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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953384
Clone id TST39A01NGRL0017_K02
Library
Length 469
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_K02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTATGATGAGCCTGTGACAGGGGGTGAATGCAACAGCGTTGTGGAGAAGCTTGGAGACTA
TCTTGTTGATCAAGGCTATTAGAACTTTGTATTGTGCAGCATGAGCGCATTGTTTGGTGT
GGGCCAATAATATAGGATTGGAGAGGTGAGCTTCTGAAAGTTTTTGCTGGGTGTTTCACG
ACTTATTTATTTGGTTATCCAGCCAGCCATTCATGGCAAGATGCAAGGCTGCCTTGCAGG
CTGAAGCAGCTCTTGCTTTTTCCTTACTGGAGCTTTCGCAAGCTGCTTGCAATGGCAATT
TCTTGTACATACTGGCTATGATGTGCTTTATAAAGGCAAATTACAGAGTGAGTTTTTTCG
GGGGTGCCTTAGGAATCGAGGTTGGCATTAAATCTGCATCTTTGCTTGCTGTGCCTGTGT
AGTTTTCAGTCTTGCGACTTTTCATATGTATAATGTAGATGCTTACCTA
■■Homology search results ■■ -
sp_hit_id Q9ST98
Definition sp|Q9ST98|PROF3_TOBAC Profilin-3 OS=Nicotiana tabacum
Align length 26
Score (bit) 51.2
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953384|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_K02, 5'
         (469 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ST98|PROF3_TOBAC Profilin-3 OS=Nicotiana tabacum GN=PRO3 PE...    51   2e-06
sp|Q9ST99|PROF2_TOBAC Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE...    51   2e-06
sp|Q41344|PROF1_SOLLC Profilin-1 OS=Solanum lycopersicum GN=PRO1...    51   2e-06
sp|O65810|PROF2_SOYBN Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1      51   3e-06
sp|P49234|PROF3_WHEAT Profilin-3 OS=Triticum aestivum GN=PRO3 PE...    50   4e-06
sp|P49233|PROF2_WHEAT Profilin-2 OS=Triticum aestivum GN=PRO2 PE...    50   4e-06
sp|Q9STB6|PROF2_HEVBR Profilin-2 OS=Hevea brasiliensis GN=PRO2 P...    50   4e-06
sp|P49232|PROF1_WHEAT Profilin-1 (Fragment) OS=Triticum aestivum...    50   4e-06
sp|Q5EF31|PROF_CROSA Profilin OS=Crocus sativus PE=1 SV=1              49   1e-05
sp|Q941H7|PROF_LITCN Profilin OS=Litchi chinensis PE=1 SV=1            49   1e-05
sp|Q9XF37|PROF_APIGR Profilin OS=Apium graveolens PE=1 SV=1            49   1e-05
sp|P41372|PROF1_TOBAC Profilin-1 OS=Nicotiana tabacum GN=PRO1 PE...    48   2e-05
sp|O65809|PROF1_SOYBN Profilin-1 OS=Glycine max GN=PRO1 PE=1 SV=1      48   2e-05
sp|Q5FX67|PROF_CUCME Profilin OS=Cucumis melo PE=1 SV=1                48   2e-05
sp|P25816|PROF_BETVE Profilin OS=Betula verrucosa GN=BETVII PE=1...    48   2e-05
sp|Q9FR39|PROF5_MAIZE Profilin-5 OS=Zea mays GN=PRO5 PE=1 SV=1         48   2e-05
sp|O22655|PROF4_MAIZE Profilin-4 OS=Zea mays GN=PRO4 PE=1 SV=1         48   2e-05
sp|Q9SNW5|PROF3_LILLO Profilin-3 OS=Lilium longiflorum PE=2 SV=1       48   2e-05
sp|Q9SNW6|PROF2_LILLO Profilin-2 OS=Lilium longiflorum PE=2 SV=1       48   2e-05
sp|O82572|PROF1_RICCO Profilin-1 OS=Ricinus communis GN=PRO1 PE=...    48   2e-05
sp|P52184|PROF1_HORVU Profilin-1 OS=Hordeum vulgare GN=PRO1 PE=2...    48   2e-05
sp|O04725|PROF_CYNDA Profilin OS=Cynodon dactylon GN=PRO1 PE=1 SV=1    47   3e-05
sp|Q9XF42|PROF3_MALDO Profilin-3 OS=Malus domestica PE=1 SV=1          47   3e-05
sp|Q64LH0|PROF3_AMBAR Profilin-3 OS=Ambrosia artemisiifolia GN=D...    47   3e-05
sp|Q42418|PROF2_ARATH Profilin-2 OS=Arabidopsis thaliana GN=PRO2...    47   3e-05
sp|Q8SAE6|PROF_DAUCA Profilin OS=Daucus carota PE=1 SV=1               47   4e-05
sp|Q94JN2|PROF_ANACO Profilin OS=Ananas comosus PE=1 SV=1              47   4e-05
sp|Q9FUD1|PROFA_ORYSJ Profilin-A OS=Oryza sativa subsp. japonica...    47   4e-05
sp|Q9LEI8|PROF6_HEVBR Profilin-6 OS=Hevea brasiliensis PE=1 SV=1       47   4e-05
sp|O24282|PROF3_PHLPR Profilin-3 OS=Phleum pratense GN=PRO3 PE=1...    47   4e-05

