DK953358 |
Clone id |
TST39A01NGRL0017_I24 |
Library |
TST39 |
Length |
569 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_I24. 5' end sequence. |
Accession |
DK953358 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL376Contig1 |
Sequence |
CGATCTGGTGTCGCGGAATCGATACGGCGAGCATGGCTACTGCAGGGGCAGCGAATTCTG TAGTGCCGAGGAATAGGACAAACCCCCGCAATGGGGGGCTTGACGATGATAGTATGGCGT TTGAGACGAGTCCCGGGGTGGAAGTATACAGCACGTTCGACAGCATGGGCATTCGAGATG AGCTTCTTCGTGGAATCTATGCCTATGGTTTTGAAAAACCTTCAGCTATTCAGCAGCGTG CCATACGGCCCATCATCCAGAATCGTGATGTCATAGCGCAGGCCCAGTCTGGTACTGGGA AGACTTCCATGATTGCCCTTGCTGTGTGCCAAATTATCGACACAACTGTTAGAGAGGTGC AGGCTTTAATCCTATCTCCGACTAGAGAGCTGGCAGCTCAGACTGAAAAGGTTATTTTAG CCATTGGTGATTATATAAATGTGCGGGCCCATTCTTGCATTGGTGGTAAAAACATTGGGG GAGGATATAAGAAAGCTTGAGAACGGTGTCCATGTGGTCTCTGGAACGCCAGGAAAGGGT TTATGACATGATAAAAAGGAGGACTTTAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q10I26 |
Definition |
sp|Q10I26|RH34_ORYSJ DEAD-box ATP-dependent RNA helicase 34 OS=Oryza sativa subsp. japonica |
Align length |
122 |
Score (bit) |
181.0 |
E-value |
6.0e-53 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953358|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_I24, 5' (569 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q10I26|RH34_ORYSJ DEAD-box ATP-dependent RNA helicase 34 OS=O... 181 6e-53 sp|Q5VNM3|RH2_ORYSJ DEAD-box ATP-dependent RNA helicase 2 OS=Ory... 181 6e-53 sp|P41380|IF4A3_NICPL Eukaryotic initiation factor 4A-3 OS=Nicot... 164 4e-47 sp|Q94A52|RH2_ARATH DEAD-box ATP-dependent RNA helicase 2 OS=Ara... 157 1e-44 sp|Q9C8J1|RH34_ARATH DEAD-box ATP-dependent RNA helicase 34 OS=A... 142 3e-40 sp|Q4P184|FAL1_USTMA ATP-dependent RNA helicase FAL1 OS=Ustilago... 143 1e-39 sp|P38919|IF4A3_HUMAN Eukaryotic initiation factor 4A-III OS=Hom... 142 7e-39 sp|Q2NL22|IF4A3_BOVIN Eukaryotic initiation factor 4A-III OS=Bos... 142 7e-39 sp|Q91VC3|IF4A3_MOUSE Eukaryotic initiation factor 4A-III OS=Mus... 140 3e-38 sp|Q4R3Q1|IF4A3_MACFA Eukaryotic initiation factor 4A-III OS=Mac... 139 7e-38 sp|Q9P735|FAL1_NEUCR ATP-dependent RNA helicase fal-1 OS=Neurosp... 137 3e-37 sp|Q4IAA0|FAL1_GIBZE ATP-dependent RNA helicase FAL1 OS=Gibberel... 136 7e-37 sp|Q0CAS8|FAL1_ASPTN ATP-dependent RNA helicase fal1 OS=Aspergil... 135 7e-37 sp|Q1DTB3|FAL1_COCIM ATP-dependent RNA helicase FAL1 OS=Coccidio... 134 2e-36 sp|Q5AUL4|FAL1_EMENI ATP-dependent RNA helicase fal1 OS=Emericel... 134 2e-36 sp|Q2UAK1|FAL1_ASPOR ATP-dependent RNA helicase fal1 OS=Aspergil... 134 2e-36 sp|A5AAE5|FAL1_ASPNC ATP-dependent RNA helicase fal1 OS=Aspergil... 134 2e-36 sp|A1C595|FAL1_ASPCL ATP-dependent RNA helicase fal1 OS=Aspergil... 134 2e-36 sp|Q2GWJ5|FAL1_CHAGB ATP-dependent RNA helicase FAL1 OS=Chaetomi... 135 2e-36 sp|A1D071|FAL1_NEOFI ATP-dependent RNA helicase fal1 OS=Neosarto... 134 2e-36 sp|A4QU31|FAL1_MAGGR ATP-dependent RNA helicase FAL1 OS=Magnapor... 134 3e-36 sp|Q4WEB4|FAL1_ASPFU ATP-dependent RNA helicase fal1 OS=Aspergil... 133 3e-36 sp|Q5KJJ2|FAL1_CRYNE ATP-dependent RNA helicase FAL1 OS=Cryptoco... 134 4e-36 sp|A7EM88|FAL1_SCLS1 ATP-dependent RNA helicase fal1 OS=Scleroti... 133 6e-36 sp|A6S4N4|FAL1_BOTFB ATP-dependent RNA helicase fal1 OS=Botryoti... 133 6e-36 sp|A6QSQ0|FAL1_AJECN ATP-dependent RNA helicase FAL1 OS=Ajellomy... 130 2e-35 sp|Q6C347|FAL1_YARLI ATP-dependent RNA helicase FAL1 OS=Yarrowia... 136 7e-35 sp|Q55D61|IF4A_DICDI Eukaryotic initiation factor 4A OS=Dictyost... 122 1e-33 sp|Q02748|IF4A_DROME Eukaryotic initiation factor 4A OS=Drosophi... 130 3e-33 sp|Q10055|FAL1_SCHPO ATP-dependent RNA helicase fal1 OS=Schizosa... 124 2e-32
