DK953435 |
Clone id |
TST39A01NGRL0017_M05 |
Library |
TST39 |
Length |
538 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_M05. 5' end sequence. |
Accession |
DK953435 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL228Contig1 |
Sequence |
ATTTGTATTACATTTCTTCTCTGAGGCGTCTGTTTGAGGGGTTCGAGACCGACATCGCCA TCGCTGCAGTGCCGGCAAGCTTCCCCCCTCATTCCCTCTGTTCGCAGTCCCGTGATCATG AATCCTGAATATGACTATCTTTTCAAACTTTTGCTGATTGGTGATTCGGGCGTTGGGAAA TCTTGCCTTTTGCTTCGGTTTGCTGATGATTCTTATCTGGAAAGCTACATCAGCACAATT GGTGTCGACTTTAAAATTCGCACAGTTGAACTTGACAGCAAAACCATCAAGCTACAGATT TGGGACACTGCTGGTCAAGAGCGATTTCGGACAATCACAAGCAGCTATTATCGGGGAGCT CATGGCATTATTATCGTTTATGACGTTACAGACCAGGAAAGCTTCAACAATGTAAAGCAG TGGTTGAATGAAATTGATCGTTATGCTAGTGAAAATGTGAACAAACTTTTGGTTGGGAAC AAGAGCGATTTGACAGCAAAGAAAGTTGTTGATACACAAACTGCTAAGGCATATGCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q05737 |
Definition |
sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays |
Align length |
140 |
Score (bit) |
266.0 |
E-value |
4.0e-71 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKP5 |
Definition |
tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
140 |
Score (bit) |
273.0 |
E-value |
4.0e-72 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953435|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_M05, 5' (538 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea... 273 4e-72 tr|A9SLS3|A9SLS3_PHYPA Rab1/RabD-family small GTPase OS=Physcomi... 270 4e-71 tr|A9SMJ7|A9SMJ7_PHYPA Rab1/RabD-family small GTPase OS=Physcomi... 269 6e-71 tr|B4FQY4|B4FQY4_MAIZE Putative uncharacterized protein OS=Zea m... 266 4e-70 tr|B4FC26|B4FC26_MAIZE Putative uncharacterized protein OS=Zea m... 266 4e-70 tr|Q949E2|Q949E2_ORYSA Putative GTP-binding protein OS=Oryza sat... 266 7e-70 tr|Q6H8G2|Q6H8G2_ORYSJ cDNA, clone: J100058B03, full insert sequ... 266 7e-70 tr|Q0JQ62|Q0JQ62_ORYSJ cDNA clone:006-208-C02, full insert seque... 266 7e-70 tr|A2WLD6|A2WLD6_ORYSI Putative uncharacterized protein OS=Oryza... 266 7e-70 tr|B7FH02|B7FH02_MEDTR Putative uncharacterized protein OS=Medic... 265 1e-69 tr|A9PEC2|A9PEC2_POPTR Putative uncharacterized protein OS=Popul... 265 1e-69 tr|A9P8E1|A9P8E1_POPTR Putative uncharacterized protein OS=Popul... 265 1e-69 tr|A7R0F4|A7R0F4_VITVI Chromosome undetermined scaffold_306, who... 265 1e-69 tr|Q2A9H3|Q2A9H3_BRAOL GTP-binding protein, putative OS=Brassica... 264 3e-69 tr|A9NPH9|A9NPH9_PICSI Putative uncharacterized protein OS=Picea... 263 3e-69 tr|Q2A9V7|Q2A9V7_BRAOL GTP-binding protein, putative OS=Brassica... 263 4e-69 tr|Q9SXT5|Q9SXT5_CICAR Rab-type small GTP-binding protein OS=Cic... 263 6e-69 tr|Q1WK27|Q1WK27_CHLIN YptC1 OS=Chlamydomonas incerta GN=yptC1 P... 263 6e-69 tr|A8JHQ7|A8JHQ7_CHLRE Small rab-related GTPase OS=Chlamydomonas... 263 6e-69 tr|Q08153|Q08153_PEA GTP-binding protein OS=Pisum sativum PE=2 SV=1 262 7e-69 tr|B6RB23|B6RB23_HALDI Ras-related protein Rab-1A OS=Haliotis di... 262 7e-69 tr|Q9FPJ4|Q9FPJ4_ARATH AT5g47200 (Ras-related small GTP-binding ... 262 1e-68 tr|Q4T3J6|Q4T3J6_TETNG Chromosome undetermined SCAF10022, whole ... 261 1e-68 tr|Q40203|Q40203_LOTJA RAB1C OS=Lotus japonicus GN=rab1C PE=2 SV=1 261 1e-68 tr|Q9SEH3|Q9SEH3_ARATH Ras-related small GTP-binding protein (Ra... 261 2e-68 tr|Q8W4S8|Q8W4S8_ARATH AT4g17530/dl4800c OS=Arabidopsis thaliana... 261 2e-68 tr|Q68V18|Q68V18_POAPR RAB1-like OS=Poa pratensis GN=rab1-1 PE=2... 261 2e-68 tr|Q68V17|Q68V17_POAPR RAB1-like OS=Poa pratensis GN=rab1-2 PE=2... 261 2e-68 tr|O24112|O24112_NICPL Small GTP-binding protein OS=Nicotiana pl... 261 2e-68 tr|A9PBJ4|A9PBJ4_POPTR Putative uncharacterized protein OS=Popul... 261 2e-68
>tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 202
Score = 273 bits (698), Expect = 4e-72 Identities = 135/140 (96%), Positives = 138/140 (98%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYA 537 NK+DLTAKKVVD QTAKA+A Sbjct: 121 NKNDLTAKKVVDYQTAKAFA 140
>tr|A9SLS3|A9SLS3_PHYPA Rab1/RabD-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabD11 PE=3 SV=1 Length = 204
Score = 270 bits (690), Expect = 4e-71 Identities = 133/140 (95%), Positives = 137/140 (97%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYA 537 NKSDL +KKVVD +TAKA+A Sbjct: 121 NKSDLASKKVVDYETAKAFA 140
>tr|A9SMJ7|A9SMJ7_PHYPA Rab1/RabD-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabD12 PE=3 SV=1 Length = 203
Score = 269 bits (688), Expect = 6e-71 Identities = 134/140 (95%), Positives = 136/140 (97%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYA 537 NKSDL +KKVVD TAKA+A Sbjct: 121 NKSDLASKKVVDYATAKAFA 140
>tr|B4FQY4|B4FQY4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 203
Score = 266 bits (681), Expect = 4e-70 Identities = 132/140 (94%), Positives = 136/140 (97%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYA 537 NKSDLTA KVV T+TAKA+A Sbjct: 121 NKSDLTANKVVATETAKAFA 140
>tr|B4FC26|B4FC26_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 203
Score = 266 bits (681), Expect = 4e-70 Identities = 132/140 (94%), Positives = 136/140 (97%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYA 537 NKSDLTA KVV T+TAKA+A Sbjct: 121 NKSDLTANKVVATETAKAFA 140
>tr|Q949E2|Q949E2_ORYSA Putative GTP-binding protein OS=Oryza sativa GN=W455ERIPDK PE=3 SV=1 Length = 203
Score = 266 bits (679), Expect = 7e-70 Identities = 131/140 (93%), Positives = 136/140 (97%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYA 537 NKSDLTA KVV ++TAKA+A Sbjct: 121 NKSDLTANKVVSSETAKAFA 140
>tr|Q6H8G2|Q6H8G2_ORYSJ cDNA, clone: J100058B03, full insert sequence OS=Oryza sativa subsp. japonica GN=P0491E01.39 PE=2 SV=1 Length = 203
Score = 266 bits (679), Expect = 7e-70 Identities = 131/140 (93%), Positives = 136/140 (97%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYA 537 NKSDLTA KVV ++TAKA+A Sbjct: 121 NKSDLTANKVVSSETAKAFA 140
>tr|Q0JQ62|Q0JQ62_ORYSJ cDNA clone:006-208-C02, full insert sequence OS=Oryza sativa subsp. japonica GN=Os01g0179700 PE=2 SV=1 Length = 203
Score = 266 bits (679), Expect = 7e-70 Identities = 131/140 (93%), Positives = 136/140 (97%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYA 537 NKSDLTA KVV ++TAKA+A Sbjct: 121 NKSDLTANKVVSSETAKAFA 140
>tr|A2WLD6|A2WLD6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00645 PE=3 SV=1 Length = 203
Score = 266 bits (679), Expect = 7e-70 Identities = 131/140 (93%), Positives = 136/140 (97%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYA 537 NKSDLTA KVV ++TAKA+A Sbjct: 121 NKSDLTANKVVSSETAKAFA 140
>tr|B7FH02|B7FH02_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 202
Score = 265 bits (676), Expect = 1e-69 Identities = 130/140 (92%), Positives = 136/140 (97%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYA 537 NKSDL+ KKVV ++TAKA+A Sbjct: 121 NKSDLSDKKVVSSETAKAFA 140
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