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NBDC - LSDB Archive
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DK953409
Clone id TST39A01NGRL0017_L03
Library
Length 557
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_L03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GATCAAAGTGAACACATAATCAAGAAAGGTAAGCAGGAAGGAAGCCGCAGTCATGGCAGC
AACAACTGCCTCCCTCTCCTCATCTGTCTTCAGCGGGCAGCAATTGAAGCCCGTCAATGA
GCTCTCTCGCAAGGTGGGAGCAGGTGAGGCCCGCGTTCAGATGATGGCCCCCAAGAAGTC
CTCATCTGGCAGCATCTGGTACGGTTCCGACCGCCCTCTCTACCTGGGCCCTTTCTCTGG
CTCTCCCCCATCCTACCTCACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACAGCTGG
TCTGTCCGCAGACCCAGAGACCTTCGCCAAGAACAGGGAGCTGGAGGTGATCCATTCCAG
ATGGGCCATGTTGGGAGCCTTGGGCTGTGTGACGCCCGAGCTGCTGGCAAAGAACGGTGT
CAAGTTTGGTGAGGCTGTGTGGTTCAAGGCTGGCTCCCAGATCTTCGCCGATGGCGGCCT
TGATTATCTTGGCAACCCGAGCCTTGTCCACGCTCAAAGCATTTTTGGCCATTTTGGGCC
TGCCAGGTCATCCTTAT
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 158
Score (bit) 297.0
E-value 2.0e-80
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953409|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_L03, 5'
         (557 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   297   2e-80
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   246   7e-65
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...   241   2e-63
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   241   2e-63
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   240   4e-63
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...   239   7e-63
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...   239   7e-63
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   238   1e-62
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   237   3e-62
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   236   4e-62
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   236   6e-62
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   236   6e-62
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   236   7e-62
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   235   1e-61
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   235   1e-61
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   235   1e-61
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   235   1e-61
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   235   1e-61
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro...   235   1e-61
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   234   2e-61
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   234   2e-61
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   234   2e-61
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   234   3e-61
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   233   4e-61
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   233   5e-61
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   232   8e-61
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   232   1e-60
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   232   1e-60
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   232   1e-60
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   232   1e-60

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  297 bits (761), Expect = 2e-80
 Identities = 147/158 (93%), Positives = 154/158 (97%), Gaps = 1/158 (0%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 229
           MA +TA+L+S+ FSGQQLKPVNELSRKVGAGEARVQMMAPK K+ SGSIWYGSDRPLYLG
Sbjct: 1   MATSTAALTST-FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLG 59

Query: 230 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 409
           PFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA
Sbjct: 60  PFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 119

Query: 410 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           KNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSI
Sbjct: 120 KNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSI 157


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  246 bits (627), Expect = 7e-65
 Identities = 121/154 (78%), Positives = 128/154 (83%), Gaps = 1/154 (0%)
 Frame = +2

Query: 65  TASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSG 241
           T+++  S F+GQ L KP NEL RKVG    RV M    KS+  SIWYG DRP YLGPFS 
Sbjct: 3   TSTIQQSAFAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSE 62

Query: 242 SPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGV 421
             PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGV
Sbjct: 63  QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGV 122

Query: 422 KFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           KFGEAVWFKAGSQIF +GGLDYLGNP+LVHAQSI
Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSI 156


>sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2,
           chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1
          Length = 267

 Score =  241 bits (615), Expect = 2e-63
 Identities = 119/158 (75%), Positives = 131/158 (82%), Gaps = 1/158 (0%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 229
           MAA+T +LSS  F+G+ +K     S  +G+G   ++    K K  SGS WYGSDR  YLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 230 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 409
           PFSG  PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCV PELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 410 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           +NGVKFGEAVWFKAGSQIF+DGGLDYLGNPSLVHAQSI
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSI 158


>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
           OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
          Length = 266

 Score =  241 bits (615), Expect = 2e-63
 Identities = 124/161 (77%), Positives = 130/161 (80%), Gaps = 4/161 (2%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAP----KKSSSGSIWYGSDRPL 220
           MAATT SLSSS F+G   K V  L      G+ARV M       K+ SS S WYGSDR L
Sbjct: 1   MAATTMSLSSSSFAG---KAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVL 57

Query: 221 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 400
           YLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 58  YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117

Query: 401 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           LLA+NGVKFGEA WFKAGSQIF+DGGLDYLGNPSLVHAQS+
Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSL 158


