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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953436
Clone id TST39A01NGRL0017_M06
Library
Length 758
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_M06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCATCTCCATAGCCGCTTCCTCG
GCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTGGTCTC
AAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAATGGCAGC
CGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCC
TACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAA
GGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCAC
GGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGC
CAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCC
TTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGGGCAGGTCTCCCGGTTTCCTTGT
CCAGAAGCCCTCTGTCCTAAACTTTCTTAAAGCAAGGCCAATTTAGTTTGGCATGAATGC
CTGGCTTCCCATTTCCCACTGGGCGCCTAAAAAGCTTGGCTCTTTTGAAGCCTTTGGTGT
CCCCACCCACTTTTGCATACCATAATGAAAAAACCTTTCCCAAGGGGGTGGGCTTTCCCT
GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 151
Score (bit) 176.0
E-value 9.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953436|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_M06, 5'
         (722 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   176   9e-44
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   176   2e-43
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   174   6e-43
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   174   6e-43
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   173   1e-42
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   172   2e-42
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   172   2e-42
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   172   2e-42
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   171   4e-42
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   171   4e-42
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   171   5e-42
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   171   5e-42
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   171   5e-42
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   171   5e-42
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   170   6e-42
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   170   6e-42
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   170   6e-42
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   169   1e-41
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   169   1e-41
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   169   1e-41
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   169   1e-41
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   169   1e-41
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   169   1e-41
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   169   1e-41
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   168   2e-41
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   168   3e-41
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   167   4e-41
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   167   4e-41
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   167   5e-41
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   166   9e-41

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  176 bits (447), Expect = 9e-44
 Identities = 84/151 (55%), Positives = 105/151 (69%), Gaps = 5/151 (3%)
 Frame = +1

Query: 97  LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 264
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 265 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 441
            ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 442 REIAECAKEYPEAFIRVLGFDAKRQGQVSRF 534
           +E+ EC KEYP AFIRV+GFD  RQ Q   F
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDNIRQVQCISF 172


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  176 bits (445), Expect = 2e-43
 Identities = 86/147 (58%), Positives = 106/147 (72%), Gaps = 5/147 (3%)
 Frame = +1

Query: 109 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 276
           F+ LK+T+ F    K+ N +    SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK
Sbjct: 28  FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 277 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           +VD+++RK   PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC D++ VL+E+ 
Sbjct: 88  EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELE 147

Query: 454 ECAKEYPEAFIRVLGFDAKRQGQVSRF 534
           EC K YP AFIR++GFD KRQ Q+  F
Sbjct: 148 ECKKAYPSAFIRIIGFDNKRQVQIISF 174


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  174 bits (440), Expect = 6e-43
 Identities = 84/146 (57%), Positives = 102/146 (69%), Gaps = 4/146 (2%)
 Frame = +1

Query: 109 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 276
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 277 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 456
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 457 CAKEYPEAFIRVLGFDAKRQGQVSRF 534
             K YPE F+R++GFD KRQ Q   F
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISF 171


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  174 bits (440), Expect = 6e-43
 Identities = 84/146 (57%), Positives = 102/146 (69%), Gaps = 4/146 (2%)
 Frame = +1

Query: 109 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 276
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 277 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 456
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 457 CAKEYPEAFIRVLGFDAKRQGQVSRF 534
             K YPE F+R++GFD KRQ Q   F
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISF 171


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  173 bits (438), Expect = 1e-42
 Identities = 80/143 (55%), Positives = 99/143 (69%)
 Frame = +1

Query: 106 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 285
           S +    T  FA  S  P   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 286 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 465
           +++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147

Query: 466 EYPEAFIRVLGFDAKRQGQVSRF 534
            YP+ F R++GFD  RQ Q   F
Sbjct: 148 AYPDYFNRIIGFDNTRQVQCISF 170


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  172 bits (436), Expect = 2e-42
 Identities = 83/150 (55%), Positives = 108/150 (72%), Gaps = 4/150 (2%)
 Frame = +1

