DK953461 |
Clone id |
TST39A01NGRL0017_N07 |
Library |
TST39 |
Length |
235 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_N07. 5' end sequence. |
Accession |
DK953461 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL77Contig1 |
Sequence |
AGGGGTCTCTAGAAGTGGTCGCTTCGTCCCCAGCTTCTTTCGAGCTCCACCGGCGCAATG GCGAAATAATCCAGGGAGGCTGAAAATATCACAAAAGCTTGTAAGTCTAGAAGTTCTGAC CTCCGGGTGCAATTTAAAAACACCAGCAAGGAAGCACAAGCAATCAAGAAACTTGACCTT GCAAAGGCCAAAAGGTATTTGGAAAATGTGGTGGCCCACAAGAAGGCTATCCCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q93VI3 |
Definition |
sp|Q93VI3|RL171_ARATH 60S ribosomal protein L17-1 OS=Arabidopsis thaliana |
Align length |
59 |
Score (bit) |
81.3 |
E-value |
1.0e-15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NT14 |
Definition |
tr|A9NT14|A9NT14_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
59 |
Score (bit) |
83.2 |
E-value |
6.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953461|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_N07, 5' (235 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NT14|A9NT14_PICSI Putative uncharacterized protein OS=Picea... 83 6e-15 tr|A7PHG3|A7PHG3_VITVI Chromosome chr17 scaffold_16, whole genom... 82 1e-14 tr|A9TXV0|A9TXV0_PHYPA Predicted protein (Fragment) OS=Physcomit... 82 1e-14 tr|A9SN83|A9SN83_PHYPA Predicted protein OS=Physcomitrella paten... 82 1e-14 tr|A9NYW9|A9NYW9_PICSI Putative uncharacterized protein OS=Picea... 82 1e-14 tr|A9RQX8|A9RQX8_PHYPA Predicted protein OS=Physcomitrella paten... 81 2e-14 tr|A5B412|A5B412_VITVI Putative uncharacterized protein OS=Vitis... 81 2e-14 tr|Q947H2|Q947H2_PETHY Ribosomal protein OS=Petunia hybrida GN=P... 81 3e-14 tr|A9SN82|A9SN82_PHYPA Predicted protein (Fragment) OS=Physcomit... 81 3e-14 tr|A9S035|A9S035_PHYPA Predicted protein (Fragment) OS=Physcomit... 80 4e-14 tr|Q0WRE5|Q0WRE5_ARATH Ribosomal protein L17-like protein OS=Ara... 80 5e-14 tr|A9NT26|A9NT26_PICSI Putative uncharacterized protein OS=Picea... 80 5e-14 tr|A9PJV5|A9PJV5_POPJC Putative uncharacterized protein OS=Popul... 79 9e-14 tr|A9PBU5|A9PBU5_POPTR Putative uncharacterized protein OS=Popul... 79 9e-14 tr|A9PA96|A9PA96_POPTR Putative uncharacterized protein OS=Popul... 79 9e-14 tr|A7QP85|A7QP85_VITVI Chromosome chr1 scaffold_136, whole genom... 79 9e-14 tr|Q307X7|Q307X7_SOLTU Ribosomal protein PETRP-like OS=Solanum t... 78 2e-13 tr|A9PE02|A9PE02_POPTR Putative uncharacterized protein OS=Popul... 77 4e-13 tr|A7QP86|A7QP86_VITVI Chromosome chr1 scaffold_136, whole genom... 77 4e-13 tr|A9PCW9|A9PCW9_POPTR Putative uncharacterized protein OS=Popul... 76 7e-13 tr|B3TM08|B3TM08_ELAGV Ribosomal protein OS=Elaeis guineensis va... 75 2e-12 tr|Q6RK02|Q6RK02_CAPAN Ribosomal protein PETRP OS=Capsicum annuu... 74 3e-12 tr|Q6K1W6|Q6K1W6_ORYSJ Os09g0258600 protein OS=Oryza sativa subs... 74 4e-12 tr|B7FGK9|B7FGK9_MEDTR Putative uncharacterized protein OS=Medic... 74 4e-12 tr|A2YZ23|A2YZ23_ORYSI Putative uncharacterized protein OS=Oryza... 74 4e-12 tr|B3TM07|B3TM07_ELAGV Ribosomal protein L17 OS=Elaeis guineensi... 73 8e-12 tr|B6T1L4|B6T1L4_MAIZE 60S ribosomal protein L17 OS=Zea mays PE=... 70 7e-11 tr|B4FNT0|B4FNT0_MAIZE Putative uncharacterized protein OS=Zea m... 70 7e-11 tr|A9QQ42|A9QQ42_LYCSI 60S ribosomal protein l17 OS=Lycosa singo... 70 7e-11 tr|Q6ZIA1|Q6ZIA1_ORYSJ Os08g0530200 protein OS=Oryza sativa subs... 69 9e-11
>tr|A9NT14|A9NT14_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 183
Score = 83.2 bits (204), Expect = 6e-15 Identities = 41/59 (69%), Positives = 49/59 (83%) Frame = +1
Query: 58 MAK*SREAENITKACKSRSSDLRVQFKNTSKEAQAIKKLDLAKAKRYLENVVAHKKAIP 234 M K SRE +N TK+CK+R SDLRV FKNT + AQA+KKL LAKAK YLE+V+AHK+AIP Sbjct: 1 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAQAVKKLPLAKAKAYLEDVLAHKQAIP 59
