DK953427 |
Clone id |
TST39A01NGRL0017_L21 |
Library |
TST39 |
Length |
601 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_L21. 5' end sequence. |
Accession |
DK953427 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2208Contig1 |
Sequence |
GTCTCTCTAATGGAAGAAGCGCCACACAGTCCTTACCATAGCCGGAAAAGGAAGAAAAGG AAAAAGATGGATGTTTCCTTAGATTTTGTACCAGCAAAAGAAGGGCACGCCTGTCCATTT GTGGGCTATTTTCCCTCCGGCTTCGACCCCTTGCAGTTCAAACAAGAGCATGAAACACAG AGCGAGCAAGAGGATCCTGGCAGGTTGAAGGTGTCTGCTTACCAGAATACTGAGAAGTAC AAGACCAGACAGCACCAGGTCGTTGTTACCCCTCCTGATACGACTCTGGACTTTGTGGGC ACCAACTATCTTGGCGAGGGTGCAATGTGGCAACCTGGTAACTATGTTCTTGGCGTCTTT GACAAGGAGTCTCTTACATTGCAGCTCTTGCCTCTATCAGGAACCAAGGTGTTACGAATG GAGCCAAGAGTGCGTGGATTAGATTATGATGTTGACTCCTTATCAGGTGTTACAGATGTG GAAATGTCAAAGGAAATGATGCTTCAGAAACGAAATTTGTTAACAGCCACATTTGGAACT CATAAGAGCCGTATTAAGCAAAGCAGGTATGAGAGAAGTCGGGTGAAAGAAGAAGCTTTG G |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A8GFJ7 |
Definition |
sp|A8GFJ7|CMOA_SERP5 tRNA (cmo5U34)-methyltransferase OS=Serratia proteamaculans (strain 568) |
Align length |
49 |
Score (bit) |
33.5 |
E-value |
0.85 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LNA5 |
Definition |
tr|B8LNA5|B8LNA5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
191 |
Score (bit) |
181.0 |
E-value |
4.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953427|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_L21, 5' (601 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LNA5|B8LNA5_PICSI Putative uncharacterized protein OS=Picea... 181 4e-44 tr|A9TFR8|A9TFR8_PHYPA Predicted protein OS=Physcomitrella paten... 149 9e-35 tr|A7P6N8|A7P6N8_VITVI Chromosome chr9 scaffold_7, whole genome ... 120 8e-26 tr|B7FK61|B7FK61_MEDTR Putative uncharacterized protein OS=Medic... 107 4e-22 tr|Q9LVK6|Q9LVK6_ARATH Arabidopsis thaliana genomic DNA, chromos... 96 1e-18 tr|B6TU28|B6TU28_MAIZE A49-like RNA polymerase I associated fact... 75 2e-12 tr|A2XC85|A2XC85_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|Q2R177|Q2R177_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 63 1e-08 tr|A3CDD1|A3CDD1_ORYSJ Putative uncharacterized protein OS=Oryza... 56 2e-06 tr|Q5AD50|Q5AD50_CANAL Putative uncharacterized protein RPA49 OS... 39 0.23 tr|B4KV66|B4KV66_DROMO GI11539 OS=Drosophila mojavensis GN=GI115... 39 0.30 tr|B2QC07|B2QC07_9BACL DNA topoisomerase IV, A subunit OS=Exiguo... 37 0.88 tr|Q0C306|Q0C306_HYPNA MaoC family protein OS=Hyphomonas neptuni... 