DK953397 |
Clone id |
TST39A01NGRL0017_K15 |
Library |
TST39 |
Length |
566 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_K15. 5' end sequence. |
Accession |
DK953397 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL903Contig1 |
Sequence |
GCACGTTGCCATTTCTTCATGGTGGAAATTTGAGTCAAGCTGAGCTCCAAAGCTTAACGG ATACTGAATTTTGGATGGTGATGGACACCTCCTCTTCAAAGAGCATATTCTTGACCTGGA AAGATTTAAGCGTCAAAGTCCCAGCTGGAGGCAGCCATGGGCAGCCAGCTCGCTACTTGC TGCAGAATGTGAGCGGCTATGCAGAGCCTGGCTCCCTGCTGGCCATCATGGGGCCTTCTG GATGTGGCAAAACTACTCTTCTCAACGCTCTTGCAGGCCGCCTTGGCACCGCAACGGTTG ACTCCGGGGAGATTCTCGCCAATGGCCGACGACAAAGTTTATCATATGGCAACTCTGCCT ATGTAACTCAGGACGACTCTCTCATCGCGACATTGACCACATATGAGACACTGGTATATT CGGCCCATCTACAGCTTCCTGAGAGCATGACCTCCTTTGAGAAGCAGCGAAGAGTGCAAA ATACTATTCGAGAAATGGGTCTGCAAGAATGTGCGGATACACCAGTGGGTGGTTGGTATA TCCGAGGGTTGAGTGGGGGGGGCAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8RXN0 |
Definition |
sp|Q8RXN0|WBC11_ARATH White-brown complex homolog protein 11 OS=Arabidopsis thaliana |
Align length |
177 |
Score (bit) |
169.0 |
E-value |
9.0e-42 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7R4M9 |
Definition |
tr|A7R4M9|A7R4M9_VITVI Chromosome undetermined scaffold_744, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
158 |
Score (bit) |
186.0 |
E-value |
6.0e-46 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953397|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_K15, 5' (566 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7R4M9|A7R4M9_VITVI Chromosome undetermined scaffold_744, who... 186 6e-46 tr|A7QT48|A7QT48_VITVI Chromosome undetermined scaffold_165, who... 182 8e-45 tr|A7QT46|A7QT46_VITVI Chromosome undetermined scaffold_165, who... 180 6e-44 tr|A5B907|A5B907_VITVI Putative uncharacterized protein OS=Vitis... 180 6e-44 tr|A7PAW2|A7PAW2_VITVI Chromosome chr16 scaffold_10, whole genom... 171 3e-41 tr|A5AQG4|A5AQG4_VITVI Putative uncharacterized protein OS=Vitis... 171 3e-41 tr|Q2QT07|Q2QT07_ORYSJ Os12g0411700 protein OS=Oryza sativa subs... 170 4e-41 tr|A7QT42|A7QT42_VITVI Chromosome undetermined scaffold_165, who... 170 6e-41 tr|A5B6D6|A5B6D6_VITVI Putative uncharacterized protein OS=Vitis... 170 6e-41 tr|Q7XUM2|Q7XUM2_ORYSJ OSJNBa0074L08.3 protein OS=Oryza sativa s... 169 7e-41 tr|Q6K4D2|Q6K4D2_ORYSJ Os09g0472100 protein OS=Oryza sativa subs... 169 7e-41 tr|Q0JBJ8|Q0JBJ8_ORYSJ Os04g0528300 protein OS=Oryza sativa subs... 169 7e-41 tr|Q01HN4|Q01HN4_ORYSA OSIGBa0115K01-H0319F09.18 protein OS=Oryz... 169 7e-41 tr|B8BCP6|B8BCP6_ORYSI Putative uncharacterized protein OS=Oryza... 169 7e-41 tr|A7R4N0|A7R4N0_VITVI Chromosome undetermined scaffold_744, who... 169 7e-41 tr|A7QT44|A7QT44_VITVI Chromosome undetermined scaffold_165, who... 169 7e-41 tr|A5C3S6|A5C3S6_VITVI Putative uncharacterized protein OS=Vitis... 169 7e-41 tr|A3BZU2|A3BZU2_ORYSJ Putative uncharacterized protein OS=Oryza... 169 7e-41 tr|A3AVS2|A3AVS2_ORYSJ Putative uncharacterized protein OS=Oryza... 169 7e-41 tr|A2XVR4|A2XVR4_ORYSI Putative uncharacterized protein OS=Oryza... 