DK953349 |
Clone id |
TST39A01NGRL0017_I15 |
Library |
TST39 |
Length |
588 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_I15. 5' end sequence. |
Accession |
DK953349 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL64Contig1 |
Sequence |
GGCTAGTCTGCGTTTTCCTGCGATCGTAGCTCGCCGGGTCAAGCAGCAGCCATGGTGCTT TCTCAAAAGGAAGCCGATATCCAAATGATGCTTGCTGCCGATGTGCACCTCGGCACGAAG AATTGCGATTTTCAGATGGAGCGTTACGTGTGGAAGCGTCGATCTGACGGAATTTTTATC ATCAATGTAGGAAAAACATGGGACAAGCTGGAGTTGGCAGCGAGAGTGATTGTCGCTATT GAAAATCCTCAGGATATTATTGTTCAATCTGCCAGGCCCTATGGTCAGAGGGCAGTATTA AAAGTCGCTCAATACACTGGTGCTCAGGCGATTGCTGGACGTCACACTCCAGGAACGTTT ACCAATCAGCTTCAGAACACGTTTTGTGAGCCTCGGCTCTTGATTTTGACAGACCCACGT ACTGATCATCAGCCTATCAAAGAGGCTGCGCTTGGAAACATCCCTATTATTGCATTTTGT GACACAGATTCCCCCATGCGCCATGTGGACATTGGTATCCCTGCTAATAACAAGGGGAAG CACAGTATCGGTTGTCTTTTTTGGATGCTAGCTCGCATGGTTCTCCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O22518 |
Definition |
sp|O22518|RSSA_SOYBN 40S ribosomal protein SA OS=Glycine max |
Align length |
177 |
Score (bit) |
335.0 |
E-value |
8.0e-92 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P0C9 |
Definition |
tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
177 |
Score (bit) |
338.0 |
E-value |
1.0e-91 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953349|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_I15, 5' (588 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea... 338 1e-91 tr|A9NV56|A9NV56_PICSI Putative uncharacterized protein OS=Picea... 338 2e-91 tr|Q8H3I3|Q8H3I3_ORYSJ Os07g0616600 protein OS=Oryza sativa subs... 335 1e-90 tr|A2YNQ0|A2YNQ0_ORYSI Putative uncharacterized protein OS=Oryza... 335 1e-90 tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 335 1e-90 tr|A2XHR6|A2XHR6_ORYSI Putative uncharacterized protein OS=Oryza... 334 3e-90 tr|B7FID3|B7FID3_MEDTR Putative uncharacterized protein OS=Medic... 333 4e-90 tr|B6T782|B6T782_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 331 2e-89 tr|B6SSF3|B6SSF3_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 331 2e-89 tr|B4FZ84|B4FZ84_MAIZE Putative uncharacterized protein OS=Zea m... 331 2e-89 tr|Q94HF0|Q94HF0_ORYSA Putative 40S Ribosomal protein OS=Oryza s... 330 3e-89 tr|Q10QU9|Q10QU9_ORYSJ cDNA clone:001-007-D06, full insert seque... 330 3e-89 tr|Q10QU8|Q10QU8_ORYSJ 40S ribosomal protein SA, putative, expre... 330 3e-89 tr|B4FSQ4|B4FSQ4_MAIZE Putative uncharacterized protein OS=Zea m... 330 3e-89 tr|A2XD89|A2XD89_ORYSI Putative uncharacterized protein OS=Oryza... 330 3e-89 tr|B4FTD2|B4FTD2_MAIZE Putative uncharacterized protein OS=Zea m... 330 4e-89 tr|A9S9Z5|A9S9Z5_PHYPA Predicted protein (Fragment) OS=Physcomit... 330 5e-89 tr|A9TDH1|A9TDH1_PHYPA Predicted protein OS=Physcomitrella paten... 329 6e-89 tr|A9S4V0|A9S4V0_PHYPA Predicted protein OS=Physcomitrella paten... 329 6e-89 tr|B6T6X2|B6T6X2_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 329 8e-89 tr|A9P801|A9P801_POPTR Putative uncharacterized protein OS=Popul... 329 8e-89 tr|A7P6D1|A7P6D1_VITVI Chromosome chr9 scaffold_7, whole genome ... 329 8e-89 tr|A5BUU4|A5BUU4_VITVI Putative uncharacterized protein OS=Vitis... 329 8e-89 tr|B6TIC4|B6TIC4_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 328 1e-88 tr|A9T6E0|A9T6E0_PHYPA Predicted protein (Fragment) OS=Physcomit... 327 2e-88 tr|A9P891|A9P891_POPTR Putative uncharacterized protein OS=Popul... 327 2e-88 tr|Q2V4D3|Q2V4D3_ARATH Uncharacterized protein At1g72370.2 OS=Ar... 327 3e-88 tr|A9P906|A9P906_POPTR Putative uncharacterized protein OS=Popul... 327 4e-88 tr|A9PC77|A9PC77_POPTR Putative uncharacterized protein OS=Popul... 324 2e-87 tr|Q308A0|Q308A0_SOLTU P40-like protein OS=Solanum tuberosum PE=... 323 6e-87
>tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 338 bits (867), Expect = 1e-91 Identities = 164/177 (92%), Positives = 172/177 (97%) Frame = +1
Query: 58 LSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVA 237 LSQKEADIQMMLAADVHLGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+KL+LAARVIVA Sbjct: 8 LSQKEADIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67