Query: 97  LSKSFSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQ 267
           L+  F+GLK++  F   K  N +    SNGSRV+ M VW P   KKFETLSYLPPL+ EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 268 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 444
           + K+V++++RKGW PC+EF+ + G V+R++    GYYDGRYW MW+LP+FG  DAA VL+
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 445 EIAECAKEYPEAFIRVLGFDAKRQGQVSRF 534
           E+AEC  EYPEAFIR++GFD  RQ Q   F
Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQCISF 170


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  172 bits (435), Expect = 2e-42
 Identities = 82/146 (56%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
 Frame = +1

Query: 109 FSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 279
           F+GLK+   F   K  N  +   SNG RV  M VW P   KK+ETLSYLPPL+  Q+AK+
Sbjct: 25  FTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKE 84

Query: 280 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 456
           VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D+A V++E+AE
Sbjct: 85  VDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAE 144

Query: 457 CAKEYPEAFIRVLGFDAKRQGQVSRF 534
           C KEYP+A+IR++GFD  RQ Q   F
Sbjct: 145 CKKEYPQAWIRIIGFDNVRQVQCIMF 170


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  172 bits (435), Expect = 2e-42
 Identities = 81/147 (55%), Positives = 104/147 (70%), Gaps = 5/147 (3%)
 Frame = +1

Query: 109 FSGLKATTLFAP--KSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 276
           F+GLK++  F    K+ N +    SNG RV+ M VW P   KKFETLSYLP L+  ++AK
Sbjct: 24  FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 277 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           +VD+++R  W PC+EF+ + G VYREH +  GYYDGRYW MWKLP+FGC D+A VL+E+ 
Sbjct: 84  EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 454 ECAKEYPEAFIRVLGFDAKRQGQVSRF 534
           EC KEYP AFIR++GFD  RQ Q   F
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISF 170


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  171 bits (433), Expect = 4e-42
 Identities = 83/146 (56%), Positives = 106/146 (72%), Gaps = 4/146 (2%)
 Frame = +1

Query: 109 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 279
           F+GLK+++ F    KS +  +I SNG RV  M VW P   KKFETLSYLPPLSSE +AK+
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 280 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 456
           VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D++ VL+E+ E
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149

Query: 457 CAKEYPEAFIRVLGFDAKRQGQVSRF 534
             K YP++FIR++GFD  RQ Q   F
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQCISF 175


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  171 bits (433), Expect = 4e-42
 Identities = 81/148 (54%), Positives = 101/148 (68%), Gaps = 5/148 (3%)
 Frame = +1

Query: 106 SFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 273
           SF+GLK+   F       L I    SNG RV  MLVW P + KK+ETLSYLP LS EQ+ 
Sbjct: 25  SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 274 KQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREI 450
           K+++++++KGW PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC DA  VL E+
Sbjct: 85  KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEV 144

Query: 451 AECAKEYPEAFIRVLGFDAKRQGQVSRF 534
            E  K YP+A+IR++GFD  RQ Q   F
Sbjct: 145 QEAKKAYPQAWIRIIGFDNVRQVQCISF 172
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 146
Score (bit) 273.0
E-value 6.0e-72
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953436|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_M06, 5'
         (722 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   273   6e-72
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   191   3e-47
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   188   3e-46
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   187   5e-46
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   187   6e-46
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   187   6e-46
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   184   4e-45
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   178   3e-43
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   178   3e-43
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   178   4e-43
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   178   4e-43
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   177   5e-43
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   177   8e-43
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   177   8e-43
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   176   1e-42
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   176   2e-42
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   175   2e-42
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   175   3e-42
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   174   5e-42
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   174   5e-42
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   173   9e-42
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   173   1e-41
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   173   1e-41
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   172   2e-41
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   172   2e-41
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   172   3e-41
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   171   3e-41
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   171   4e-41
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   171   4e-41
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   171   6e-41