169 7e-41 tr|Q3ZDP9|Q3ZDP9_ARAGE White-brown complex protein 11 (Fragment)... 169 1e-40 tr|B6SL34|B6SL34_MAIZE ATP-binding cassette sub-family G member ... 169 1e-40 tr|Q7XI02|Q7XI02_ORYSJ ABC transporter family protein-like OS=Or... 168 2e-40 tr|Q7EY81|Q7EY81_ORYSJ Os07g0288700 protein OS=Oryza sativa subs... 168 2e-40 tr|B8B578|B8B578_ORYSI Putative uncharacterized protein OS=Oryza... 168 2e-40 tr|A5BIV5|A5BIV5_VITVI Putative uncharacterized protein OS=Vitis... 167 3e-40 tr|Q6K4D1|Q6K4D1_ORYSJ Os09g0472200 protein OS=Oryza sativa subs... 167 4e-40 tr|B6SVU3|B6SVU3_MAIZE ABC transporter C05D10.3 in chromosome II... 167 4e-40 tr|A3BZU3|A3BZU3_ORYSJ Putative uncharacterized protein OS=Oryza... 167 4e-40 tr|A2Z298|A2Z298_ORYSI Putative uncharacterized protein OS=Oryza... 167 4e-40
>tr|A7R4M9|A7R4M9_VITVI Chromosome undetermined scaffold_744, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004588001 PE=3 SV=1 Length = 891
Score = 186 bits (473), Expect = 6e-46 Identities = 95/158 (60%), Positives = 119/158 (75%) Frame = +3
Query: 87 TSSSKSIFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLN 266 TS S +FLTWKDL V VP S +P +LQ ++GYA+PG +LAIMGPSGCGK+TLL+ Sbjct: 261 TSKSNGVFLTWKDLWVTVPDQQSGRRP---ILQRLTGYAQPGEVLAIMGPSGCGKSTLLD 317
Query: 267 ALAGRLGTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPES 446 ALAGRLG+ T +GEIL NGR+Q L++G SAYVTQDD+L+ TLT E + YSA LQLP S Sbjct: 318 ALAGRLGSNTRQAGEILINGRKQRLAFGTSAYVTQDDTLMTTLTVREAVHYSAQLQLPGS 377
Query: 447 MTSFEKQRRVQNTIREMGLQECADTPVGGWYIRGLSGG 560 M + K+ R + TI EMGLQ+C +T +GGW +GLSGG Sbjct: 378 MPTSAKKERAEMTICEMGLQDCIETRIGGWGKKGLSGG 415
>tr|A7QT48|A7QT48_VITVI Chromosome undetermined scaffold_165, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006163001 PE=3 SV=1 Length = 676
Score = 182 bits (463), Expect = 8e-45 Identities = 93/152 (61%), Positives = 115/152 (75%) Frame = +3
Query: 105 IFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRL 284 +FLTW+DL V V G S R +LQ ++GYA PG +LAIMGPSGCGK+TLL+ALAGRL Sbjct: 45 VFLTWEDLWVTVSNGKSG---CRSILQGLTGYARPGEVLAIMGPSGCGKSTLLDALAGRL 101
Query: 285 GTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEK 464 G+ T SG IL NG +Q+LSYG SAYVTQDD+LI TLT E + YSA LQLP+SM+ EK Sbjct: 102 GSNTSQSGIILVNGHKQALSYGTSAYVTQDDTLITTLTVGEAVYYSALLQLPDSMSKSEK 161
Query: 465 QRRVQNTIREMGLQECADTPVGGWYIRGLSGG 560 + R TIREMGLQ+ +T +GGW ++G+SGG Sbjct: 162 KERADMTIREMGLQDSINTRIGGWGVKGISGG 193
>tr|A7QT46|A7QT46_VITVI Chromosome undetermined scaffold_165, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006161001 PE=3 SV=1 Length = 653
Score = 180 bits (456), Expect = 6e-44 Identities = 91/152 (59%), Positives = 116/152 (76%) Frame = +3
Query: 105 IFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRL 284 IFLTW+DLSV + G G +R LLQ ++G+A PG +LAIMGPSGCGK+TLL+ALAGRL Sbjct: 22 IFLTWEDLSVTA-SNGKGG--SRLLLQGLTGFARPGEVLAIMGPSGCGKSTLLDALAGRL 78