>sp|Q9ST98|PROF3_TOBAC Profilin-3 OS=Nicotiana tabacum GN=PRO3 PE=2
           SV=1
          Length = 133

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           Y+EPVT G+CN VVEK+GDYLVDQGY
Sbjct: 108 YEEPVTPGQCNMVVEKIGDYLVDQGY 133


>sp|Q9ST99|PROF2_TOBAC Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2
           SV=1
          Length = 134

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           Y+EPVT G+CN VVEK+GDYLVDQGY
Sbjct: 109 YEEPVTPGQCNMVVEKIGDYLVDQGY 134


>sp|Q41344|PROF1_SOLLC Profilin-1 OS=Solanum lycopersicum GN=PRO1
           PE=2 SV=1
          Length = 133

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           Y+EPVT G+CN VVEK+GDYLVDQGY
Sbjct: 108 YEEPVTPGQCNMVVEKIGDYLVDQGY 133


>sp|O65810|PROF2_SOYBN Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1
          Length = 131

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           YDEP+T G+CN VVE+LGDYL+DQGY
Sbjct: 106 YDEPMTPGQCNMVVERLGDYLIDQGY 131


>sp|P49234|PROF3_WHEAT Profilin-3 OS=Triticum aestivum GN=PRO3 PE=2
           SV=1
          Length = 140

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           YDEP+T G+CN VVE+LGDYL+DQGY
Sbjct: 106 YDEPMTPGQCNLVVERLGDYLIDQGY 131


>sp|P49233|PROF2_WHEAT Profilin-2 OS=Triticum aestivum GN=PRO2 PE=2
           SV=1
          Length = 141

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           YDEP+T G+CN VVE+LGDYL+DQGY
Sbjct: 106 YDEPMTPGQCNLVVERLGDYLIDQGY 131


>sp|Q9STB6|PROF2_HEVBR Profilin-2 OS=Hevea brasiliensis GN=PRO2 PE=1
           SV=1
          Length = 131

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           YDEP+T G+CN +VE+LGDYL+DQGY
Sbjct: 106 YDEPMTPGQCNMIVERLGDYLIDQGY 131


>sp|P49232|PROF1_WHEAT Profilin-1 (Fragment) OS=Triticum aestivum
           GN=PRO1 PE=2 SV=1
          Length = 138

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           YDEP+T G+CN VVE+LGDYL+DQGY
Sbjct: 106 YDEPMTPGQCNLVVERLGDYLIDQGY 131


>sp|Q5EF31|PROF_CROSA Profilin OS=Crocus sativus PE=1 SV=1
          Length = 131

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           YDEP+T G+CN VVE+LGDYL++QGY
Sbjct: 106 YDEPMTPGQCNLVVERLGDYLIEQGY 131