36 1.5 tr|A3Y1R3|A3Y1R3_9VIBR ATP-dependent RNA helicase, DEAD box fami... 36 2.0 tr|B4L900|B4L900_DROMO GI16753 OS=Drosophila mojavensis GN=GI167... 36 2.0 tr|B1HS67|B1HS67_LYSSC Hypothetical yaaO protein OS=Lysinibacill... 35 2.6 tr|B7VMP7|B7VMP7_VIBSP Putative ATP-dependent RNA helicase OS=Vi... 35 2.6 tr|A3IDG2|A3IDG2_9BACI Lysine decarboxylase OS=Bacillus sp. B149... 35 2.6 tr|A8JCV4|A8JCV4_CHLRE Predicted protein (Fragment) OS=Chlamydom... 35 2.6 tr|Q0UGR2|Q0UGR2_PHANO Putative uncharacterized protein OS=Phaeo... 35 2.6 tr|B4MUM6|B4MUM6_DROWI GK14775 OS=Drosophila willistoni GN=GK147... 35 3.4 tr|A0Y7Q0|A0Y7Q0_9GAMM Putative uncharacterized protein OS=marin... 35 4.4 tr|B8HXV8|B8HXV8_9CHRO Putative uncharacterized protein OS=Cyano... 34 5.6 tr|B3S9P6|B3S9P6_TRIAD Putative uncharacterized protein OS=Trich... 34 5.7 tr|Q8NIW4|Q8NIW4_NEUCR Putative uncharacterized protein 94C8.100... 34 5.7 tr|Q7S7U6|Q7S7U6_NEUCR Putative uncharacterized protein OS=Neuro... 34 5.7 tr|Q171V8|Q171V8_AEDAE Delta(9)-desaturase, putative (Fragment) ... 33 9.6 tr|Q4SMZ1|Q4SMZ1_TETNG DNA polymerase (Fragment) OS=Tetraodon ni... 33 9.8 tr|B4UZX9|B4UZX9_9ACTO Putative uncharacterized protein OS=Strep... 33 9.8 tr|B8MTX2|B8MTX2_9EURO Putative uncharacterized protein OS=Talar... 33 9.8
>tr|B8LNA5|B8LNA5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 443
Score = 181 bits (458), Expect = 4e-44 Identities = 89/191 (46%), Positives = 131/191 (68%), Gaps = 4/191 (2%) Frame = +1
Query: 40 SRKRKKRKKMDVSLDFVPAKEGHACPFVGYFPSGFDPLQFKQEHETQSEQEDPGRLKVSA 219 S K++KRK+ V +++ + G CPFVGYF SG+DPL+ + + L+V Sbjct: 7 SSKKRKRKRTLVQTEYIKPQSGFGCPFVGYFSSGYDPLK---------KGDASSSLEVGV 57
Query: 220 YQNTEKYKTRQHQVVVTPPDTTLDFVGTNYLGEGAMWQPGNYVLGVFDKESLTLQLLPLS 399 YQNT K+KT+Q ++V P + +DFVGTNY GE ++WQP NY++GVFDKE+ TL+L+P+S Sbjct: 58 YQNTRKFKTKQMELVARPKEANVDFVGTNYSGENSLWQPCNYLMGVFDKETSTLKLVPIS 117
Query: 400 GTKVLRMEPRVRGLDYDVDSLSGVTDVEMSKEMMLQKR----NLLTATFGTHKSRIKQSR 567 G ++ RME RV+G++Y +S V + E ++E+ + R LLTATFGTHKSR++ R Sbjct: 118 GGRIFRMEARVQGMEY----MSAVAEEENAEELTAENRQRQYQLLTATFGTHKSRLEAKR 173
Query: 568 YERSRVKEEAL 600 ++SR+KEEAL Sbjct: 174 RDKSRLKEEAL 184
>tr|A9TFR8|A9TFR8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169823 PE=4 SV=1 Length = 524
Score = 149 bits (377), Expect = 9e-35 Identities = 92/226 (40%), Positives = 120/226 (53%), Gaps = 34/226 (15%) Frame = +1