Query: 285 GTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEK 464 G+ SG +L NG +Q+L+YG SAYVTQDD+LI TLT E + YSA LQLP+SM+ EK Sbjct: 79 GSNISQSGMVLVNGHQQTLAYGTSAYVTQDDTLITTLTVGEAVCYSALLQLPDSMSKSEK 138
Query: 465 QRRVQNTIREMGLQECADTPVGGWYIRGLSGG 560 + R TIREMGLQ+ +T +GGW ++G+SGG Sbjct: 139 KERADMTIREMGLQDAVNTRIGGWGVKGISGG 170
>tr|A5B907|A5B907_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013416 PE=3 SV=1 Length = 658
Score = 180 bits (456), Expect = 6e-44 Identities = 91/152 (59%), Positives = 116/152 (76%) Frame = +3
Query: 105 IFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRL 284 IFLTW+DLSV + G G +R LLQ ++G+A PG +LAIMGPSGCGK+TLL+ALAGRL Sbjct: 56 IFLTWEDLSVTA-SNGKGG--SRLLLQGLTGFARPGEVLAIMGPSGCGKSTLLDALAGRL 112
Query: 285 GTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEK 464 G+ SG +L NG +Q+L+YG SAYVTQDD+LI TLT E + YSA LQLP+SM+ EK Sbjct: 113 GSNISQSGMVLVNGHQQTLAYGTSAYVTQDDTLITTLTVGEAVYYSALLQLPDSMSKSEK 172
Query: 465 QRRVQNTIREMGLQECADTPVGGWYIRGLSGG 560 + R TIREMGLQ+ +T +GGW ++G+SGG Sbjct: 173 KERADMTIREMGLQDAVNTRIGGWGVKGISGG 204
>tr|A7PAW2|A7PAW2_VITVI Chromosome chr16 scaffold_10, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013847001 PE=3 SV=1 Length = 697
Score = 171 bits (433), Expect = 3e-41 Identities = 93/177 (52%), Positives = 121/177 (68%) Frame = +3
Query: 30 LSQAELQSLTDTEFWMVMDTSSSKSIFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEP 209 LS+ + TDTEF V D S+ LTWKDL+V V Q +L+ ++GYAEP Sbjct: 22 LSETLWKERTDTEF--VGDVSAR----LTWKDLTVMVTLSNGETQK---VLEGLTGYAEP 72
Query: 210 GSLLAIMGPSGCGKTTLLNALAGRLGTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIA 389 G+ A+MGPSG GK+TLL+AL+ RL SG IL NGR+ LS+G +AYVTQDD+LI Sbjct: 73 GTFTALMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGRKTKLSFGTAAYVTQDDNLIG 132
Query: 390 TLTTYETLVYSAHLQLPESMTSFEKQRRVQNTIREMGLQECADTPVGGWYIRGLSGG 560 TLT ET+ YSA L+LP+ M EK+ V++TI EMGLQ+CADT +G W++RG+SGG Sbjct: 133 TLTVRETISYSARLRLPDKMRWSEKRALVESTIIEMGLQDCADTVIGNWHLRGISGG 189
>tr|A5AQG4|A5AQG4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006943 PE=3 SV=1 Length = 716
Score = 171 bits (433), Expect = 3e-41 Identities = 93/177 (52%), Positives = 121/177 (68%) Frame = +3
Query: 30 LSQAELQSLTDTEFWMVMDTSSSKSIFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEP 209 LS+ + TDTEF V D S+ LTWKDL+V V Q +L+ ++GYAEP Sbjct: 30 LSETLWKERTDTEF--VGDVSAR----LTWKDLTVMVTLSNGETQK---VLEGLTGYAEP 80
Query: 210 GSLLAIMGPSGCGKTTLLNALAGRLGTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIA 389 G+ A+MGPSG GK+TLL+AL+ RL SG IL NGR+ LS+G +AYVTQDD+LI Sbjct: 81 GTFTALMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGRKTKLSFGTAAYVTQDDNLIG 140
Query: 390 TLTTYETLVYSAHLQLPESMTSFEKQRRVQNTIREMGLQECADTPVGGWYIRGLSGG 560 TLT ET+ YSA L+LP+ M EK+ V++TI EMGLQ+CADT +G W++RG+SGG Sbjct: 141 TLTVRETISYSARLRLPDKMRWSEKRALVESTIIEMGLQDCADTVIGNWHLRGISGG 197
>tr|Q2QT07|Q2QT07_ORYSJ Os12g0411700 protein OS=Oryza sativa subsp. japonica GN=Os12g0411700 PE=2 SV=2 Length = 713
Score = 170 bits (431), Expect = 4e-41 Identities = 83/161 (51%), Positives = 113/161 (70%) Frame = +3
