DK953390 |
Clone id |
TST39A01NGRL0017_K08 |
Library |
TST39 |
Length |
560 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_K08. 5' end sequence. |
Accession |
DK953390 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL72Contig2 |
Sequence |
CAAAAGGCTCAGAAGGAAGCGAGTCCAGTGTTTGCAAGACATCTTAATTCTCCTCCTTTG CCACTTAGCTCCATGGATTGCACATTTGCGGCGCAGGCCTCTCCGCAAACAGCTGCGGCT CCCCTAGCAGCCCTCTCACACAAGTCTTCTGTTCAGATCCCGCGGGGGGCTCTCCGCTCA AACTTCTGTGTGCAGACAGGTCTTTTAAAGTTGGATATTCAGAGAGGGATAAAGTCAAGG TTGAGGAGAAACAGGGGCAGTGTCAAGTTGGCAGTTGTTAGAGCAAGTGGTGATACTCAA GATAGTGGGTCTCCGATAGCTCCGTTCCAGCCAGAGTCTCCTACCGGTCAGTACTTGGCA CAGCTTCTTCAAAGCCATCCCCATCTTGTTCCTGCTGCTGTTGAGCAAGAGCTTGAGAAG CTTGCTGAGAATCGTACTTTGCAGGATTCTTCCACTGAGCCTAGCTCAAAGGGTTCCGAG CTTGTCCTCTACAGACGGATTGCTGAGCTCAAAGAGCAGGAAAGGCAAAAAGCATTGGAA GAGATAAATCTACACCCTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5KJR1 |
Definition |
sp|Q5KJR1|IWS1_CRYNE Transcription factor IWS1 OS=Cryptococcus neoformans |
Align length |
49 |
Score (bit) |
33.9 |
E-value |
0.56 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPW2 |
Definition |
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
103 |
Score (bit) |
114.0 |
E-value |
5.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953390|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_K08, 5' (560 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 114 5e-24 tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 114 5e-24 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 106 1e-21 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 103 8e-21 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 101 2e-20 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 101 2e-20 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 101 2e-20 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 100 4e-20 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 100 4e-20 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 97 8e-19 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 94 4e-18 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 93 9e-18 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 92 2e-17 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 90 9e-17 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 90 9e-17 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 90 9e-17 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 89 1e-16 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 88 3e-16 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 87 6e-16 tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia ... 87 8e-16 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 85 2e-15 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 85 2e-15 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 82 3e-14 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 79 2e-13 tr|A5BZ18|A5BZ18_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12 tr|A4S3L6|A4S3L6_OSTLU Predicted protein OS=Ostreococcus lucimar... 63 1e-08 tr|B6TD75|B6TD75_MAIZE Putative uncharacterized protein OS=Zea m... 61 5e-08 tr|Q010E1|Q010E1_OSTTA Homology to unknown gene (Fragment) OS=Os... 60 1e-07 tr|A8IKK2|A8IKK2_CHLRE Predicted protein OS=Chlamydomonas reinha... 59 2e-07
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 114 bits (284), Expect = 5e-24 Identities = 61/103 (59%), Positives = 74/103 (71%) Frame = +1
Query: 238 RLRRNRGSVKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELE 417 R RRN G VRA+G+ +S PIAP Q ESPTGQ+L+QLL+ HPHL+PAAVEQ+LE Sbjct: 74 RSRRNFG------VRAAGNYDESSKPIAPLQLESPTGQFLSQLLKDHPHLLPAAVEQQLE 127
Query: 418 KLAENRTLQDSSTEPSSKGSELVLYRRIAELKEQERQKALEEI 546 +L +R PSS +ELVLYRRIAE+K ER+KALEEI Sbjct: 128 RLVADRDAAAQQDPPSSTSTELVLYRRIAEVKAAERRKALEEI 170
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 114 bits (284), Expect = 5e-24 Identities = 60/99 (60%), Positives = 73/99 (73%), Gaps = 2/99 (2%) Frame = +1
Query: 256 GSVKLAVVRASGDTQDSGS--PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAE 429 G K +VRAS SGS PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 4 GCKKCTIVRASASADSSGSAAPIAPLQLESPIGQFLSQILISHPHLVPAAVEQQLEQLQT 63