>sp|Q10I26|RH34_ORYSJ DEAD-box ATP-dependent RNA helicase 34 OS=Oryza sativa subsp. japonica GN=Os03g0566800 PE=2 SV=1 Length = 404
Score = 181 bits (458), Expect(3) = 6e-53 Identities = 88/122 (72%), Positives = 103/122 (84%) Frame = +3
Query: 93 GGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXNRDV 272 G +DD+++ FETSPGVEV S+FD MGIR++LLRGIYAYGFEKPS RDV Sbjct: 12 GAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDV 71
Query: 273 IAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAH 452 IAQAQSGTGKTSMI+L+VCQI+DT VREVQALILSPTRELAAQTE+V+LAIGDYIN++ H Sbjct: 72 IAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVH 131
Query: 453 SC 458 +C Sbjct: 132 AC 133
Score = 45.1 bits (105), Expect(3) = 6e-53 Identities = 19/23 (82%), Positives = 23/23 (100%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIRKLE+GVHVVSGTPG+ Sbjct: 137 KSIGEDIRKLEHGVHVVSGTPGR 159
Score = 22.3 bits (46), Expect(3) = 6e-53 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 159 RVCDMIKRRTL 169
>sp|Q5VNM3|RH2_ORYSJ DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sativa subsp. japonica GN=Os01g0639100 PE=2 SV=1 Length = 404
Score = 181 bits (458), Expect(3) = 6e-53 Identities = 88/122 (72%), Positives = 103/122 (84%) Frame = +3
Query: 93 GGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXNRDV 272 G +DD+++ FETSPGVEV S+FD MGIRD+LLRGIYAYGFEKPS RDV Sbjct: 12 GAMDDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDV 71
Query: 273 IAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAH 452 IAQAQSGTGKTSMI+L+VCQI+DT VREVQALILSPTRELAAQTE+V+LAIGD+IN++ H Sbjct: 72 IAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVH 131
Query: 453 SC 458 +C Sbjct: 132 AC 133
Score = 45.1 bits (105), Expect(3) = 6e-53 Identities = 19/23 (82%), Positives = 23/23 (100%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIRKLE+GVHVVSGTPG+ Sbjct: 137 KSIGEDIRKLEHGVHVVSGTPGR 159
Score = 22.3 bits (46), Expect(3) = 6e-53 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 159 RVCDMIKRRTL 169
>sp|P41380|IF4A3_NICPL Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia PE=2 SV=1 Length = 391
Score = 164 bits (416), Expect(3) = 4e-47 Identities = 83/120 (69%), Positives = 95/120 (79%) Frame = +3
Query: 99 LDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXNRDVIA 278 +++D + FETS GVE ++F MGI+D+LLRG+Y YGFEKPS RDVIA Sbjct: 1 MEEDRLVFETSKGVEPIASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIA 60
Query: 279 QAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSC 458 QAQSGTGKTSMIAL VCQI+DT EVQALILSPTRELAAQTEKVILAIGDYINV+AH+C Sbjct: 61 QAQSGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHAC 120
Score = 41.6 bits (96), Expect(3) = 4e-47 Identities = 18/23 (78%), Positives = 22/23 (95%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIRKLE+GV VVSGTPG+ Sbjct: 124 KSVGEDIRKLEHGVQVVSGTPGR 146
Score = 22.3 bits (46), Expect(3) = 4e-47 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 146 RVCDMIKRRTL 156
>sp|Q94A52|RH2_ARATH DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2 Length = 408
Score = 157 bits (396), Expect(3) = 1e-44 Identities = 75/122 (61%), Positives = 95/122 (77%) Frame = +3
