DK953355
Clone id TST39A01NGRL0017_I21
Library
Length 443
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_I21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CGAGAGAGAGAGAGACGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATATCAGTAGGTAG
CAAGTAAGCAAGCACAAGCAGACTGTGCCGAACGTGATGGAGAAGATAGGCGAGATGCTG
CACATGGGGGGTCATCGCAAAGAAGAAGAGCACCCAGCTCACCCACCACCGCAATATGCA
GGAGACTATGATCCTGGCCATCACGGTGGTGGTGGCGAGCATCATGGTGGGGTGCCCCCC
CATGTGGCCGCGGCCTCCTATGATCAGCATGAGCACCCGGGACAGATGCATGCAGGACCA
CCCCCTGTTCATGCAGGTTACGGTGGGCTGGAGCAGCAGCAGCACCACCATGGTGGGGCT
CCACCTGCCCATGCCCATGAGCCGCCCCCACCCCACCATGAAGGCCCCATTGAGAAGATG
AAACACAAGATGAAGGGTGGCGA
■■Homology search results ■■ -
sp_hit_id Q9XJ56
Definition sp|Q9XJ56|ECP44_DAUCA Phosphoprotein ECPP44 OS=Daucus carota
Align length 32
Score (bit) 31.6
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953355|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_I21, 5'
(443 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9XJ56|ECP44_DAUCA Phosphoprotein ECPP44 OS=Daucus carota GN=... 32 1.5
sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus mu... 31 2.0
sp|Q8BQ33|CO042_MOUSE Uncharacterized protein C15orf42 homolog O... 31 2.6
sp|Q3T130|TM45B_BOVIN Transmembrane protein 45B OS=Bos taurus GN... 30 5.9
sp|Q0V6H6|SRB8_PHANO Mediator of RNA polymerase II transcription... 29 10.0
sp|Q9P227|RHG23_HUMAN Rho GTPase-activating protein 23 OS=Homo s... 29 10.0
sp|O86164|PMP11_CHLPN Probable outer membrane protein pmp11 OS=C... 29 10.0

>sp|Q9XJ56|ECP44_DAUCA Phosphoprotein ECPP44 OS=Daucus carota
GN=ECPP44 PE=1 SV=1
Length = 258

Score = 31.6 bits (70), Expect = 1.5
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +1

Query: 97 MEKIGEMLHMGGHRKEEEHPAHPPPQYAGDYD 192
MEKI E L GG + EEE A PPP A D
Sbjct: 142 MEKIKEKLPGGGKKVEEETVAPPPPPAAAPVD 173


>sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus
musculus GN=Arhgap23 PE=2 SV=2
Length = 1483

Score = 31.2 bits (69), Expect = 2.0
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2

Query: 212 VASIMVGCPPM-WPRPPMISMSTRDRCMQDHPL 307
VA +VG PP PRPP + + RD C PL
Sbjct: 4 VAFCLVGIPPRPEPRPPQLPLGPRDGCSSGRPL 36


>sp|Q8BQ33|CO042_MOUSE Uncharacterized protein C15orf42 homolog OS=Mus
musculus PE=2 SV=2
Length = 1889

Score = 30.8 bits (68), Expect = 2.6
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3

Query: 84 CAERDGEDRRDAAHGGSSQRRRAPSSPTT 170
C DG+ R+DAA GS + A SSP T
Sbjct: 1515 CCTADGKQRQDAAQQGSPRASEATSSPQT 1543


>sp|Q3T130|TM45B_BOVIN Transmembrane protein 45B OS=Bos taurus
GN=TMEM45B PE=2 SV=1
Length = 276

Score = 29.6 bits (65), Expect = 5.9
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +2

Query: 140 KKKSTQLTHHRNMQETMILAITVVVASIMVGCPPMWPRPPMISMSTRDRCM-----QDHP 304
K+KS QLTHH E + AI + A I + P P + + D + Q
Sbjct: 33 KEKSNQLTHHYQRLEIIEAAIRTLFAVIGILVEQFVPDGPHLHLYHEDHWVKLMNWQHST 92

Query: 305 LFMQVTVGWSSSSTTMVGLHLPMPMSR 385
+++ V T + H+P+ + R
Sbjct: 93 MYLFFAVSGIMDMLTYLITHVPLGLDR 119


>sp|Q0V6H6|SRB8_PHANO Mediator of RNA polymerase II transcription
subunit 12 OS=Phaeosphaeria nodorum GN=SRB8 PE=3 SV=1
Length = 1547

Score = 28.9 bits (63), Expect = 10.0
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3

Query: 63 SKQAQA---DCAERDGEDRRDAAHGGSSQRRRAP 155
SK A A DC + ED R AAH G+S+ R P
Sbjct: 24 SKPANALPPDCIDPTLEDERPAAHNGASEARPPP 57