>sp|Q941H7|PROF_LITCN Profilin OS=Litchi chinensis PE=1 SV=1
          Length = 131

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQG 76
           YDEP+T G+CN VVE+LGDYLVDQG
Sbjct: 106 YDEPMTPGQCNMVVERLGDYLVDQG 130
tr_hit_id Q8L8C7
Definition tr|Q8L8C7|Q8L8C7_CERRI Profilin OS=Ceratopteris richardii
Align length 26
Score (bit) 51.6
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953384|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_K02, 5'
         (469 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8L8C7|Q8L8C7_CERRI Profilin OS=Ceratopteris richardii PE=2 SV=1    52   2e-05
tr|Q1EMQ3|Q1EMQ3_PLAMJ Profilin OS=Plantago major GN=pf1 PE=2 SV=1     52   2e-05
tr|Q9ZTM2|Q9ZTM2_PETHY Profilin (Fragment) OS=Petunia hybrida GN...    51   3e-05
tr|Q9SMC0|Q9SMC0_TOBAC Profilin OS=Nicotiana tabacum GN=pronp1 P...    51   3e-05
tr|B6EF35|B6EF35_WHEAT Profilin OS=Triticum aestivum GN=pro4 PE=...    50   4e-05
tr|A9P2A1|A9P2A1_PICSI Profilin OS=Picea sitchensis PE=2 SV=1          50   6e-05
tr|A9NNS7|A9NNS7_PICSI Profilin OS=Picea sitchensis PE=2 SV=1          50   6e-05
tr|B6CAT2|B6CAT2_GERHY Putative actin-and phospholipid-binding p...    49   1e-04
tr|B3TLV2|B3TLV2_ELAGV Profilin 2 OS=Elaeis guineensis var. tene...    49   1e-04
tr|Q2PQ57|Q2PQ57_LITCN Profilin OS=Litchi chinensis PE=2 SV=1          49   2e-04
tr|A1Z294|A1Z294_CARMI Profilin OS=Caryota mitis PE=2 SV=1             49   2e-04
tr|A1Z292|A1Z292_COCNU Profilin OS=Cocos nucifera PE=2 SV=1            49   2e-04
tr|A9NMR7|A9NMR7_PICSI Profilin OS=Picea sitchensis PE=2 SV=1          48   2e-04
tr|A7XZJ7|A7XZJ7_SOYBN Profilin OS=Glycine max PE=2 SV=1               48   2e-04
tr|A5BLM8|A5BLM8_VITVI Profilin OS=Vitis vinifera GN=GSVIVT00016...    48   2e-04
tr|A1Z293|A1Z293_ROYRE Profilin OS=Roystonea regia PE=2 SV=1           48   2e-04
tr|A1KXK1|A1KXK1_ELAGV Profilin OS=Elaeis guineensis var. tenera...    48   2e-04
tr|A1KXK0|A1KXK0_ELAGV Profilin OS=Elaeis guineensis var. tenera...    48   2e-04
tr|Q9AXH5|Q9AXH5_CORAV Profilin OS=Corylus avellana PE=2 SV=1          48   3e-04
tr|Q9AXH4|Q9AXH4_CORAV Profilin OS=Corylus avellana PE=2 SV=1          48   3e-04
tr|Q84MM5|Q84MM5_CUCMR Profilin OS=Cucumis melo var. reticulatus...    48   3e-04
tr|Q7E369|Q7E369_CUCMR Profilin OS=Cucumis melo var. reticulatus...    48   3e-04
tr|Q64LH3|Q64LH3_9ROSA Profilin OS=Humulus scandens GN=LCM9 PE=2...    48   3e-04
tr|B6T7X9|B6T7X9_MAIZE Profilin-2 OS=Zea mays PE=2 SV=1                48   3e-04
tr|B4FV68|B4FV68_MAIZE Profilin-2 OS=Zea mays PE=2 SV=1                48   3e-04
tr|B4FTX3|B4FTX3_MAIZE Putative uncharacterized protein OS=Zea m...    48   3e-04
tr|A9P8K3|A9P8K3_POPTR Profilin OS=Populus trichocarpa PE=2 SV=1       48   3e-04
tr|A5AQ89|A5AQ89_VITVI Profilin OS=Vitis vinifera GN=GSVIVT00032...    48   3e-04
tr|A4KA45|A4KA45_CORAV Profilin OS=Corylus avellana PE=2 SV=1          48   3e-04
tr|A4K9Z8|A4K9Z8_BETVE Profilin OS=Betula verrucosa PE=2 SV=1          48   3e-04