Query: 93 GGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXNRDV 272 G +DDD + FET+ G+E ++F+ MGI++++LRG+Y YGFEKPS RDV Sbjct: 16 GAMDDDKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDV 75
Query: 273 IAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAH 452 IAQAQSGTGKTSMIAL+VCQ++DT+ REVQALILSPTRELA QTEK I AIG + N++AH Sbjct: 76 IAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAH 135
Query: 453 SC 458 +C Sbjct: 136 AC 137
Score = 42.7 bits (99), Expect(3) = 1e-44 Identities = 18/22 (81%), Positives = 22/22 (100%) Frame = +1
Query: 472 TLGEDIRKLENGVHVVSGTPGK 537 ++GEDIRKLE+GVHVVSGTPG+ Sbjct: 142 SVGEDIRKLEHGVHVVSGTPGR 163
Score = 20.8 bits (42), Expect(3) = 1e-44 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRR+L Sbjct: 163 RVCDMIKRRSL 173
>sp|Q9C8J1|RH34_ARATH DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana GN=RH34 PE=2 SV=2 Length = 392
Score = 142 bits (357), Expect(3) = 3e-40 Identities = 66/122 (54%), Positives = 93/122 (76%) Frame = +3
Query: 93 GGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXNRDV 272 G LD++++ FET+ G++ +FD MG+ D++LRG+Y YG++KPS RDV Sbjct: 3 GTLDEENLVFETTKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDV 62
Query: 273 IAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAH 452 IAQAQSGTGKTSMIA++VCQI++ + R+VQ L+LSP+RELA+QTEK I AIG + N++AH Sbjct: 63 IAQAQSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAH 122
Query: 453 SC 458 +C Sbjct: 123 AC 124
Score = 42.0 bits (97), Expect(3) = 3e-40 Identities = 17/23 (73%), Positives = 21/23 (91%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDI+KLE GVH VSGTPG+ Sbjct: 128 KSIGEDIKKLERGVHAVSGTPGR 150
Score = 21.6 bits (44), Expect(3) = 3e-40 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RVYDMIKR +L Sbjct: 150 RVYDMIKRGSL 160
>sp|Q4P184|FAL1_USTMA ATP-dependent RNA helicase FAL1 OS=Ustilago maydis GN=FAL1 PE=3 SV=1 Length = 397
Score = 143 bits (361), Expect(3) = 1e-39 Identities = 70/125 (56%), Positives = 95/125 (76%), Gaps = 2/125 (1%) Frame = +3
Query: 90 NGGLD--DDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXN 263 +GG++ D +AFE+S V+V +TFD+MG++++LLRGIYAY FEKPS Sbjct: 2 SGGINAGDSKLAFESSEHVKVATTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRG 61
Query: 264 RDVIAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINV 443 RDVIAQAQSGTGKT+ ++++ Q IDTT+RE QAL+LSPTRELA Q + V+LA+GDY+NV Sbjct: 62 RDVIAQAQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLNV 121
Query: 444 RAHSC 458 + H+C Sbjct: 122 QCHAC 126
Score = 37.7 bits (86), Expect(3) = 1e-39 Identities = 15/22 (68%), Positives = 20/22 (90%) Frame = +1
Query: 472 TLGEDIRKLENGVHVVSGTPGK 537 ++GEDIRKL+ G H+VSGTPG+ Sbjct: 131 SVGEDIRKLDYGQHIVSGTPGR 152
Score = 21.9 bits (45), Expect(3) = 1e-39 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RVYDMI+RR L Sbjct: 152 RVYDMIRRRHL 162
>sp|P38919|IF4A3_HUMAN Eukaryotic initiation factor 4A-III OS=Homo sapiens GN=EIF4A3 PE=1 SV=4 Length = 411
Score = 142 bits (359), Expect(3) = 7e-39 Identities = 75/145 (51%), Positives = 99/145 (68%) Frame = +3
Query: 24 TASMATAGAANSVVPRNRTNPRNGGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYA 203 TA+MAT+G+A + + D + FETS V+V TFD+MG+R++LLRGIYA Sbjct: 4 TATMATSGSARKRLLKEE--------DMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYA 55