Query: 84 DTSSSKSIFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLL 263 D ++FLTW+D+ V VP G + G P +L ++G+A PG +LAIMGPSGCGKTTLL Sbjct: 95 DVVDDPAVFLTWEDVRVTVP-GRTRGSPPARILDGITGHARPGEVLAIMGPSGCGKTTLL 153
Query: 264 NALAGRLGTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPE 443 + LAGRLG +G IL NGR++ L++G SAYVTQD+ L++TL+ E + YSAHLQLP+ Sbjct: 154 DTLAGRLGQEMNQTGVILINGRQEKLAFGTSAYVTQDNVLMSTLSVREAVYYSAHLQLPD 213
Query: 444 SMTSFEKQRRVQNTIREMGLQECADTPVGGWYIRGLSGGGR 566 +M + EK+ + IREMGL + DT +GG +G+SGG R Sbjct: 214 TMLASEKRAHAERVIREMGLSDTMDTRIGGRITKGISGGQR 254
>tr|A7QT42|A7QT42_VITVI Chromosome undetermined scaffold_165, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006157001 PE=3 SV=1 Length = 637
Score = 170 bits (430), Expect = 6e-41 Identities = 86/152 (56%), Positives = 113/152 (74%) Frame = +3
Query: 105 IFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRL 284 +++TWK+LSV V G ++++LQ ++GYA+P +LAIMGPSG GK+TLL+ALAGRL Sbjct: 24 VYVTWKELSVTVSNG------SKFILQGLTGYAQPSQVLAIMGPSGSGKSTLLDALAGRL 77
Query: 285 GTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEK 464 + T +GEIL NGR+Q +YG AYVTQDD+L TLT E + YSA LQLP+SM+ EK Sbjct: 78 DSRTRHTGEILINGRKQWSAYGTMAYVTQDDTLTWTLTVREAVFYSAQLQLPKSMSISEK 137
Query: 465 QRRVQNTIREMGLQECADTPVGGWYIRGLSGG 560 + R + TIREMGLQ+ DT +GGW +GLSGG Sbjct: 138 KERSETTIREMGLQDSMDTRIGGWGSKGLSGG 169
>tr|A5B6D6|A5B6D6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012972 PE=3 SV=1 Length = 691
Score = 170 bits (430), Expect = 6e-41 Identities = 92/169 (54%), Positives = 115/169 (68%), Gaps = 17/169 (10%) Frame = +3
Query: 105 IFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAG-- 278 +FLTW+DL V V G S +R +LQ ++GYA PG +LAIMGPSGCGK+TLL+ALAG Sbjct: 45 VFLTWEDLWVTVSNGKSG---SRSILQGLTGYARPGEVLAIMGPSGCGKSTLLDALAGAM 101
Query: 279 ---------------RLGTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETL 413 RLG+ T SG IL NG +Q+LSYG SAYVTQDD+LI TLT E + Sbjct: 102 NVESEATSVVPRINRRLGSNTSQSGIILVNGHKQALSYGTSAYVTQDDTLITTLTVGEAV 161
Query: 414 VYSAHLQLPESMTSFEKQRRVQNTIREMGLQECADTPVGGWYIRGLSGG 560 YSA LQLP+SM+ K+ R TIREMGLQ+ +T +GGW ++G+SGG Sbjct: 162 YYSALLQLPDSMSKSXKKERADMTIREMGLQDSINTRIGGWGVKGISGG 210
>tr|Q7XUM2|Q7XUM2_ORYSJ OSJNBa0074L08.3 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0074L08.3 PE=3 SV=1 Length = 692
Score = 169 bits (429), Expect = 7e-41 Identities = 87/150 (58%), Positives = 109/150 (72%) Frame = +3
Query: 111 LTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRLGT 290 LTWKDLSV V G Q +L ++GYAEPGSL A+MGPSG GK+TLL+ALAGRL Sbjct: 48 LTWKDLSVTVALGPGKTQT---VLDELTGYAEPGSLTALMGPSGSGKSTLLDALAGRLAA 104
Query: 291 ATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEKQR 470 SG +L NGR+ LS+G +AYVTQDD+LI TLT ET+ YSA L+LP+ M +K+ Sbjct: 105 NAFLSGNVLLNGRKAKLSFGAAAYVTQDDNLIGTLTVRETIGYSAMLRLPDKMPREDKRA 164
Query: 471 RVQNTIREMGLQECADTPVGGWYIRGLSGG 560 V+ TI EMGLQ+CADT +G W++RG+SGG Sbjct: 165 LVEGTIVEMGLQDCADTVIGNWHLRGVSGG 194
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