Query: 25 HSPYHSRKRKKRKKM---DVSLDFVPAKEGHACPFVGYFPSGFDPLQFKQEHETQSEQED 195 H +H +K+K K+ DV +D+VP+KEG A PFV YFP+GFDPL E Sbjct: 36 HHHHHKKKKKSASKVVEQDVRMDYVPSKEGRARPFVAYFPTGFDPLG-----EADHGDAA 90
Query: 196 PGRLKVSAYQNTEKYKTRQHQVVVTPPDTTLDFVGTNYLGEGAMWQPGNYVLGVFDKESL 375 V YQ +K K +Q Q+V + +DFVG NY GE A WQP +Y LGV+DKE Sbjct: 91 AALSSVKVYQGVDKLKAKQTQLVASTHGQ-VDFVGLNYAGEAAAWQPCSYALGVYDKEKG 149
Query: 376 TLQLLPLSGTK------------------------------VLRMEPRVRGLDYD-VDSL 462 TLQL+PL+G K +LRMEPRVRG+ Y+ D Sbjct: 150 TLQLVPLAGEKGIVDVVRKVRFGLVSGFMVYVGGSKTIGFDILRMEPRVRGMSYEWTDEE 209
Query: 463 SGVTDVEMSKEMMLQKRNLLTATFGTHKSRIKQSRYERSRVKEEAL 600 V D ++E L KR +L TFG+ KS+++ R ER VKE+AL Sbjct: 210 ERVED---TREQSLLKRRMLVETFGSQKSKMRAQRMERGIVKEDAL 252
>tr|A7P6N8|A7P6N8_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034143001 PE=4 SV=1 Length = 421
Score = 120 bits (300), Expect = 8e-26 Identities = 69/185 (37%), Positives = 105/185 (56%) Frame = +1
Query: 40 SRKRKKRKKMDVSLDFVPAKEGHACPFVGYFPSGFDPLQFKQEHETQSEQEDPGRLKVSA 219 ++KRKK+K ++V ++ V P VGYFPSGFDP H+ Q + DP V Sbjct: 18 TKKRKKKKHVNVKMEVVHEHPEKIPPLVGYFPSGFDP------HKPQDHESDPPPA-VKV 70
Query: 220 YQNTEKYKTRQHQVVVTPPDTTLDFVGTNYLGEGAMWQPGNYVLGVFDKESLTLQLLPLS 399 ++N K + + Q+VV+P D+ ++FVGT+Y GE A Q Y LGV DKE+ TL+++P++ Sbjct: 71 FRN--KARANRLQLVVSPNDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIA 128
Query: 400 GTKVLRMEPRVRGLDYDVDSLSGVTDVEMSKEMMLQKRNLLTATFGTHKSRIKQSRYERS 579 K+ R+EPRV G D VD S + E + E + LT +GT KS + + + Sbjct: 129 SNKIFRLEPRVGGSDASVDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQAL 188
Query: 580 RVKEE 594 K++ Sbjct: 189 NQKDD 193
>tr|B7FK61|B7FK61_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 428
Score = 107 bits (268), Expect = 4e-22 Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 3/199 (1%) Frame = +1
Query: 7 LMEEAPHSPYHSRKRKKRKKMDVSLDFVPAKEGHACPFVGYFPSGFDPLQFKQEHETQSE 186 ++ E P P H + K ++ V + PF+GYF SGFDP++ + Q Sbjct: 18 MVTEPPPEPVHEPVQAK-------IEVVSSDPSKMPPFIGYFTSGFDPVKSSSGTDVQ-- 68
Query: 187 QEDPGRLKVSAYQNTEKYKTRQHQVVVTPPDTTLDFVGTNYLGEG--AMWQPGNYVLGVF 360 Y+N +K + ++VV+P ++++FVGT+Y GE A P Y+LGVF Sbjct: 69 ----------VYRNKVMHK--RTELVVSPAGSSVEFVGTSYEGEAVAAARNPATYMLGVF 116
Query: 361 DKESLTLQLLPLSGTKVLRMEPRVRGLDYDVDSLSGVTDV-EMSKEMMLQKRNLLTATFG 537 DKES TL+++P+ G K+ R+EPRV+G++Y + + V EM+ E + +K+ A G Sbjct: 117 DKESQTLKIVPIGGNKIFRLEPRVKGVEYKEPPPTPIKMVEEMTAEQLAEKKRNTDAALG 176
Query: 538 THKSRIKQSRYERSRVKEE 594 T +S SR R EE Sbjct: 177 TKRSNKMHSRLADMRGDEE 195