Query: 204 YGFEKPSXXXXXXXXXXXXNRDVIAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPT 383 YGFEKPS RDVIAQ+QSGTGKT+ +++V Q +D VRE QALIL+PT Sbjct: 56 YGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPT 115
Query: 384 RELAAQTEKVILAIGDYINVRAHSC 458 RELA Q +K +LA+GDY+NV+ H+C Sbjct: 116 RELAVQIQKGLLALGDYMNVQCHAC 140
Score = 36.6 bits (83), Expect(3) = 7e-39 Identities = 15/21 (71%), Positives = 19/21 (90%) Frame = +1
Query: 475 LGEDIRKLENGVHVVSGTPGK 537 +GEDIRKL+ G HVV+GTPG+ Sbjct: 146 VGEDIRKLDYGQHVVAGTPGR 166
Score = 21.6 bits (44), Expect(3) = 7e-39 Identities = 8/11 (72%), Positives = 11/11 (100%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV+DMI+RR+L Sbjct: 166 RVFDMIRRRSL 176
>sp|Q2NL22|IF4A3_BOVIN Eukaryotic initiation factor 4A-III OS=Bos taurus GN=EIF4A3 PE=2 SV=3 Length = 411
Score = 142 bits (359), Expect(3) = 7e-39 Identities = 75/145 (51%), Positives = 99/145 (68%) Frame = +3
Query: 24 TASMATAGAANSVVPRNRTNPRNGGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYA 203 TA+MAT+G+A + + D + FETS V+V TFD+MG+R++LLRGIYA Sbjct: 4 TATMATSGSARKRLLKEE--------DMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYA 55
Query: 204 YGFEKPSXXXXXXXXXXXXNRDVIAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPT 383 YGFEKPS RDVIAQ+QSGTGKT+ +++V Q +D VRE QALIL+PT Sbjct: 56 YGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPT 115
Query: 384 RELAAQTEKVILAIGDYINVRAHSC 458 RELA Q +K +LA+GDY+NV+ H+C Sbjct: 116 RELAVQIQKGLLALGDYMNVQCHAC 140
Score = 36.6 bits (83), Expect(3) = 7e-39 Identities = 15/21 (71%), Positives = 19/21 (90%) Frame = +1
Query: 475 LGEDIRKLENGVHVVSGTPGK 537 +GEDIRKL+ G HVV+GTPG+ Sbjct: 146 VGEDIRKLDYGQHVVAGTPGR 166
Score = 21.6 bits (44), Expect(3) = 7e-39 Identities = 8/11 (72%), Positives = 11/11 (100%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV+DMI+RR+L Sbjct: 166 RVFDMIRRRSL 176
>sp|Q91VC3|IF4A3_MOUSE Eukaryotic initiation factor 4A-III OS=Mus musculus GN=Eif4a3 PE=2 SV=3 Length = 411
Score = 140 bits (353), Expect(3) = 3e-38 Identities = 74/144 (51%), Positives = 98/144 (68%) Frame = +3
Query: 27 ASMATAGAANSVVPRNRTNPRNGGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAY 206 A+MAT+G+A + + D + FETS V+V TFD+MG+R++LLRGIYAY Sbjct: 5 ATMATSGSARKRLLKEE--------DMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAY 56
Query: 207 GFEKPSXXXXXXXXXXXXNRDVIAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTR 386 GFEKPS RDVIAQ+QSGTGKT+ +++V Q +D VRE QALIL+PTR Sbjct: 57 GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTR 116
Query: 387 ELAAQTEKVILAIGDYINVRAHSC 458 ELA Q +K +LA+GDY+NV+ H+C Sbjct: 117 ELAVQIQKGLLALGDYMNVQCHAC 140
Score = 36.6 bits (83), Expect(3) = 3e-38 Identities = 15/21 (71%), Positives = 19/21 (90%) Frame = +1
Query: 475 LGEDIRKLENGVHVVSGTPGK 537 +GEDIRKL+ G HVV+GTPG+ Sbjct: 146 VGEDIRKLDYGQHVVAGTPGR 166
Score = 21.6 bits (44), Expect(3) = 3e-38 Identities = 8/11 (72%), Positives = 11/11 (100%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV+DMI+RR+L Sbjct: 166 RVFDMIRRRSL 176
>sp|Q4R3Q1|IF4A3_MACFA Eukaryotic initiation factor 4A-III OS=Macaca fascicularis GN=EIF4A3 PE=2 SV=3 Length = 411
Score = 139 bits (350), Expect(3) = 7e-38 Identities = 73/145 (50%), Positives = 97/145 (66%) Frame = +3
Query: 24 TASMATAGAANSVVPRNRTNPRNGGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYA 203 TA+MAT+G+A + + D + FETS V+V TFD+MG+R++LLRGIYA Sbjct: 4 TATMATSGSARKRLLKEE--------DMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYA 55
