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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953471
Clone id TST39A01NGRL0017_N17
Library
Length 528
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_N17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTAGTTATTGTCAAGAAATGAAATTCTGGAACGGCAATGGAGGCCAAGGTCTTCGTTTCG
AGTGTGACCAAGCCGGTGAGCACCAATCTCTCTTCATCCTCACGGTGTAAACTGGCTGTA
GACTTCACAAGCCAGTGCCCATCTTGCCTCCTTTCATCACGTCCTACTCCGAAGTATCAC
GTTTTGAGCCTCGCAAGCCTTCAGGCCGAGTTTCCTGAGCCCGACCGAGAAGATGACCCT
GTAAAAGATATGCCATCAGAGCTTACATCAAATAAAGAAGATCTTTCTCAAGGAGAATTA
AGCTTAACAGATATTCATAGAGTGTTGGTGGCTCCTGTTGAACACTTGAAAGAGTCATGG
AACCAAGTCTCGGAGCTATCGAGAGAGCAAGGTGAAGTGACAAGAAGGCGGGTGTTGGGA
GCACCCATGTTCATGTCTCTGGCCTGCCTTCTTGGAAGTTCCACAAGAGATGCCCATGCT
CTTGTGCGGGCCTTTATTGATGCGTCGAAGGAACCCAGCAAGCCCTTC
■■Homology search results ■■ -
sp_hit_id O14114
Definition sp|O14114|YEJJ_SCHPO Uncharacterized AAA domain-containing protein C31G5.19 OS=Schizosaccharomyces pombe
Align length 121
Score (bit) 35.0
E-value 0.22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953471|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_N17, 5'
         (528 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O14114|YEJJ_SCHPO Uncharacterized AAA domain-containing prote...    35   0.22 
sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing prot...    33   1.1  
sp|Q8K387|UBP45_MOUSE Ubiquitin carboxyl-terminal hydrolase 45 O...    32   1.4  
sp|Q54NQ9|SFXN_DICDI Sideroflexin OS=Dictyostelium discoideum GN...    32   1.9  
sp|A0JMF7|FA29A_DANRE Protein FAM29A OS=Danio rerio GN=fam29a PE...    31   4.2  
sp|Q6W2J9|BCOR_HUMAN BCL-6 corepressor OS=Homo sapiens GN=BCOR P...    31   4.2  
sp|Q944A7|Y4523_ARATH Putative serine/threonine-protein kinase A...    30   5.5  
sp|Q759Y6|RNA14_ASHGO mRNA 3'-end-processing protein RNA14 OS=As...    30   5.5  
sp|P02444|KRA33_SHEEP Keratin, high sulfur matrix protein, IIIB3...    30   5.5  
sp|Q9RKL1|PUR7_STRCO Phosphoribosylaminoimidazole-succinocarboxa...    30   7.1  
sp|Q8CGN4|BCOR_MOUSE BCL-6 corepressor OS=Mus musculus GN=Bcor P...    30   7.2  
sp|A5W0T9|ZIPA_PSEP1 Cell division protein zipA homolog OS=Pseud...    30   9.4  
sp|Q92212|STE20_CANAL Serine/threonine-protein kinase CST20 OS=C...    30   9.4  
sp|A1RGU2|NADD_SHESW Probable nicotinate-nucleotide adenylyltran...    30   9.4  
sp|A4Y9F2|NADD_SHEPC Probable nicotinate-nucleotide adenylyltran...    30   9.4  
sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila mela...    30   9.4  
sp|Q5R803|FRMD3_PONAB FERM domain-containing protein 3 OS=Pongo ...    30   9.4  
sp|A2A2Y4|FRMD3_HUMAN FERM domain-containing protein 3 OS=Homo s...    30   9.4  

>sp|O14114|YEJJ_SCHPO Uncharacterized AAA domain-containing protein
            C31G5.19 OS=Schizosaccharomyces pombe GN=SPAC31G5.19 PE=2
            SV=1
          Length = 1190

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
 Frame = +1

Query: 28   GTAMEAKVFVSSVTKPVSTNLSSSSRCKLAVDFTSQCPSCLLSSRPTPKYHVLS----LA 195
            G   EA + VS+    VSTN+SS+ R  + VD     P+ + ++ PT  +++ S    + 
Sbjct: 1057 GVPSEAALRVST---DVSTNISSNGRADIPVDTLITSPADVPNNAPTDAHNITSADGHIE 1113

Query: 196  SLQAE--FPEPDREDDPVKDMPSELTSNKEDLSQGELSLTDIHRVLVAPVEHLKESWNQV 369
            +++ E  FP+   ++D +  +   L  +    +  +  L  +H  L   + + K  WN+ 
Sbjct: 1114 NIEQEVVFPDLVFDEDRLTPLKQLLIDSTTGFTVDQ--LLHLHSFLYQIIWNTKSEWNRN 1171

Query: 370  S 372
            S
Sbjct: 1172 S 1172


>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein
           1 OS=Homo sapiens GN=PHRF1 PE=1 SV=2
          Length = 1649