>tr|Q9LVK6|Q9LVK6_ARATH Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC16 (Putative uncharacterized protein At3g13940) OS=Arabidopsis thaliana GN=At3g13940 PE=2 SV=1 Length = 442
Score = 96.3 bits (238), Expect = 1e-18 Identities = 56/180 (31%), Positives = 99/180 (55%), Gaps = 5/180 (2%) Frame = +1
Query: 46 KRKKRKKMDVSLDFVPAKEGHACPFVGYFPSGFDPLQF-----KQEHETQSEQEDPGRLK 210 + ++ K++ + + V + P V YF +G+DP + K+ HET K Sbjct: 39 ENEEDKRVTLKVTQVAERPDRISPIVAYFSTGYDPCKVDPKTGKRVHETP---------K 89
Query: 211 VSAYQNTEKYKTRQHQVVVTPPDTTLDFVGTNYLGEGAMWQPGNYVLGVFDKESLTLQLL 390 V+ Y++ + K R QVVV+PP ++FVGTNY GE A Q Y +GVF++E+ TL++L Sbjct: 90 VTVYKHKDDSKKRI-QVVVSPPGARVEFVGTNYTGEQAAMQTNTYRVGVFNREAKTLRIL 148
Query: 391 PLSGTKVLRMEPRVRGLDYDVDSLSGVTDVEMSKEMMLQKRNLLTATFGTHKSRIKQSRY 570 P++ K++R+EPRV+ + + + SG V+ +E+ +R+ + + K++ Y Sbjct: 149 PVAHNKIIRLEPRVKAQETNEEEASGSAVVKELEELKTGERDRYNTKKAVTRDKKKRALY 208
>tr|B6TU28|B6TU28_MAIZE A49-like RNA polymerase I associated factor family protein OS=Zea mays PE=2 SV=1 Length = 442
Score = 75.5 bits (184), Expect = 2e-12 Identities = 54/158 (34%), Positives = 77/158 (48%), Gaps = 15/158 (9%) Frame = +1
Query: 4 SLMEEAPHSPYHSRKRKKRKKMDVSLDFVP-----------AKEGHACPFVGYFPSGFDP 150 +L AP S +K+K KK + D + A P VGYFPSG+DP Sbjct: 6 TLATPAPASASTKKKKKHSKKHKAASDAPTNVTVDASLMGGSSYVAAAPVVGYFPSGYDP 65
Query: 151 LQFKQEHETQSEQEDPGRLKVSAYQNTEKYKTRQH----QVVVTPPDTTLDFVGTNYLGE 318 L E+ PG T+ ++ +H +VV P DFVG +Y GE Sbjct: 66 LTTAAGAESA-----PG---------TQLFRHEKHPTWVDLVVRSPGGGHDFVGRSYAGE 111
Query: 319 GAMWQPGNYVLGVFDKESLTLQLLPLSGTKVLRMEPRV 432 A+ Q +Y LGV DK S TL+++P++G K+LR+EP + Sbjct: 112 AAVPQVCDYALGVLDKASGTLRIVPIAGKKILRLEPHL 149
>tr|A2XC85|A2XC85_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09911 PE=4 SV=1 Length = 438
Score = 72.4 bits (176), Expect = 2e-11 Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 15/194 (7%) Frame = +1
Query: 37 HSRKR-------KKRKKMDVSLD--FVPAKEGHACPFVGYFPSGFDPLQFKQEHETQSEQ 189 HS+K+ KKR+ + V++D A A P V YFP+G+DPL + + Sbjct: 13 HSKKQEDTNVPEKKREVVHVTVDASLTGAAAAGAAPVVAYFPTGYDPLA---AGGGRKGR 69
Query: 190 EDPGRLKVSAYQNTEKYKTRQHQVV--VTPPDTTLDFVGTNYLGEGAMWQPGNYVLGVFD 363 E P + +++T K+ +R VV T DFVG +Y GE + Q Y LGV D Sbjct: 70 EAP---RTRLFRHT-KHPSRIELVVGAATGGGGGPDFVGRSYAGEAVLPQLTGYALGVLD 125
Query: 364 KESLTLQLLPLSGTKVLRMEPRVRGLDYDVDSLSGVTDVEMSK----EMMLQKRNLLTAT 531 K S TL+++P++ K+LR+EP + SG +S ++ +Q +T Sbjct: 126 KASGTLKVVPIAANKILRLEPHLEVQKLAHSQHSGAVGEAVSSAGDADLKVQD---ITKA 182
Query: 532 FGTHKSRIKQSRYE 573 FGT K + K +++ Sbjct: 183 FGTQKDKAKDIKWQ 196