>tr|A7PHG3|A7PHG3_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017930001 PE=3 SV=1 Length = 216
Score = 82.4 bits (202), Expect = 1e-14 Identities = 41/60 (68%), Positives = 49/60 (81%) Frame = +1
Query: 55 AMAK*SREAENITKACKSRSSDLRVQFKNTSKEAQAIKKLDLAKAKRYLENVVAHKKAIP 234 AM K SRE +N TK+CK+R SDLRV FKNT + A AI+KL L KAKRYLE+V+AHK+AIP Sbjct: 33 AMVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLRLTKAKRYLEDVLAHKQAIP 92
>tr|A9TXV0|A9TXV0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152415 PE=3 SV=1 Length = 190
Score = 82.0 bits (201), Expect = 1e-14 Identities = 40/57 (70%), Positives = 48/57 (84%) Frame = +1
Query: 64 K*SREAENITKACKSRSSDLRVQFKNTSKEAQAIKKLDLAKAKRYLENVVAHKKAIP 234 K +RE +N TKACK+R SDLRV FKNT + AQAIK ++LAKAKRYLE+V AHK+AIP Sbjct: 3 KYAREPDNATKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIP 59
>tr|A9SN83|A9SN83_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165821 PE=3 SV=1 Length = 186
Score = 82.0 bits (201), Expect = 1e-14 Identities = 39/59 (66%), Positives = 49/59 (83%) Frame = +1
Query: 58 MAK*SREAENITKACKSRSSDLRVQFKNTSKEAQAIKKLDLAKAKRYLENVVAHKKAIP 234 M K +R+ +N TKACK+R SDLRV FKNT + AQAIK ++LAKAKRYLE+V AHK+A+P Sbjct: 1 MVKYARDPDNSTKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAVP 59
>tr|A9NYW9|A9NYW9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 183
Score = 82.0 bits (201), Expect = 1e-14 Identities = 40/59 (67%), Positives = 49/59 (83%) Frame = +1
Query: 58 MAK*SREAENITKACKSRSSDLRVQFKNTSKEAQAIKKLDLAKAKRYLENVVAHKKAIP 234 M K SRE +N TK+CK+R SDLRV FKNT + AQA+KKL +AKAK YLE+V+AHK+AIP Sbjct: 1 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAQAVKKLPVAKAKAYLEDVLAHKQAIP 59
>tr|A9RQX8|A9RQX8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177216 PE=3 SV=1 Length = 187
Score = 81.3 bits (199), Expect = 2e-14 Identities = 40/59 (67%), Positives = 48/59 (81%) Frame = +1
Query: 58 MAK*SREAENITKACKSRSSDLRVQFKNTSKEAQAIKKLDLAKAKRYLENVVAHKKAIP 234 M K +R+ N TKACK+R SDLRV FKNT + AQAIK ++LAKAKRYLE+V AHK+AIP Sbjct: 1 MVKYARDPVNATKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIP 59
>tr|A5B412|A5B412_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011749 PE=3 SV=1 Length = 183
Score = 81.3 bits (199), Expect = 2e-14 Identities = 40/59 (67%), Positives = 48/59 (81%) Frame = +1
Query: 58 MAK*SREAENITKACKSRSSDLRVQFKNTSKEAQAIKKLDLAKAKRYLENVVAHKKAIP 234 M K SRE +N TK+CK+R SDLRV FKNT + A AI+KL LAKAKRYLE+V+ HK+AIP Sbjct: 1 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLVHKQAIP 59
>tr|Q947H2|Q947H2_PETHY Ribosomal protein OS=Petunia hybrida GN=PETRP PE=2 SV=1 Length = 175
Score = 80.9 bits (198), Expect = 3e-14 Identities = 39/59 (66%), Positives = 48/59 (81%) Frame = +1
Query: 58 MAK*SREAENITKACKSRSSDLRVQFKNTSKEAQAIKKLDLAKAKRYLENVVAHKKAIP 234 M K SRE EN TK+CK+R SDLRV FKNT + A A++K+ L KAKRYLE+V+AHK+AIP Sbjct: 1 MVKYSREPENPTKSCKARGSDLRVHFKNTRETAHALRKMPLGKAKRYLEDVLAHKQAIP 59
>tr|A9SN82|A9SN82_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_132604 PE=3 SV=1 Length = 229
Score = 80.9 bits (198), Expect = 3e-14 Identities = 39/57 (68%), Positives = 48/57 (84%) Frame = +1
Query: 64 K*SREAENITKACKSRSSDLRVQFKNTSKEAQAIKKLDLAKAKRYLENVVAHKKAIP 234 K +R+ +N TKACK+R SDLRV FKNT + AQAIK ++LAKAKRYLE+V AHK+AIP Sbjct: 2 KYARDPDNATKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIP 58
>tr|A9S035|A9S035_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122013 PE=3 SV=1 Length = 174
Score = 80.5 bits (197), Expect = 4e-14 Identities = 39/57 (68%), Positives = 48/57 (84%) Frame = +1
Query: 64 K*SREAENITKACKSRSSDLRVQFKNTSKEAQAIKKLDLAKAKRYLENVVAHKKAIP 234 K +R+ +N TKACK+R SDLRV FKNT + AQAIK ++LAKAKRYLE+V AHK+AIP Sbjct: 3 KYARDPDNSTKACKARGSDLRVHFKNTREAAQAIKHMELAKAKRYLEDVCAHKQAIP 59
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