Query: 204 YGFEKPSXXXXXXXXXXXXNRDVIAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPT 383 YGFEKPS RDVIAQ+QSGTGKT+ +++V Q +D VRE QALIL+P Sbjct: 56 YGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPA 115
Query: 384 RELAAQTEKVILAIGDYINVRAHSC 458 RELA Q +K +L +GDY+NV+ H+C Sbjct: 116 RELAVQIQKGLLTLGDYMNVQCHAC 140
Score = 36.6 bits (83), Expect(3) = 7e-38 Identities = 15/21 (71%), Positives = 19/21 (90%) Frame = +1
Query: 475 LGEDIRKLENGVHVVSGTPGK 537 +GEDIRKL+ G HVV+GTPG+ Sbjct: 146 VGEDIRKLDYGQHVVAGTPGR 166
Score = 21.6 bits (44), Expect(3) = 7e-38 Identities = 8/11 (72%), Positives = 11/11 (100%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV+DMI+RR+L Sbjct: 166 RVFDMIRRRSL 176
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QFA1 |
Definition |
tr|A7QFA1|A7QFA1_VITVI Chromosome undetermined scaffold_87, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
139 |
Score (bit) |
186.0 |
E-value |
5.0e-53 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953358|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_I24, 5' (569 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QFA1|A7QFA1_VITVI Chromosome undetermined scaffold_87, whol... 186 5e-53 tr|A9NUU4|A9NUU4_PICSI Putative uncharacterized protein OS=Picea... 184 1e-52 tr|B7EMG9|B7EMG9_ORYSJ cDNA clone:J033052B21, full insert sequen... 181 7e-52 tr|A3AJN1|A3AJN1_ORYSJ Putative uncharacterized protein OS=Oryza... 181 7e-52 tr|A2ZVV2|A2ZVV2_ORYSJ Putative uncharacterized protein OS=Oryza... 181 7e-52 tr|B8AKV8|B8AKV8_ORYSI Putative uncharacterized protein OS=Oryza... 179 3e-51 tr|Q2MJJ9|Q2MJJ9_MAIZE Putative RH2 protein (RNA helicase 2) (Pu... 174 5e-50 tr|B5AKW1|B5AKW1_PENAM eIF-4A OS=Pennisetum americanum PE=2 SV=1 174 2e-49 tr|A9TNS6|A9TNS6_PHYPA Predicted protein OS=Physcomitrella paten... 170 2e-49 tr|O65879|O65879_PEA Translation initiation factor OS=Pisum sati... 169 2e-48 tr|A8DX61|A8DX61_MEDSA DH OS=Medicago sativa PE=2 SV=1 169 3e-48 tr|A9U4K0|A9U4K0_PHYPA Predicted protein OS=Physcomitrella paten... 166 3e-48 tr|A5C5V5|A5C5V5_VITVI Putative uncharacterized protein OS=Vitis... 162 8e-46 tr|A8JBN7|A8JBN7_CHLRE Eukaryotic initiation factor OS=Chlamydom... 158 1e-45 tr|A8D930|A8D930_9GENT ATP-dependent DEAD-box helicase OS=Apocyn... 158 2e-43 tr|A4S618|A4S618_OSTLU Predicted protein OS=Ostreococcus lucimar... 155 4e-42 tr|A2WT17|A2WT17_ORYSI Putative uncharacterized protein OS=Oryza... 147 6e-42 tr|Q00XK3|Q00XK3_OSTTA Putative nicotiana eukaryotic (ISS) OS=Os... 151 2e-41 tr|B7QER9|B7QER9_IXOSC DEAD box ATP-dependent RNA helicase, puta... 146 9e-40 tr|Q0PZE7|Q0PZE7_BOMMO EIF4AIII protein OS=Bombyx mori PE=2 SV=1 146 2e-39 tr|B3SAG4|B3SAG4_TRIAD DEAD box ATP-dependent RNA helicase OS=Tr... 149 2e-39 tr|B6MJV0|B6MJV0_BRAFL Putative uncharacterized protein OS=Branc... 147 3e-39 tr|B6PI66|B6PI66_BRAFL Putative uncharacterized protein (Fragmen... 147 3e-39 tr|A5BYF4|A5BYF4_VITVI Putative uncharacterized protein OS=Vitis... 164 3e-39 tr|Q16GE2|Q16GE2_AEDAE DEAD box ATP-dependent RNA helicase OS=Ae... 144 4e-39 tr|Q7PQQ2|Q7PQQ2_ANOGA AGAP003089-PA OS=Anopheles gambiae GN=AGA... 143 8e-39 tr|A8WW00|A8WW00_CAEBR Putative uncharacterized protein OS=Caeno... 144 1e-38 tr|A8P212|A8P212_BRUMA ATP-dependent helicase DDX48, putative (F... 144 1e-38 tr|B0CXX1|B0CXX1_LACBS Predicted protein OS=Laccaria bicolor (st... 142 2e-38 tr|A8NX16|A8NX16_COPC7 Putative uncharacterized protein OS=Copri... 142 2e-38