>tr|Q2R177|Q2R177_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os11g0615100 PE=2 SV=1 Length = 484
Score = 63.2 bits (152), Expect = 1e-08 Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 11/190 (5%) Frame = +1
Query: 37 HSRKR-------KKRKKMDVSLD--FVPAKEGHACPFVGYFPSGFDPLQFKQEHETQSEQ 189 HS+K+ KKR+ + V++D A A P V YFP+G+DPL + + Sbjct: 70 HSKKQEDTNVPEKKREVVHVTVDASLTGAAAAGAAPVVAYFPTGYDPLA---AGGGRKGR 126
Query: 190 EDPGRLKVSAYQNTEKYKTRQHQVV--VTPPDTTLDFVGTNYLGEGAMWQPGNYVLGVFD 363 E P + +++T K+ +R VV T DFVG +Y GE + Q Y LGV D Sbjct: 127 EAP---RTRLFRHT-KHPSRIELVVGAATGGGGGPDFVGRSYAGEAVLPQLTGYALGVLD 182
Query: 364 KESLTLQLLPLSGTKVLRMEPRVRGLDYDVDSLSGVTDVEMSKEMMLQKRNLLTATFGTH 543 K S TL+++P++ K L + V S +G D+++ +T FGT Sbjct: 183 KASGTLKVVPIAANKKLAHSQHSGAVGEAVSS-AGDADLKVQD---------ITKAFGTQ 232
Query: 544 KSRIKQSRYE 573 K + K +++ Sbjct: 233 KDKAKDIKWQ 242
>tr|A3CDD1|A3CDD1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_033303 PE=4 SV=1 Length = 457
Score = 55.8 bits (133), Expect = 2e-06 Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 13/192 (6%) Frame = +1
Query: 37 HSRKR-------KKRKKMDVSLD--FVPAKEGHACPFVGYFPSGFDPLQFKQEHETQSEQ 189 HS+K+ KKR+ + V++D A A P V YFP+G+DPL ++ E Sbjct: 70 HSKKQEDTNVPEKKREVVHVTVDASLTGAAAAGAAPVVAYFPTGYDPLGRRRRQE----- 124
Query: 190 EDPGRLKVSAYQNTEKYKTRQHQVVVTPPDTTLDFVGTNYLGEGAMWQPGNYVLGVFDKE 369 Y GE + Q Y LGV DK Sbjct: 125 --------------------------------------GYAGEAVLPQLTGYALGVLDKA 146
Query: 370 SLTLQLLPLSGTKVLRMEPRVRGLDYDVDSLSGVTDVEMSK----EMMLQKRNLLTATFG 537 S TL+++P++ K+LR++P + SG +S ++ +Q +T FG Sbjct: 147 SGTLKVVPIAANKILRLDPHLEVQKLAHSQHSGAVGEAVSSAGDADLKVQD---ITKAFG 203
Query: 538 THKSRIKQSRYE 573 T K + K +++ Sbjct: 204 TQKDKAKDIKWQ 215
>tr|Q5AD50|Q5AD50_CANAL Putative uncharacterized protein RPA49 OS=Candida albicans GN=RPA49 PE=4 SV=1 Length = 393
Score = 38.9 bits (89), Expect = 0.23 Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 4/136 (2%) Frame = +1
Query: 205 LKVSAYQNTEKYKTRQHQVVVTPPDT-TLDFVGTNYLGEGAMWQPGNYVLGVFDKESLTL 381 L+VS + YK ++ V +T TLD+ GT+ YV+ VFD S ++ Sbjct: 25 LRVSPEVEFDLYKHKKRDDYVLHGETDTLDYNGTSN-------NENEYVVAVFDPNSKSV 77
Query: 382 QLL--PLSGTKVLRMEPRV-RGLDYDVDSLSGVTDVEMSKEMMLQKRNLLTATFGTHKSR 552 +L P TKV + RV +G + VT +RN L FGT K++ Sbjct: 78 ELYKTPYISTKVTAKKNRVYKGPKVKSAGIRNVT-----------QRNALGEAFGTKKAK 126
Query: 553 IKQSRYERSRVKEEAL 600 + E++R+ E L Sbjct: 127 SAITNLEKNRIDSEKL 142
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