Query: 238 IENPQDIIVQSARPYGQRAVLKVAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDP 417 IENPQDIIVQSARPYGQRAVLK AQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDP Sbjct: 68 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127
Query: 418 RTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQ 588 RTDHQPI+EAALGNIP IAFCDTDSPM+HVDIGIPANNKGKHSIGCLFWMLARMVLQ Sbjct: 128 RTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQ 184
>tr|A9NV56|A9NV56_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 338 bits (866), Expect = 2e-91 Identities = 163/177 (92%), Positives = 172/177 (97%) Frame = +1
Query: 58 LSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVA 237 LSQKEAD+QMMLAADVHLGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+KL+LAARVIVA Sbjct: 8 LSQKEADVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67
Query: 238 IENPQDIIVQSARPYGQRAVLKVAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDP 417 IENPQDIIVQSARPYGQRAVLK AQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDP Sbjct: 68 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127
Query: 418 RTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQ 588 RTDHQPI+EAALGNIP IAFCDTDSPM+HVDIGIPANNKGKHSIGCLFWMLARMVLQ Sbjct: 128 RTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQ 184
>tr|Q8H3I3|Q8H3I3_ORYSJ Os07g0616600 protein OS=Oryza sativa subsp. japonica GN=B1056G08.113 PE=2 SV=2 Length = 305
Score = 335 bits (859), Expect = 1e-90 Identities = 163/187 (87%), Positives = 176/187 (94%) Frame = +1
Query: 28 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 207 ++ G AAA LSQ+E DIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IIN+GKTW+K Sbjct: 2 AAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 61
Query: 208 LELAARVIVAIENPQDIIVQSARPYGQRAVLKVAQYTGAQAIAGRHTPGTFTNQLQNTFC 387 L+LAARVIVAIENPQDIIVQSARPYGQRAVLK AQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 62 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121
Query: 388 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWM 567 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKGK SIGCLFW+ Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWL 181
Query: 568 LARMVLQ 588 LARMVLQ Sbjct: 182 LARMVLQ 188
>tr|A2YNQ0|A2YNQ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26872 PE=3 SV=1 Length = 305
Score = 335 bits (859), Expect = 1e-90 Identities = 163/187 (87%), Positives = 176/187 (94%) Frame = +1
Query: 28 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 207 ++ G AAA LSQ+E DIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IIN+GKTW+K Sbjct: 2 AAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 61
Query: 208 LELAARVIVAIENPQDIIVQSARPYGQRAVLKVAQYTGAQAIAGRHTPGTFTNQLQNTFC 387 L+LAARVIVAIENPQDIIVQSARPYGQRAVLK AQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 62 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121
Query: 388 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWM 567 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKGK SIGCLFW+ Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWL 181
Query: 568 LARMVLQ 588 LARMVLQ Sbjct: 182 LARMVLQ 188
>tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2 SV=1 Length = 308
Score = 335 bits (858), Expect = 1e-90 Identities = 163/187 (87%), Positives = 175/187 (93%) Frame = +1
Query: 28 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 207 +S G A LSQKE DIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IIN+GKTWDK Sbjct: 3 ASAGGGAVRALSQKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDK 62
Query: 208 LELAARVIVAIENPQDIIVQSARPYGQRAVLKVAQYTGAQAIAGRHTPGTFTNQLQNTFC 387 L+LAARVIVAIENPQDIIVQSARPYGQRAVLK AQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 63 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 122
Query: 388 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWM 567 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKG++SIGCLFW+ Sbjct: 123 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWL 182
Query: 568 LARMVLQ 588 LARMVLQ Sbjct: 183 LARMVLQ 189
>tr|A2XHR6|A2XHR6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11954 PE=3 SV=1 Length = 310
Score = 334 bits (856), Expect = 3e-90 Identities = 163/187 (87%), Positives = 174/187 (93%) Frame = +1