>tr|A7QFA1|A7QFA1_VITVI Chromosome undetermined scaffold_87, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037338001 PE=4 SV=1 Length = 415
Score = 186 bits (473), Expect(3) = 5e-53 Identities = 94/139 (67%), Positives = 109/139 (78%) Frame = +3
Query: 42 AGAANSVVPRNRTNPRNGGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKP 221 A A SVVP NR RNG +DD+ + FET+ GVE +FD MGI+D+LLRGIYAYGFEKP Sbjct: 3 AAATASVVPANRGGRRNGAVDDEKLVFETTEGVEPIMSFDQMGIKDDLLRGIYAYGFEKP 62
Query: 222 SXXXXXXXXXXXXNRDVIAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQ 401 S RDVIAQAQSGTGKTSMIAL VCQ++DT+ REVQALILSPTRELA+Q Sbjct: 63 SAIQQRAVLPIIQGRDVIAQAQSGTGKTSMIALTVCQMVDTSNREVQALILSPTRELASQ 122
Query: 402 TEKVILAIGDYINVRAHSC 458 TEKVILAIGD+IN++AH+C Sbjct: 123 TEKVILAIGDFINIQAHAC 141
Score = 43.1 bits (100), Expect(3) = 5e-53 Identities = 18/23 (78%), Positives = 22/23 (95%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIRKLE GVH+VSGTPG+ Sbjct: 145 KSVGEDIRKLEYGVHIVSGTPGR 167
Score = 22.3 bits (46), Expect(3) = 5e-53 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 167 RVCDMIKRRTL 177
>tr|A9NUU4|A9NUU4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 408
Score = 184 bits (468), Expect(3) = 1e-52 Identities = 96/130 (73%), Positives = 107/130 (82%) Frame = +3
Query: 69 RNRTNPRNGGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXX 248 RNR N RN D+++ FETSPGVEV S+FD MGIRD+LLRGIY YGFEKPS Sbjct: 9 RNRNNGRNPD-GDENLIFETSPGVEVISSFDQMGIRDDLLRGIYQYGFEKPSAIQQRAVM 67
Query: 249 XXXXNRDVIAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIG 428 RDVIAQAQSGTGKTSMIALAVCQIIDT++REVQALI+SPTRELAAQTEKVILAIG Sbjct: 68 PIINGRDVIAQAQSGTGKTSMIALAVCQIIDTSIREVQALIVSPTRELAAQTEKVILAIG 127
Query: 429 DYINVRAHSC 458 D+INV+AH+C Sbjct: 128 DFINVQAHAC 137
Score = 43.9 bits (102), Expect(3) = 1e-52 Identities = 19/23 (82%), Positives = 22/23 (95%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIRKLE GVHVVSGTPG+ Sbjct: 141 KSIGEDIRKLEYGVHVVSGTPGR 163
Score = 22.3 bits (46), Expect(3) = 1e-52 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 163 RVCDMIKRRTL 173
>tr|B7EMG9|B7EMG9_ORYSJ cDNA clone:J033052B21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 404
Score = 181 bits (458), Expect(3) = 7e-52 Identities = 88/122 (72%), Positives = 103/122 (84%) Frame = +3
Query: 93 GGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXNRDV 272 G +DD+++ FETSPGVEV S+FD MGIRD+LLRGIYAYGFEKPS RDV Sbjct: 12 GAMDDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDV 71
Query: 273 IAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAH 452 IAQAQSGTGKTSMI+L+VCQI+DT VREVQALILSPTRELAAQTE+V+LAIGD+IN++ H Sbjct: 72 IAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVH 131
Query: 453 SC 458 +C Sbjct: 132 AC 133
Score = 45.1 bits (105), Expect(3) = 7e-52 Identities = 19/23 (82%), Positives = 23/23 (100%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIRKLE+GVHVVSGTPG+ Sbjct: 137 KSIGEDIRKLEHGVHVVSGTPGR 159
Score = 22.3 bits (46), Expect(3) = 7e-52 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 159 RVCDMIKRRTL 169
>tr|A3AJN1|A3AJN1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_011003 PE=3 SV=1 Length = 394
Score = 181 bits (458), Expect(3) = 7e-52 Identities = 88/122 (72%), Positives = 103/122 (84%) Frame = +3