>sp|Q9P227|RHG23_HUMAN Rho GTPase-activating protein 23 OS=Homo
sapiens GN=ARHGAP23 PE=1 SV=2
Length = 1491

Score = 28.9 bits (63), Expect = 10.0
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2

Query: 212 VASIMVGCPPM-WPRPPMISMSTRDRCMQDHP 304
VA +VG PP PRPP + + RD C P
Sbjct: 4 VAFCLVGIPPRPEPRPPQLPLGPRDGCSPRRP 35


>sp|O86164|PMP11_CHLPN Probable outer membrane protein pmp11
OS=Chlamydia pneumoniae GN=pmp11 PE=2 SV=1
Length = 928

Score = 28.9 bits (63), Expect = 10.0
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2

Query: 263 ISMSTRDRCMQDHPLFMQVTVG-WSSSSTTM-VGLHLPMPMSRPHPTMK 403
+S S D M+ H + + G WS+ +GL LP +S PHP K
Sbjct: 744 VSFSHSDNRMETHYTSLPESEGSWSNECIAGGIGLDLPFVLSNPHPLFK 792


tr_hit_id Q941N0
Definition tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam
Align length 31
Score (bit) 41.2
E-value 0.026
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953355|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_I21, 5'
(443 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam ... 41 0.026
tr|A9XE62|A9XE62_SOYBN KS-type dehydrin SLTI629 OS=Glycine max P... 38 0.22
tr|Q6PNN7|Q6PNN7_9FABA Cold-induced protein OS=Ammopiptanthus mo... 37 0.63
tr|Q93XL8|Q93XL8_CITPA Dehydrin COR15 OS=Citrus paradisi PE=2 SV=1 34 3.1
tr|Q8W267|Q8W267_CARPA Maturation-associated SRC1-like protein O... 34 3.1
tr|Q6VTH3|Q6VTH3_9ROSI COR15 OS=Citrus clementina x Citrus retic... 34 4.1
tr|B8LFE2|B8LFE2_SOYBN Low temperature inducible SLTI66 OS=Glyci... 34 4.1
tr|Q9SLJ2|Q9SLJ2_ARATH F20D21.23 protein (Putative uncharacteriz... 33 5.4
tr|Q8LG75|Q8LG75_ARATH Water stress-induced protein, putative OS... 33 5.4
tr|Q8H7A6|Q8H7A6_ARATH Putative uncharacterized protein OS=Arabi... 33 5.4
tr|Q9VYV7|Q9VYV7_DROME Phosphorylase kinase gamma OS=Drosophila ... 33 5.4
tr|Q9I7D0|Q9I7D0_DROME Phosphorylase kinase gamma, isoform A OS=... 33 5.4
tr|Q961E7|Q961E7_DROME Phosphorylase kinase gamma, isoform B OS=... 33 5.4
tr|Q7K4Y9|Q7K4Y9_DROME GH22314p OS=Drosophila melanogaster GN=Ph... 33 5.4
tr|Q29JA5|Q29JA5_DROPS GA14880 OS=Drosophila pseudoobscura pseud... 33 5.4
tr|B4R361|B4R361_DROSI GD17041 OS=Drosophila simulans GN=GD17041... 33 5.4
tr|B4Q1S3|B4Q1S3_DROYA GE15660 OS=Drosophila yakuba GN=GE15660 P... 33 5.4
tr|B4MT15|B4MT15_DROWI GK20076 OS=Drosophila willistoni GN=GK200... 33 5.4
tr|B4MAI4|B4MAI4_DROVI GJ15921 OS=Drosophila virilis GN=GJ15921 ... 33 5.4
tr|B4L681|B4L681_DROMO GI16230 OS=Drosophila mojavensis GN=GI162... 33 5.4
tr|B4JM18|B4JM18_DROGR GH24413 OS=Drosophila grimshawi GN=GH2441... 33 5.4
tr|B4IK49|B4IK49_DROSE GM13103 OS=Drosophila sechellia GN=GM1310... 33 5.4
tr|B4H3T7|B4H3T7_DROPE GL15144 OS=Drosophila persimilis GN=GL151... 33 5.4
tr|B3NUA3|B3NUA3_DROER GG18438 OS=Drosophila erecta GN=GG18438 P... 33 5.4
tr|B3MSC4|B3MSC4_DROAN GF20823 OS=Drosophila ananassae GN=GF2082... 33 5.4
tr|Q47KJ5|Q47KJ5_THEFY Putative transport protein OS=Thermobifid... 33 7.0
tr|Q9SPB5|Q9SPB5_MEDSA Cold acclimation responsive protein CAR2 ... 33 7.0
tr|Q8RW12|Q8RW12_RICCO Iron transport protein 2 OS=Ricinus commu... 33 7.0
tr|Q7Y1A0|Q7Y1A0_SOLSG 25 kDa protein dehydrin OS=Solanum sogara... 33 7.0
tr|Q68YT2|Q68YT2_VACCO Dehydrin COR11 OS=Vaccinium corymbosum GN... 33 7.0

>tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam
GN=DIP PE=4 SV=1
Length = 113

Score = 41.2 bits (95), Expect = 0.026
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1

Query: 94 VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGD 186
++ KIGE LH+GGH+KEEEH +Y G+
Sbjct: 4 IINKIGETLHVGGHKKEEEHKGEVHGEYKGE 34


>tr|A9XE62|A9XE62_SOYBN KS-type dehydrin SLTI629 OS=Glycine max PE=4
SV=1
Length = 113

Score = 38.1 bits (87), Expect = 0.22
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1

Query: 94 VMEKIGEMLHMGGHRKEEEHPA-HPPPQYAGDY 189
++ KIG LH+GGH+KEEEH H +Y G++
Sbjct: 4 IIHKIGGTLHVGGHKKEEEHKGEHHAGEYKGEH 36


>tr|Q6PNN7|Q6PNN7_9FABA Cold-induced protein OS=Ammopiptanthus
mongolicus GN=Cip PE=2 SV=1
Length = 154

Score = 36.6 bits (83), Expect = 0.63
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1

Query: 94 VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGD 186
++ KIGE LH+GG++KE+EH Y G+
Sbjct: 4 IINKIGETLHVGGNKKEDEHKVEGHGDYKGE 34


>tr|Q93XL8|Q93XL8_CITPA Dehydrin COR15 OS=Citrus paradisi PE=2 SV=1
Length = 137

Score = 34.3 bits (77), Expect = 3.1
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1

Query: 94 VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGDY 189
V+ KIGE LHMGG +KEE+ H ++GD+
Sbjct: 4 VIHKIGEALHMGGGQKEED--KHKAEHHSGDH 33


>tr|Q8W267|Q8W267_CARPA Maturation-associated SRC1-like protein
OS=Carica papaya GN=SRC PE=4 SV=1
Length = 93

Score = 34.3 bits (77), Expect = 3.1
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1

Query: 94 VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGDY 189
+M KI + LH+GG +KEEEH ++ G++
Sbjct: 4 IMHKIEDALHIGGRKKEEEHKGEHHGEHKGEH 35


>tr|Q6VTH3|Q6VTH3_9ROSI COR15 OS=Citrus clementina x Citrus
reticulata PE=2 SV=1
Length = 138

Score = 33.9 bits (76), Expect = 4.1
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1

Query: 94 VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGDY 189
V+ KIGE LHMGG +KEE+ H ++GD+
Sbjct: 4 VIHKIGEALHMGGGQKEED--KHKGEHHSGDH 33


>tr|B8LFE2|B8LFE2_SOYBN Low temperature inducible SLTI66 OS=Glycine
max PE=4 SV=1
Length = 90

Score = 33.9 bits (76), Expect = 4.1
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1

Query: 94 VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGDY 189
++ KI E LH+GGH+K EEH P ++ G++
Sbjct: 4 IIHKIEETLHVGGHKK-EEHKGEPHGEHKGEH 34


>tr|Q9SLJ2|Q9SLJ2_ARATH F20D21.23 protein (Putative uncharacterized
protein At1g54410) (At1g54410/F20D21_23) (At1g54410)
OS=Arabidopsis thaliana GN=At1g54410/F20D21_23 PE=4 SV=1
Length = 98

Score = 33.5 bits (75), Expect = 5.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = +1

Query: 94 VMEKIGEMLHMGG------HRKEEEHPAHPPPQYAGDY 189
++ KIG+ LH+GG H+KEEEH H +G++
Sbjct: 4 LINKIGDALHIGGGNKEGEHKKEEEHKKHVDEHKSGEH 41


>tr|Q8LG75|Q8LG75_ARATH Water stress-induced protein, putative
OS=Arabidopsis thaliana PE=4 SV=1
Length = 98

Score = 33.5 bits (75), Expect = 5.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = +1

Query: 94 VMEKIGEMLHMGG------HRKEEEHPAHPPPQYAGDY 189
++ KIG+ LH+GG H+KEEEH H +G++
Sbjct: 4 LINKIGDALHIGGGNKEGEHKKEEEHKKHVDEHKSGEH 41


>tr|Q8H7A6|Q8H7A6_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=4 SV=1
Length = 98

Score = 33.5 bits (75), Expect = 5.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = +1

Query: 94 VMEKIGEMLHMGG------HRKEEEHPAHPPPQYAGDY 189
++ KIG+ LH+GG H+KEEEH H +G++
Sbjct: 4 LINKIGDALHIGGGNKEGEHKKEEEHKKHVDEHKSGEH 41