Query: 28 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 207 ++ G A LSQ+E DIQMMLAADVHLGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+K Sbjct: 4 AAAGGGAPRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEK 63
Query: 208 LELAARVIVAIENPQDIIVQSARPYGQRAVLKVAQYTGAQAIAGRHTPGTFTNQLQNTFC 387 L+LAARVIVAIENPQDIIVQSARPYGQRAVLK AQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 64 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 123
Query: 388 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWM 567 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKGK SIGCLFW+ Sbjct: 124 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWL 183
Query: 568 LARMVLQ 588 LARMVLQ Sbjct: 184 LARMVLQ 190
>tr|B7FID3|B7FID3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 299
Score = 333 bits (854), Expect = 4e-90 Identities = 162/183 (88%), Positives = 174/183 (95%) Frame = +1
Query: 40 QAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELA 219 Q ++ LSQKEADIQMMLAADVHLGTKNCDFQMERY +KRR+DGI+IIN+GKTW+KL+LA Sbjct: 5 QLSSRQLSQKEADIQMMLAADVHLGTKNCDFQMERYCFKRRNDGIYIINLGKTWEKLQLA 64
Query: 220 ARVIVAIENPQDIIVQSARPYGQRAVLKVAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRL 399 ARVIVAIENPQDIIVQSARPYGQRAVLK AQYTGA AIAGRHTPGTFTNQ+Q +F EPRL Sbjct: 65 ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQVSFSEPRL 124
Query: 400 LILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARM 579 LILTDPRTDHQPIKEAALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW+LARM Sbjct: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
Query: 580 VLQ 588 VLQ Sbjct: 185 VLQ 187
>tr|B6T782|B6T782_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2 SV=1 Length = 308
Score = 331 bits (849), Expect = 2e-89 Identities = 161/187 (86%), Positives = 174/187 (93%) Frame = +1
Query: 28 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 207 ++ G A LSQKE DIQMMLAADVHLGTKNCDFQ ERYV+KRRSDGI+IIN+GKTWDK Sbjct: 3 AAAGGGAVRALSQKEQDIQMMLAADVHLGTKNCDFQTERYVFKRRSDGIYIINLGKTWDK 62
Query: 208 LELAARVIVAIENPQDIIVQSARPYGQRAVLKVAQYTGAQAIAGRHTPGTFTNQLQNTFC 387 L+LAARVIVAIENPQDIIVQSARPYGQRAVLK AQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 63 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 122
Query: 388 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWM 567 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKG++SIGCLFW+ Sbjct: 123 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWL 182
Query: 568 LARMVLQ 588 L+RMVLQ Sbjct: 183 LSRMVLQ 189
>tr|B6SSF3|B6SSF3_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2 SV=1 Length = 307
Score = 331 bits (848), Expect = 2e-89 Identities = 160/187 (85%), Positives = 173/187 (92%) Frame = +1
Query: 28 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 207 ++P LSQ+E DIQMMLAADVHLGTKNCDFQ+ERYV+KRR+DGI+IIN+GKTWDK Sbjct: 3 AAPAGGGPRALSQREQDIQMMLAADVHLGTKNCDFQVERYVYKRRTDGIYIINLGKTWDK 62
Query: 208 LELAARVIVAIENPQDIIVQSARPYGQRAVLKVAQYTGAQAIAGRHTPGTFTNQLQNTFC 387 L+LAARVIVAIENPQDIIVQSARPYGQRAVLK AQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 63 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 122
Query: 388 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWM 567 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKGK SIGCLFW+ Sbjct: 123 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWL 182
Query: 568 LARMVLQ 588 LARMVLQ Sbjct: 183 LARMVLQ 189
>tr|B4FZ84|B4FZ84_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 307
Score = 331 bits (848), Expect = 2e-89 Identities = 160/187 (85%), Positives = 173/187 (92%) Frame = +1
Query: 28 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 207 ++P LSQ+E DIQMMLAADVHLGTKNCDFQ+ERYV+KRR+DGI+IIN+GKTWDK Sbjct: 3 AAPAGGGPRALSQREQDIQMMLAADVHLGTKNCDFQVERYVYKRRTDGIYIINLGKTWDK 62
Query: 208 LELAARVIVAIENPQDIIVQSARPYGQRAVLKVAQYTGAQAIAGRHTPGTFTNQLQNTFC 387 L+LAARVIVAIENPQDIIVQSARPYGQRAVLK AQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 63 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 122
Query: 388 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWM 567 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKGK SIGCLFW+ Sbjct: 123 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWL 182
Query: 568 LARMVLQ 588 LARMVLQ Sbjct: 183 LARMVLQ 189
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