Query: 93 GGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXNRDV 272 G +DD+++ FETSPGVEV S+FD MGIR++LLRGIYAYGFEKPS RDV Sbjct: 12 GAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDV 71
Query: 273 IAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAH 452 IAQAQSGTGKTSMI+L+VCQI+DT VREVQALILSPTRELAAQTE+V+LAIGDYIN++ H Sbjct: 72 IAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVH 131
Query: 453 SC 458 +C Sbjct: 132 AC 133
Score = 45.1 bits (105), Expect(3) = 7e-52 Identities = 19/23 (82%), Positives = 23/23 (100%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIRKLE+GVHVVSGTPG+ Sbjct: 137 KSIGEDIRKLEHGVHVVSGTPGR 159
Score = 22.3 bits (46), Expect(3) = 7e-52 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 159 RVCDMIKRRTL 169
>tr|A2ZVV2|A2ZVV2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_002674 PE=3 SV=1 Length = 394
Score = 181 bits (458), Expect(3) = 7e-52 Identities = 88/122 (72%), Positives = 103/122 (84%) Frame = +3
Query: 93 GGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXNRDV 272 G +DD+++ FETSPGVEV S+FD MGIRD+LLRGIYAYGFEKPS RDV Sbjct: 12 GAMDDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDV 71
Query: 273 IAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAH 452 IAQAQSGTGKTSMI+L+VCQI+DT VREVQALILSPTRELAAQTE+V+LAIGD+IN++ H Sbjct: 72 IAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVH 131
Query: 453 SC 458 +C Sbjct: 132 AC 133
Score = 45.1 bits (105), Expect(3) = 7e-52 Identities = 19/23 (82%), Positives = 23/23 (100%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIRKLE+GVHVVSGTPG+ Sbjct: 137 KSIGEDIRKLEHGVHVVSGTPGR 159
Score = 22.3 bits (46), Expect(3) = 7e-52 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 159 RVCDMIKRRTL 169
>tr|B8AKV8|B8AKV8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12293 PE=4 SV=1 Length = 404
Score = 179 bits (453), Expect(3) = 3e-51 Identities = 87/122 (71%), Positives = 103/122 (84%) Frame = +3
Query: 93 GGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXNRDV 272 G +DD+++ FETSPGVEV S+FD MGIR++LLRGIYAYGFEKPS RDV Sbjct: 12 GAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDV 71
Query: 273 IAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAH 452 IAQAQSGTGKTSMI+L+VCQI++T VREVQALILSPTRELAAQTE+V+LAIGDYIN++ H Sbjct: 72 IAQAQSGTGKTSMISLSVCQIVNTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVH 131
Query: 453 SC 458 +C Sbjct: 132 AC 133
Score = 45.1 bits (105), Expect(3) = 3e-51 Identities = 19/23 (82%), Positives = 23/23 (100%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIRKLE+GVHVVSGTPG+ Sbjct: 137 KSIGEDIRKLEHGVHVVSGTPGR 159
Score = 22.3 bits (46), Expect(3) = 3e-51 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 159 RVCDMIKRRTL 169
>tr|Q2MJJ9|Q2MJJ9_MAIZE Putative RH2 protein (RNA helicase 2) (Putative uncharacterized protein) OS=Zea mays GN=RH2 PE=2 SV=1 Length = 407
Score = 174 bits (440), Expect(3) = 5e-50 Identities = 89/137 (64%), Positives = 106/137 (77%) Frame = +3
Query: 48 AANSVVPRNRTNPRNGGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSX 227 AA + R RN +DD+++ FETSPGVEV S+FD MGI+D+LLRGIY YGFEKPS Sbjct: 2 AAPTTSRRGPGGARN--MDDENLTFETSPGVEVVSSFDQMGIKDDLLRGIYGYGFEKPSA 59
Query: 228 XXXXXXXXXXXNRDVIAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTE 407 RDVIAQAQSGTGKTSMI+L VCQI+DT VREVQALILSPTRELA+QTE Sbjct: 60 IQQRAVLPIINGRDVIAQAQSGTGKTSMISLTVCQIVDTAVREVQALILSPTRELASQTE 119
Query: 408 KVILAIGDYINVRAHSC 458 +V+LAIGD++NV+ H+C Sbjct: 120 RVMLAIGDHLNVQVHAC 136