Query: 430 NRTLQDSSTEPSSKGSELVLYRRIAELKEQERQKALEEI 546 +R ++ E S+ G+ELVLYRRIAE+K ER+KALEEI Sbjct: 64 DRDAEEHKEESSASGTELVLYRRIAEVKANERKKALEEI 102
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 106 bits (264), Expect = 1e-21 Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 4/101 (3%) Frame = +1
Query: 256 GSVKLAVVRASGDTQDSGS----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKL 423 GS + VRAS + S PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 59 GSRRCMAVRASSSSSSDSSGSIVPIAPLQLESPIGQFLSQILVSHPHLVPAAVEQQLEQL 118
Query: 424 AENRTLQDSSTEPSSKGSELVLYRRIAELKEQERQKALEEI 546 +R + +PS+ G++LVLYRRIAE K +R+KALEEI Sbjct: 119 QTDRDSEKQKEDPSATGTDLVLYRRIAEAKANDRRKALEEI 159
>tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 401
Score = 103 bits (256), Expect = 8e-21 Identities = 52/92 (56%), Positives = 69/92 (75%) Frame = +1
Query: 271 AVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDS 450 A + +S D+ S + IAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R + Sbjct: 68 ASLSSSSDSSGSIASIAPLQLESPVGQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEKQ 127
Query: 451 STEPSSKGSELVLYRRIAELKEQERQKALEEI 546 EPS+ ++LVLYR+IAE+K ER+KALEEI Sbjct: 128 KEEPSATSTDLVLYRKIAEVKANERRKALEEI 159
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 101 bits (252), Expect = 2e-20 Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 6/97 (6%) Frame = +1
Query: 274 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 438 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 439 LQDSSTEPSS-KGSELVLYRRIAELKEQERQKALEEI 546 Q + + +S G+++VLYRRIAELKE ER++ LEEI Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEI 169
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 101 bits (252), Expect = 2e-20 Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 6/97 (6%) Frame = +1
Query: 274 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 438 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 439 LQDSSTEPSS-KGSELVLYRRIAELKEQERQKALEEI 546 Q + + +S G+++VLYRRIAELKE ER++ LEEI Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEI 169
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 101 bits (252), Expect = 2e-20 Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 6/97 (6%) Frame = +1
Query: 274 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 438 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 439 LQDSSTEPSS-KGSELVLYRRIAELKEQERQKALEEI 546 Q + + +S G+++VLYRRIAELKE ER++ LEEI Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEI 169
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 100 bits (250), Expect = 4e-20 Identities = 53/92 (57%), Positives = 71/92 (77%), Gaps = 1/92 (1%) Frame = +1
Query: 274 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 453 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 454 TEPSS-KGSELVLYRRIAELKEQERQKALEEI 546 + SS G+++VLYRRIAE+KE+ER++ALEEI Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRALEEI 160
>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1 Length = 342
Score = 100 bits (250), Expect = 4e-20 Identities = 53/92 (57%), Positives = 71/92 (77%), Gaps = 1/92 (1%) Frame = +1
Query: 274 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 453 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 454 TEPSS-KGSELVLYRRIAELKEQERQKALEEI 546 + SS G+++VLYRRIAE+KE+ER++ALEEI Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRALEEI 160
>tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022976001 PE=4 SV=1 Length = 342
Score = 96.7 bits (239), Expect = 8e-19 Identities = 50/95 (52%), Positives = 69/95 (72%), Gaps = 4/95 (4%) Frame = +1
Query: 274 VVRASG----DTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTL 441 +VRAS D+ +S +PIAP + ESP G++L ++L SHPHLVPAAVE++LE+ +R Sbjct: 10 MVRASATVDNDSYESAAPIAPLRLESPIGRFLTEILISHPHLVPAAVERQLEQFQTDRDA 69
Query: 442 QDSSTEPSSKGSELVLYRRIAELKEQERQKALEEI 546 + E S+ G EL+LYRRIA++K ER+KALEEI Sbjct: 70 EGHKQESSASGIELLLYRRIAKVKANERKKALEEI 104
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