFLSSVVAFLSSSVFSGQQLKPVNELSRKVGTSEARVQMMAPKKSS-SGNIRYGA 59

Query: 235 DRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGC 414
           DR LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC
Sbjct: 60  DRLLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 119

Query: 415 VTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           VTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW
Sbjct: 120 VTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 168


>tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphorbia
           esula PE=2 SV=1
          Length = 268

 Score =  244 bits (623), Expect = 2e-63
 Identities = 122/165 (73%), Positives = 132/165 (80%), Gaps = 2/165 (1%)
 Frame = +1

Query: 73  AMAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR--SSKKSAPSGSIWYGADRPL 246
           A ++  + S SF GQA               G  RV MR  ++KK APSGS WYG DR  
Sbjct: 3   ASSSMALSSPSFAGQAVKLSPSSASELM---GNGRVSMRKAATKKVAPSGSPWYGPDRVK 59

Query: 247 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 426
           YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE
Sbjct: 60  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 119

Query: 427 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           LLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIW
Sbjct: 120 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIW 164


>tr|Q40247|Q40247_LACSA Light-harvesting chlorophyll a/b-binding
           protein (LHCP) OS=Lactuca sativa GN=cab PE=2 SV=1
          Length = 266

 Score =  244 bits (623), Expect = 2e-63
 Identities = 125/166 (75%), Positives = 134/166 (80%), Gaps = 4/166 (2%)
 Frame = +1

Query: 76  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR---SSKKSAPSGSIWYGADRP 243
           MAA+T+ LSS F GQA               G  RV MR   ++KK+APSGS WYG DR 
Sbjct: 1   MAASTMALSSPFAGQAVKTSPSSSELF----GNGRVSMRKTAAAKKAAPSGSPWYGPDRV 56

Query: 244 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTP 423
            YLGPFSG  PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV P
Sbjct: 57  KYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFP 116

Query: 424 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           ELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIW
Sbjct: 117 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 162


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  243 bits (620), Expect = 5e-63
 Identities = 122/163 (74%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
 Frame = +1

Query: 76  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR-SSKKSAPSGSIWYGADRPLYL 252
           MAAAT + S+ +               V   EARV MR S+ KSA S SIWYGADRP YL
Sbjct: 1   MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYL 60

Query: 253 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 432
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 433 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIW
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIW 163


>tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB
           OS=Triticum aestivum GN=Wcab PE=2 SV=1
          Length = 266

 Score =  243 bits (619), Expect = 7e-63
 Identities = 125/167 (74%), Positives = 133/167 (79%), Gaps = 5/167 (2%)
 Frame = +1

Query: 76  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSK---KSAPSGSIWYGADR 240
           MAAAT+   SS+F G+A               GEARV MR +    K   SGS WYGADR
Sbjct: 1   MAAATMSLSSSTFAGKAVKNVPSL-----ALLGEARVTMRKTAAKAKQVSSGSPWYGADR 55

Query: 241 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 420
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV 
Sbjct: 56  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVF 115

Query: 421 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIW
Sbjct: 116 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 162


>tr|B3G0G4|B3G0G4_9ASPA Chloroplast chlorophyll a/b-binding protein
           OS=Ophiopogon japonicus PE=2 SV=1
          Length = 264

 Score =  242 bits (618), Expect = 9e-63
 Identities = 122/163 (74%), Positives = 129/163 (79%), Gaps = 1/163 (0%)
 Frame = +1

Query: 76  MAAATVLSS-SFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYL 252
           MAA  VLSS S  G+A               G  R+ MR + KS  SGS WYG DR  YL
Sbjct: 1   MAATMVLSSPSLAGKAVKLAPSPASELM---GNGRISMRKTGKSVSSGSPWYGPDRVKYL 57

Query: 253 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 432
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 58  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117

Query: 433 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           A+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIW
Sbjct: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIW 160


>tr|Q0J2G2|Q0J2G2_ORYSJ Os09g0346500 protein OS=Oryza sativa subsp.
           japonica GN=Os09g0346500 PE=2 SV=1
          Length = 265

 Score =  242 bits (617), Expect = 1e-62
 Identities = 124/167 (74%), Positives = 135/167 (80%), Gaps = 5/167 (2%)
 Frame = +1

Query: 76  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS----KKSAPSGSIWYGADR 240
           MAAAT+ LSS  + +A               GEAR+ MR +    K +A SGS WYGADR
Sbjct: 1   MAAATMALSSPVMARAAPSTSSALF------GEARITMRKTAAKPKPAASSGSPWYGADR 54

Query: 241 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 420
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV 
Sbjct: 55  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 114

Query: 421 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIW
Sbjct: 115 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIW 161


>tr|B8BEP6|B8BEP6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_30987 PE=4 SV=1
          Length = 265

 Score =  242 bits (617), Expect = 1e-62
 Identities = 124/167 (74%), Positives = 135/167 (80%), Gaps = 5/167 (2%)
 Frame = +1

Query: 76  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS----KKSAPSGSIWYGADR 240
           MAAAT+ LSS  + +A               GEAR+ MR +    K +A SGS WYGADR
Sbjct: 1   MAAATMALSSPVMARAAPSTSSALF------GEARITMRKTAAKPKPAASSGSPWYGADR 54

Query: 241 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 420
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV 
Sbjct: 55  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 114

Query: 421 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIW
Sbjct: 115 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIW 161


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  242 bits (617), Expect = 1e-62
 Identities = 120/162 (74%), Positives = 132/162 (81%)
 Frame = +1

Query: 76  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 255
           MAAAT + S+ +               V + EARV MR + KS  S SIWYGADRP YLG
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGSSEARVTMRRTVKST-SDSIWYGADRPKYLG 59

Query: 256 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 435
           PFSG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLA
Sbjct: 60  PFSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLA 119

Query: 436 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 561
           K+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIW
Sbjct: 120 KSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIW 161


>tr|Q39142|Q39142_ARATH Photosystem II type I chlorophyll a /b
           binding protein (Putative photosystem II type I
           chlorophyll a b binding protein) OS=Arabidopsis thaliana
           GN=Lhb1B1 PE=2 SV=1
          Length = 266

 Score =  241 bits (616), Expect = 2e-62
 Identities = 114/133 (85%), Positives = 122/133 (91%), Gaps = 1/133 (0%)
 Frame = +1

Query: 166 GEARVQMR-SSKKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADP 342
           G  R+ MR +SK + PSGS WYG+DR  YLGPFSG PPSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29  GTGRITMRKASKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 88

Query: 343 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGN 522
           ETFA+NRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+DGGLDYLGN
Sbjct: 89  ETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGN 148

Query: 523 PSLVHAQSILAIW 561
           PSLVHAQSILAIW
Sbjct: 149 PSLVHAQSILAIW 161