Score = 45.8 bits (107), Expect(3) = 5e-50 Identities = 19/23 (82%), Positives = 23/23 (100%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIR+LENGVHVVSGTPG+ Sbjct: 140 KSIGEDIRRLENGVHVVSGTPGR 162
Score = 22.3 bits (46), Expect(3) = 5e-50 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 162 RVCDMIKRRTL 172
>tr|B5AKW1|B5AKW1_PENAM eIF-4A OS=Pennisetum americanum PE=2 SV=1 Length = 407
Score = 174 bits (441), Expect(3) = 2e-49 Identities = 83/120 (69%), Positives = 100/120 (83%) Frame = +3
Query: 99 LDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXNRDVIA 278 +DD+++ FETSPGVEV S+FD MGI+D+LLRGIY YGFEKPS RDVIA Sbjct: 17 MDDENLTFETSPGVEVVSSFDQMGIKDDLLRGIYGYGFEKPSAIQQRAVLPIINGRDVIA 76
Query: 279 QAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSC 458 QAQSGTGK+SMI+L VCQI+DT VREVQALILSPTRELA+QTEKV+LA+GDY+N++ H+C Sbjct: 77 QAQSGTGKSSMISLTVCQIVDTAVREVQALILSPTRELASQTEKVMLAVGDYLNIQVHAC 136
Score = 43.5 bits (101), Expect(3) = 2e-49 Identities = 18/23 (78%), Positives = 22/23 (95%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++ EDIR+LENGVHVVSGTPG+ Sbjct: 140 KSISEDIRRLENGVHVVSGTPGR 162
Score = 22.3 bits (46), Expect(3) = 2e-49 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 162 RVCDMIKRRTL 172
>tr|A9TNS6|A9TNS6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_60709 PE=4 SV=1 Length = 397
Score = 170 bits (431), Expect(3) = 2e-49 Identities = 86/119 (72%), Positives = 98/119 (82%) Frame = +3
Query: 102 DDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSXXXXXXXXXXXXNRDVIAQ 281 + +++ FETS GVEV S+FD MGIR++LLRGIYAYGFEKPS RD IAQ Sbjct: 8 EGENLVFETSAGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVMPIISGRDAIAQ 67
Query: 282 AQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSC 458 AQSGTGKTSMIALAVCQ+IDT REVQALILSPTRELAAQTEKVILAIGD++NV+AH+C Sbjct: 68 AQSGTGKTSMIALAVCQMIDTATREVQALILSPTRELAAQTEKVILAIGDFMNVQAHAC 126
Score = 43.9 bits (102), Expect(3) = 2e-49 Identities = 19/23 (82%), Positives = 22/23 (95%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIRKLE GVHVVSGTPG+ Sbjct: 130 KSIGEDIRKLEYGVHVVSGTPGR 152
Score = 25.8 bits (55), Expect(3) = 2e-49 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RVYDMIKRRTL Sbjct: 152 RVYDMIKRRTL 162
>tr|O65879|O65879_PEA Translation initiation factor OS=Pisum sativum GN=eIF-4A PE=2 SV=1 Length = 407
Score = 169 bits (429), Expect(3) = 2e-48 Identities = 87/137 (63%), Positives = 105/137 (76%) Frame = +3
Query: 48 AANSVVPRNRTNPRNGGLDDDSMAFETSPGVEVYSTFDSMGIRDELLRGIYAYGFEKPSX 227 A SVVP NR + ++ M FET+ GV+ +TF+ MGI+++LLRGIYAYGFEKPS Sbjct: 2 ATTSVVPANRGRTV---ISNEDMDFETTEGVKAIATFEGMGIKEDLLRGIYAYGFEKPSA 58
Query: 228 XXXXXXXXXXXNRDVIAQAQSGTGKTSMIALAVCQIIDTTVREVQALILSPTRELAAQTE 407 RDVIAQAQSGTGKTSMIAL VCQ++DT+VREVQALI+SPTRELA QTE Sbjct: 59 IQQRAVAPIIQGRDVIAQAQSGTGKTSMIALTVCQVVDTSVREVQALIVSPTRELATQTE 118
Query: 408 KVILAIGDYINVRAHSC 458 KVILAIGD+IN++AH+C Sbjct: 119 KVILAIGDHINIQAHAC 135
Score = 44.7 bits (104), Expect(3) = 2e-48 Identities = 19/23 (82%), Positives = 23/23 (100%) Frame = +1
Query: 469 KTLGEDIRKLENGVHVVSGTPGK 537 K++GEDIRKLE+GVHVVSGTPG+ Sbjct: 139 KSVGEDIRKLEHGVHVVSGTPGR 161
Score = 22.3 bits (46), Expect(3) = 2e-48 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2
Query: 536 RVYDMIKRRTL 568 RV DMIKRRTL Sbjct: 161 RVCDMIKRRTL 171
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