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = +1

Query: 79  STNLSSSSRCKLAVDFTSQCPSCLLSSRPT--PKYHVLSLASLQAEFPEPDREDDPVKDM 252
           S  LS++    L+    +   S L S +P   P    LS   L A  PEPD E++PV D+
Sbjct: 446 SEELSANPLSPLSAKRRALSRSALQSHQPVARPVSVGLSRRRLPAAVPEPDLEEEPVPDL 505

Query: 253 PSELTSNKEDLSQGELSLTDIHR 321
              + S +  L  G   +  IHR
Sbjct: 506 LGSILSGQSLLMLGSSDVI-IHR 527


>sp|Q8K387|UBP45_MOUSE Ubiquitin carboxyl-terminal hydrolase 45
           OS=Mus musculus GN=Usp45 PE=2 SV=1
          Length = 813

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
 Frame = +1

Query: 226 REDDPVKDMPSELTSNK-------EDLSQG-ELSLTDIHRVLVAPVEHLKES-----WNQ 366
           R  DP KD+P +   NK       ED S    + LT  H      V H+K++     W+ 
Sbjct: 2   RVKDPSKDLPEKGKRNKRPLLPHDEDSSDDIAVGLTCQHVSYAVSVNHVKKAVAESLWSV 61

Query: 367 VSELSREQGEVTRRRVLGAPMFMSLACLL---GSSTRDAHAL 483
            SE  +E+     + VL A +++ L C L   G ++   H+L
Sbjct: 62  CSECLKERRFCDGQPVLPADVWLCLKCGLQGCGKNSESQHSL 103


>sp|Q54NQ9|SFXN_DICDI Sideroflexin OS=Dictyostelium discoideum
           GN=sfxn PE=3 SV=1
          Length = 329

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +1

Query: 253 PSELTSNKEDLSQGELSLTDIHRVLVAPVEHLKESW 360
           PS L + ++DLSQ +  L +  + LV PV+H  E W
Sbjct: 34  PSTLFATEKDLSQSKTLLDNFKKGLVDPVKHSDELW 69


>sp|A0JMF7|FA29A_DANRE Protein FAM29A OS=Danio rerio GN=fam29a PE=2
           SV=1
          Length = 794

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +1

Query: 241 VKDMPSELTSNKEDLSQGELSLTDIHRVLVAPVEHLKESWNQVSE-LSREQGE 396
           ++D+ +E  +  + L +   S+TD+  V++A V+ L+  WN+V   LS  QG+
Sbjct: 196 LRDLDAE-NAKYDSLLKEHDSITDLKEVILAKVQKLRGLWNEVDRFLSNHQGK 247


>sp|Q6W2J9|BCOR_HUMAN BCL-6 corepressor OS=Homo sapiens GN=BCOR PE=1
            SV=1
          Length = 1755

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
 Frame = +1

Query: 199  LQAEFPEPDREDDPVKDMPSELTSNKEDLSQGELS-------LTDIHRVLVAPVEHLKES 357
            L+A+     ++D P ++M +  +++ ED    EL+       LT +H      + HL+E 
Sbjct: 1158 LKAKRRRVSKDDWPEREMTNSSSNHLEDPHYSELTNLKVCIELTGLHPKKQRHLLHLRER 1217

Query: 358  W-NQVSELSREQGEVTRRRVLGA 423
            W  QVS    + G  +R+ V  A
Sbjct: 1218 WEQQVSAADGKPGRQSRKEVTQA 1240


>sp|Q944A7|Y4523_ARATH Putative serine/threonine-protein kinase
           At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1
          Length = 512

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
 Frame = +1

Query: 94  SSSRCKLAVDFTSQCPSCLLSSRPTPKYHVLSLASLQAEFPEPDREDDPVKDMPSELTSN 273
           S+    + V+  SQC       RP  K  V +LA LQ +   P      +K      ++ 
Sbjct: 295 STEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTP 354

Query: 274 KEDLSQ-----GELSLTDIHRVLVAPVEHLKESWNQVS 372
           +  LS        + LT IH++LV       E  N++S
Sbjct: 355 QRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGTNELS 392


>sp|Q759Y6|RNA14_ASHGO mRNA 3'-end-processing protein RNA14
           OS=Ashbya gossypii GN=RNA14 PE=3 SV=1
          Length = 661

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +1

Query: 268 SNKEDLSQGELSLTDIHRVLVAPVEHLKESWNQVSELSREQGEVTRRRVLG 420
           S  E+ S+ E+      R+L  PVE L+  W + ++  +E  ++T R+ +G
Sbjct: 186 SKWEEQSRVEILRKLYKRLLCLPVESLERYWEKYTQWEQEVNQLTARKFIG 236


>sp|P02444|KRA33_SHEEP Keratin, high sulfur matrix protein, IIIB3
           OS=Ovis aries PE=1 SV=1
          Length = 98

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
 Frame = +1

Query: 43  AKVFVSSVTKPVSTNLSSSSRCKLAVDFTSQC--------PSCLLSSRPTPKYHV 183
           A++  S  T P +T  SS   C+  V   S C        P+C   +RP P YHV
Sbjct: 4   ARLCCSVPTSPATTICSSDKFCRCGVCLPSTCPHTVWLLQPTCCCDNRP-PPYHV 57