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  240 bits (612), Expect = 4e-63
 Identities = 120/160 (75%), Positives = 135/160 (84%), Gaps = 3/160 (1%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKV-GAGEARVQMMAPKKSSSGS--IWYGSDRPLY 223
           MAA TA  S+++     +KPVNELSRKV G  EARV M      S+GS  IWYG+DRP +
Sbjct: 1   MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60

Query: 224 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 403
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 404 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSI
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 160



 Score = 31.2 bits (69), Expect = 3.6
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +2

Query: 236 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 415
           +G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 416 G 418
           G
Sbjct: 240 G 240


>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1,
           chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1
          Length = 266

 Score =  239 bits (610), Expect = 7e-63
 Identities = 116/157 (73%), Positives = 127/157 (80%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 232
           MAA+T +LSS  F+G+ +K     S   G G   ++        SGS WYGSDR  YLGP
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 60

Query: 233 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 412
           FSG PPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PELLA+
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 413 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSI
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSI 157


>sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180,
           chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1
           SV=1
          Length = 267

 Score =  239 bits (610), Expect = 7e-63
 Identities = 118/158 (74%), Positives = 130/158 (82%), Gaps = 1/158 (0%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 229
           MAA+T +LSS  F+G+ +      S  +G+G   ++    K K  SGS WYGSDR  YLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 230 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 409
           PFSG  PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCV PELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 410 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           +NGVKFGEAVWFKAGSQIF+DGGLDYLGNPSLVHAQSI
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSI 158


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  238 bits (608), Expect = 1e-62
 Identities = 120/162 (74%), Positives = 133/162 (82%), Gaps = 5/162 (3%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM-----APKKSSSGSIWYGSDRP 217
           MA++T +LSS+ F+G+ +   + L      GEARV M      A   +SSGS WYG DR 
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSLF-----GEARVTMRKTAAKAKPAASSGSPWYGPDRV 55

Query: 218 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 397
           LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P
Sbjct: 56  LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115

Query: 398 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           ELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSI
Sbjct: 116 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSI 157


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  237 bits (604), Expect = 3e-62
 Identities = 117/155 (75%), Positives = 129/155 (83%), Gaps = 2/155 (1%)
 Frame = +2

Query: 65  TASLSSSVFSGQQ-LKPVNELSRKVGA-GEARVQMMAPKKSSSGSIWYGSDRPLYLGPFS 238
           T+++  S F+GQ  LK  NEL  K+GA G  RV M    KS+  SIWYG DRP YLGPFS
Sbjct: 3   TSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFS 62

Query: 239 GSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNG 418
              PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNG
Sbjct: 63  DQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNG 122

Query: 419 VKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           VKFGEAVWFKAGSQIF++GGLDYLGNP+L+HAQSI
Sbjct: 123 VKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSI 157


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  236 bits (603), Expect = 4e-62
 Identities = 118/159 (74%), Positives = 129/159 (81%), Gaps = 2/159 (1%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKK--SSSGSIWYGSDRPLYL 226
           MA +T +LSSS F+G+ +K     S   G G   ++  A K   +SSGS WYG DR  YL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 227 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 406
           GPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 407 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSI
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSI 159
tr_hit_id Q5CCK8
Definition tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum capillus-veneris
Align length 164
Score (bit) 296.0
E-value 5.0e-79
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953409|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_L03, 5'
         (557 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   296   5e-79
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   257   3e-67
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   254   2e-66
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   253   5e-66
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   251   2e-65
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   250   4e-65
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   250   4e-65
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   249   5e-65
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   249   5e-65
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   249   5e-65
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   246   8e-64
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   245   1e-63
tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T...   244   3e-63
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   243   5e-63
tr|Q39141|Q39141_ARATH Photosystem II type I chlorophyll a /b bi...   243   5e-63
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin...   242   9e-63
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   242   9e-63
tr|Q1KLZ3|Q1KLZ3_9ROSI Putative chloroplast chlorophyll a/b-bind...   242   1e-62
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   241   2e-62
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   241   2e-62
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   241   2e-62
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   241   2e-62
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten...   241   2e-62
tr|Q39142|Q39142_ARATH Photosystem II type I chlorophyll a /b bi...   241   3e-62
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   241   3e-62
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   241   3e-62
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   241   3e-62
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   240   3e-62
tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote...   240   3e-62
tr|Q8W159|Q8W159_BRAOL Chlorophyll a/b binding protein OS=Brassi...   239   7e-62

>tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum
           capillus-veneris GN=AcCab1 PE=4 SV=1
          Length = 215

 Score =  296 bits (758), Expect = 5e-79
 Identities = 150/164 (91%), Positives = 152/164 (92%), Gaps = 7/164 (4%)
 Frame = +2

Query: 53  MAATT-------ASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSD 211
           MAATT       A LSSSVFSGQQLKPVNELSRKVG  EARVQMMAPKKSSSG+I YG+D
Sbjct: 1   MAATTTFLSSVVAFLSSSVFSGQQLKPVNELSRKVGTSEARVQMMAPKKSSSGNIRYGAD 60

Query: 212 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 391
           R LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 61  RLLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 120

Query: 392 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI
Sbjct: 121 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 164


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  257 bits (657), Expect = 3e-67
 Identities = 124/157 (78%), Positives = 138/157 (87%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 232
           MAA TA  S+++     LKPVNELSRKVG+ EARV M    KS+S SIWYG+DRP YLGP
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGP 60

Query: 233 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 412
           FSG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK
Sbjct: 61  FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 120

Query: 413 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSI
Sbjct: 121 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 157


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  254 bits (649), Expect = 2e-66
 Identities = 123/157 (78%), Positives = 134/157 (85%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 232
           MAA TA  S+++     LKPVNELSRKVG  EAR+ M      SS SIWYG+DRP YLGP
Sbjct: 1   MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGP 60

Query: 233 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 412
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 61  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 120

Query: 413 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSI
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 157


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  253 bits (646), Expect = 5e-66
 Identities = 124/157 (78%), Positives = 135/157 (85%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 232
           MAA TA  S+++     LKPVNELSRKVG  EARV M   K S S SIWYG+DRP +LGP
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR--KSSGSDSIWYGADRPKFLGP 58

Query: 233 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 412
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 59  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 413 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSI
Sbjct: 119 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 155


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  251 bits (641), Expect = 2e-65
 Identities = 124/159 (77%), Positives = 137/159 (86%), Gaps = 2/159 (1%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 226
           MAA TA  S+++     LKPVNELSRKVG  EARV M   A K ++S SIWYG+DRP YL
Sbjct: 1   MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYL 60

Query: 227 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 406
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 407 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSI
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 159


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  250 bits (638), Expect = 4e-65
 Identities = 122/159 (76%), Positives = 136/159 (85%), Gaps = 2/159 (1%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGS--IWYGSDRPLYL 226
           MAA TA  S+++     LKPVNELSRKVG+ +ARV M      S+GS  IWYG+DRP YL
Sbjct: 1   MAACTACASTALAGQSLLKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYL 60

Query: 227 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 406
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 407 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSI
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 159


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
          Length = 263

 Score =  250 bits (638), Expect = 4e-65
 Identities = 124/157 (78%), Positives = 136/157 (86%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 232
           MAA TA+ S+++     LK +NELSRKVG  +ARV M   K SSS SIWYG+DRP YLGP
Sbjct: 1   MAACTATHSTALAGQTALKSINELSRKVGNVQARVTMR--KASSSDSIWYGADRPKYLGP 58

Query: 233 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 412
            SG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 59  LSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 413 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSI
Sbjct: 119 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSI 155


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  249 bits (637), Expect = 5e-65
 Identities = 122/160 (76%), Positives = 138/160 (86%), Gaps = 3/160 (1%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 223
           MA    +++S+V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +
Sbjct: 1   MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 224 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 403
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 404 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSI
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 160


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
          Length = 263

 Score =  249 bits (637), Expect = 5e-65
 Identities = 121/157 (77%), Positives = 136/157 (86%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 232
           MAA TA  S+++     LKPVNELSR+VGA EARV M   K + S SIWYG+DRP +LGP
Sbjct: 1   MAAATACASTALAGQSLLKPVNELSRRVGANEARVTMR--KSAGSDSIWYGADRPKFLGP 58

Query: 233 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 412
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK
Sbjct: 59  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 118

Query: 413 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSI
Sbjct: 119 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 155


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  249 bits (637), Expect = 5e-65
 Identities = 122/160 (76%), Positives = 138/160 (86%), Gaps = 3/160 (1%)
 Frame = +2

Query: 53  MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 223
           MA    +++S+V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +
Sbjct: 1   MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 224 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 403
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 404 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSI 523
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSI
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 160