>tr|Q8L8C7|Q8L8C7_CERRI Profilin OS=Ceratopteris richardii PE=2 SV=1
          Length = 133

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 20/26 (76%), Positives = 25/26 (96%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           YD+PVTGG+CNSVVEK+GDYL +QG+
Sbjct: 108 YDDPVTGGQCNSVVEKIGDYLCEQGF 133


>tr|Q1EMQ3|Q1EMQ3_PLAMJ Profilin OS=Plantago major GN=pf1 PE=2 SV=1
          Length = 131

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQG 76
           YDEP+TGG+CN VVEK+GDYL+DQG
Sbjct: 106 YDEPMTGGQCNMVVEKIGDYLIDQG 130


>tr|Q9ZTM2|Q9ZTM2_PETHY Profilin (Fragment) OS=Petunia hybrida
           GN=PGPS/NH20 PE=2 SV=1
          Length = 124

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           Y+EPVT G+CN VVEK+GDYLVDQGY
Sbjct: 99  YEEPVTPGQCNMVVEKIGDYLVDQGY 124


>tr|Q9SMC0|Q9SMC0_TOBAC Profilin OS=Nicotiana tabacum GN=pronp1 PE=3
           SV=1
          Length = 134

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           Y+EPVT G+CN VVEK+GDYLVDQGY
Sbjct: 109 YEEPVTPGQCNMVVEKIGDYLVDQGY 134


>tr|B6EF35|B6EF35_WHEAT Profilin OS=Triticum aestivum GN=pro4 PE=2
           SV=1
          Length = 131

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           YDEP+T G+CN VVE+LGDYL+DQGY
Sbjct: 106 YDEPMTPGQCNLVVERLGDYLIDQGY 131


>tr|A9P2A1|A9P2A1_PICSI Profilin OS=Picea sitchensis PE=2 SV=1
          Length = 132

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQG 76
           YDEPVT GECN +VE+LGDYL+DQG
Sbjct: 107 YDEPVTPGECNMIVERLGDYLIDQG 131


>tr|A9NNS7|A9NNS7_PICSI Profilin OS=Picea sitchensis PE=2 SV=1
          Length = 132

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQG 76
           YDEPVT GECN +VE+LGDYL+DQG
Sbjct: 107 YDEPVTPGECNMIVERLGDYLIDQG 131


>tr|B6CAT2|B6CAT2_GERHY Putative actin-and phospholipid-binding
           protein OS=Gerbera hybrida PE=2 SV=1
          Length = 131

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 18/26 (69%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           YDEP+T G+CN +VE+LGDYL+DQG+
Sbjct: 106 YDEPMTPGQCNMIVERLGDYLIDQGF 131


>tr|B3TLV2|B3TLV2_ELAGV Profilin 2 OS=Elaeis guineensis var. tenera
           PE=2 SV=1
          Length = 131

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 18/26 (69%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQGY 79
           YDEP+T G+CN ++E+LGDYLVDQG+
Sbjct: 106 YDEPMTPGQCNMIIERLGDYLVDQGF 131


>tr|Q2PQ57|Q2PQ57_LITCN Profilin OS=Litchi chinensis PE=2 SV=1
          Length = 131

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +2

Query: 2   YDEPVTGGECNSVVEKLGDYLVDQG 76
           YDEP+T G+CN VVE+LGDYLVDQG
Sbjct: 106 YDEPMTPGQCNMVVERLGDYLVDQG 130