DK953414 |
Clone id |
TST39A01NGRL0017_L08 |
Library |
TST39 |
Length |
532 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_L08. 5' end sequence. |
Accession |
DK953414 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL133Contig1 |
Sequence |
CGGAGAGCTTCGGCTCTCTTCTTTCTGCTCCACCTCCGGAGCATATCCCCTTCCATTGCC GTATCAGTCTCAGCATGGAGAGGGATCTTGCTCTTGGGTGTTCCCAAACTTTGAACACAG CGGTAGTGAGGGCATCTCACCTTCAGAATGCAAGTCGACAGGCTGTTCCATCTCGGCTTC AGTGGAAGCAGAGTTCAATTGGAAATGCTTTCCAGAAGTCACGGTGGCTGATGCCCAGAG TAGGGAAGACGAGTCTCCGGCACTGTGTTGTGAAATCGGACATGACAGCTAGTGCTGCTA CAGCACCTGCTGCCCCACTGTTACTCGAAACACCAAGCGGGCAATTTCTAGCGGAGTTGT TGCAAAGTCATCCTTACCTTGTGTGTGCAGCAGCAGAGCAGCAGCTCGAAACGTTAGCGG AGGCTAGAGACGCAGCAGCCACAAGTCAAGAGCAATCGAGTCCCATGGGCACTGAGATGA TTCTTTACAAACGTATAGCAGAGCTTAAAGCACAGGAAAGGTGCAAGGCATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8TER5 |
Definition |
sp|Q8TER5|SOLO_HUMAN Protein SOLO OS=Homo sapiens |
Align length |
76 |
Score (bit) |
37.0 |
E-value |
0.06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7X9D6 |
Definition |
tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia |
Align length |
147 |
Score (bit) |
58.9 |
E-value |
2.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953414|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_L08, 5' (532 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia ... 59 2e-07 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 56 1e-06 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 56 1e-06 tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 55 2e-06 tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 54 5e-06 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 52 2e-05 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 52 2e-05 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 52 2e-05 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 51 3e-05 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 51 3e-05 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 49 1e-04 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 49 1e-04 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 47 8e-04 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 45 0.002 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 45 0.002 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 44 0.005 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 44 0.005 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.005 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.005 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 41 0.033 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.056 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.074 tr|B6L7U9|B6L7U9_BRAFL Putative uncharacterized protein OS=Branc... 39 0.17 tr|B8LKC1|B8LKC1_PICSI Putative uncharacterized protein OS=Picea... 37 0.48 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.62 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 37 0.62 tr|Q86TR4|Q86TR4_HUMAN Full-length cDNA 5-PRIME end of clone CS0... 37 0.63 tr|B8FK31|B8FK31_9DELT Flagellar biosynthesis protein FlhA OS=De... 34 5.3 tr|A9Q6H1|A9Q6H1_CANFA Trefoil factor family peptide 1 OS=Canis ... 33 9.2 tr|A4FUH6|A4FUH6_BOVIN TFF2 protein OS=Bos taurus GN=TFF2 PE=2 SV=1 33 9.2
>tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia PE=2 SV=1 Length = 176
Score = 58.9 bits (141), Expect = 2e-07 Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 7/147 (4%) Frame = +3
Query: 75 MERDLALGCSQTLNTAVVRAS--HLQNASRQAV-----PSRLQWKQSSIGNAFQKSRWLM 233 ME LA+ + LNTA V + H A+RQAV PSR Q G + +S Sbjct: 31 MESGLAIAGFKGLNTAAVGSVSWHSHGATRQAVGSSSWPSRKQGLNVK-GTSLDRSWHDA 89
Query: 234 PRVGKTSLRHCVVKSDMXXXXXXXXXXXXXXXXXXGQFLAELLQSHPYLVCXXXXXXXXX 413 V + ++M GQFL ELLQSHP+LV Sbjct: 90 STVSNRRKTRLTINAEMTASASTTPLAPLIPESPSGQFLTELLQSHPHLVPAAAEQQLET 149
Query: 414 XXXXRDAAATSQEQSSPMGTEMILYKR 494 R+AA+ SQEQ +P G E++LYKR Sbjct: 150 LAEAREAAS-SQEQPTPDGNELVLYKR 175
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 56.2 bits (134), Expect = 1e-06 Identities = 28/64 (43%), Positives = 42/64 (65%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RDA S++ SS +GT+++LY+RIAE+K +E Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQSKDASSVLGTDIVLYRRIAEVKEKE 152
Query: 519 RCKA 530 R +A Sbjct: 153 RRRA 156
>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1 Length = 342
Score = 56.2 bits (134), Expect = 1e-06 Identities = 28/64 (43%), Positives = 42/64 (65%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RDA S++ SS +GT+++LY+RIAE+K +E Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQSKDASSVLGTDIVLYRRIAEVKEKE 152
Query: 519 RCKA 530 R +A Sbjct: 153 RRRA 156
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 55.5 bits (132), Expect = 2e-06 Identities = 31/64 (48%), Positives = 41/64 (64%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RDA +E+SS GTE++LY+RIAE+KA E Sbjct: 36 GQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEE-HKEESSASGTELVLYRRIAEVKANE 94
Query: 519 RCKA 530 R KA Sbjct: 95 RKKA 98
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 53.9 bits (128), Expect = 5e-06 Identities = 30/64 (46%), Positives = 40/64 (62%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL++LL+ HP+L+ RDAAA Q+ S TE++LY+RIAE+KA E Sbjct: 104 GQFLSQLLKDHPHLLPAAVEQQLERLVADRDAAA-QQDPPSSTSTELVLYRRIAEVKAAE 162
Query: 519 RCKA 530 R KA Sbjct: 163 RRKA 166
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 51.6 bits (122), Expect = 2e-05 Identities = 25/61 (40%), Positives = 38/61 (62%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK E Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 519 R 521 R Sbjct: 162 R 162
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 51.6 bits (122), Expect = 2e-05 Identities = 25/61 (40%), Positives = 38/61 (62%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK E Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 519 R 521 R Sbjct: 162 R 162
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 51.6 bits (122), Expect = 2e-05 Identities = 25/61 (40%), Positives = 38/61 (62%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK E Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 519 R 521 R Sbjct: 162 R 162
>tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022976001 PE=4 SV=1 Length = 342
Score = 51.2 bits (121), Expect = 3e-05 Identities = 30/64 (46%), Positives = 38/64 (59%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 G+FL E+L SHP+LV RDA QE SS G E++LY+RIA++KA E Sbjct: 38 GRFLTEILISHPHLVPAAVERQLEQFQTDRDAEGHKQE-SSASGIELLLYRRIAKVKANE 96
Query: 519 RCKA 530 R KA Sbjct: 97 RKKA 100
>tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030635 PE=4 SV=1 Length = 411
Score = 51.2 bits (121), Expect = 3e-05 Identities = 30/64 (46%), Positives = 38/64 (59%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 G+FL E+L SHP+LV RDA QE SS G E++LY+RIA++KA E Sbjct: 84 GRFLTEILISHPHLVPAAVERQLEQFQTDRDAEGHKQE-SSASGIELLLYRRIAKVKANE 142
Query: 519 RCKA 530 R KA Sbjct: 143 RKKA 146
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