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  273 bits (699), Expect = 6e-72
 Identities = 127/146 (86%), Positives = 137/146 (93%)
 Frame = +1

Query: 97  LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 276
           LSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 277 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 456
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 457 CAKEYPEAFIRVLGFDAKRQGQVSRF 534
           CAKEYP AFIRVLGFDAKRQ QV+ F
Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGF 167


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  191 bits (486), Expect = 3e-47
 Identities = 90/147 (61%), Positives = 109/147 (74%), Gaps = 3/147 (2%)
 Frame = +1

Query: 103 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 282
           K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 454 ECAKEYPEAFIRVLGFDAKRQGQVSRF 534
           EC + +P  ++RVLGFD+K+Q Q+  F
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGF 173


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  188 bits (478), Expect = 3e-46
 Identities = 89/147 (60%), Positives = 108/147 (73%), Gaps = 3/147 (2%)
 Frame = +1

Query: 103 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 282
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 454 ECAKEYPEAFIRVLGFDAKRQGQVSRF 534
           EC + +P  ++RVLGFD+K+Q Q+  F
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGF 173


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  187 bits (476), Expect = 5e-46
 Identities = 87/147 (59%), Positives = 107/147 (72%), Gaps = 3/147 (2%)
 Frame = +1

Query: 103 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 282
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 454 ECAKEYPEAFIRVLGFDAKRQGQVSRF 534
           EC   YP  ++RVLGFD+K+Q Q+  F
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGF 178


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  187 bits (475), Expect = 6e-46
 Identities = 86/147 (58%), Positives = 109/147 (74%), Gaps = 3/147 (2%)
 Frame = +1

Query: 103 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 282
           K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 454 ECAKEYPEAFIRVLGFDAKRQGQVSRF 534
           EC  ++P  ++RVLGFD+K+Q Q+  F
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGF 208


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  187 bits (475), Expect = 6e-46
 Identities = 87/147 (59%), Positives = 108/147 (73%), Gaps = 3/147 (2%)
 Frame = +1

Query: 103 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 282
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 454 ECAKEYPEAFIRVLGFDAKRQGQVSRF 534
           EC  ++P  ++RVLGFD+K+Q Q+  F
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGF 178


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  184 bits (468), Expect = 4e-45
 Identities = 84/147 (57%), Positives = 109/147 (74%), Gaps = 3/147 (2%)
 Frame = +1

Query: 103 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 282
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 454 ECAKEYPEAFIRVLGFDAKRQGQVSRF 534
           EC  ++P  ++RVLGFD+K+Q Q+  F
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGF 177


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  178 bits (452), Expect = 3e-43
 Identities = 84/151 (55%), Positives = 106/151 (70%), Gaps = 5/151 (3%)
 Frame = +1

Query: 97  LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 264
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 265 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 441
            ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 442 REIAECAKEYPEAFIRVLGFDAKRQGQVSRF 534
           +E+ EC KEYP AFIRV+GFD+ RQ Q   F
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDSVRQVQCISF 172


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  178 bits (452), Expect = 3e-43
 Identities = 82/144 (56%), Positives = 102/144 (70%)
 Frame = +1

Query: 103 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 282
           K+FSGLK+ T+F+ K+ N  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 462
           ++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 463 KEYPEAFIRVLGFDAKRQGQVSRF 534
           K +P  F+RVLGFD  +Q Q+  F
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGF 175


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  178 bits (451), Expect = 4e-43
 Identities = 83/144 (57%), Positives = 102/144 (70%)
 Frame = +1

Query: 103 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 282
           K+FSGLK++TLF+ K+ +  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 462
           D+M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD A VLREI EC 
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 463 KEYPEAFIRVLGFDAKRQGQVSRF 534
           K +P  F+RVLGFD  +Q Q+  F
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGF 175