>sp|Q9RKL1|PUR7_STRCO
           Phosphoribosylaminoimidazole-succinocarboxamide synthase
           OS=Streptomyces coelicolor GN=purC PE=3 SV=1
          Length = 299

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -3

Query: 118 QPVYTVRMKRDWCSPA---WSHSKRRPWPPLPFQ 26
           QP Y  +  RDW + A   W     +P PPLP Q
Sbjct: 244 QPSYDKQFVRDWLTSAESGWDRKSEQPPPPLPQQ 277
tr_hit_id B6NFV0
Definition tr|B6NFV0|B6NFV0_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 68
Score (bit) 34.7
E-value 3.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953471|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_N17, 5'
         (528 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6NFV0|B6NFV0_BRAFL Putative uncharacterized protein OS=Branc...    35   3.1  
tr|A4J7S3|A4J7S3_DESRM Type III restriction enzyme, res subunit ...    34   4.0  
tr|Q9FIR4|Q9FIR4_ARATH Arabidopsis thaliana genomic DNA, chromos...    34   4.0  
tr|Q0WLS8|Q0WLS8_ARATH Putative uncharacterized protein At5g2471...    34   4.0  
tr|Q2UQC9|Q2UQC9_ASPOR Predicted protein OS=Aspergillus oryzae G...    34   4.0  
tr|B8MZQ1|B8MZQ1_ASPFL Putative uncharacterized protein OS=Asper...    34   4.0  
tr|Q58S81|Q58S81_9PSED 1,2,4-benzenetriol 1,2-dioxygenase (Fragm...    34   5.2  
tr|Q4SQF0|Q4SQF0_TETNG Chromosome 4 SCAF14533, whole genome shot...    34   5.3  
tr|Q4S2J7|Q4S2J7_TETNG Chromosome 17 SCAF14760, whole genome sho...    34   5.3  
tr|Q6D2H5|Q6D2H5_ERWCT Subunit S of type I restriction-modificat...    33   6.9  
tr|Q1GJF7|Q1GJF7_SILST Methyl-accepting chemotaxis sensory trans...    33   6.9  
tr|A9TXU9|A9TXU9_PHYPA Predicted protein OS=Physcomitrella paten...    33   6.9  
tr|A7ECR7|A7ECR7_SCLS1 Putative uncharacterized protein OS=Scler...    33   8.8  
tr|Q6PA13|Q6PA13_XENLA MGC68827 protein OS=Xenopus laevis GN=sp4...    33   9.0  
tr|B6MTQ0|B6MTQ0_BRAFL Putative uncharacterized protein OS=Branc...    33   9.0  
tr|A8NY53|A8NY53_COPC7 Putative uncharacterized protein OS=Copri...    33   9.0  

>tr|B6NFV0|B6NFV0_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_127392 PE=4 SV=1
          Length = 1187

 Score = 34.7 bits (78), Expect = 3.1
 Identities = 22/68 (32%), Positives = 32/68 (47%)
 Frame = +1

Query: 187 SLASLQAEFPEPDREDDPVKDMPSELTSNKEDLSQGELSLTDIHRVLVAPVEHLKESWNQ 366
           S A L    PE   E    +D  +    NKE L    L  T +    V+PV  LK+SW++
Sbjct: 243 SFARLSVYIPESSHESSQSQDSENNAPDNKESLP---LLNTFLQSRDVSPVRSLKKSWSE 299

Query: 367 VSELSREQ 390
            S+ S+ +
Sbjct: 300 SSDRSKRR 307


>tr|A4J7S3|A4J7S3_DESRM Type III restriction enzyme, res subunit
           OS=Desulfotomaculum reducens (strain MI-1) GN=Dred_2616
           PE=4 SV=1
          Length = 459

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = +1

Query: 133 QCPSCLLSSRPTPKYHVLSLASLQAEFPEPD-REDDPVKDMPSELTSNKEDLSQGELSLT 309
           QCP C  + RP P   +        E  EPD R+ + VK    E    K+++ Q   ++T
Sbjct: 370 QCPKCYAAHRPAPVCPLCGYQYAPTERAEPDKRQGELVKVDEIERQRKKQEIRQAR-NIT 428

Query: 310 DIHRVLVAPVEHLKESW-NQVSELSR 384
           D+  + +      K  W N+++EL R
Sbjct: 429 DLEEIALR--RGYKLGWINKMAELKR 452


>tr|Q9FIR4|Q9FIR4_ARATH Arabidopsis thaliana genomic DNA, chromosome
            5, P1 clone:MXC17 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 1003

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 25/90 (27%), Positives = 43/90 (47%)
 Frame = +1

Query: 10   VKK*NSGTAMEAKVFVSSVTKPVSTNLSSSSRCKLAVDFTSQCPSCLLSSRPTPKYHVLS 189
            V+K  S     A  F++S+  P  T+LS +SR K  ++      S + +S   PK  +L+
Sbjct: 764  VEKAPSSKTDAASAFLASLEDPKLTSLSDASR-KPPIEILPPGMSSIFASITAPKKPLLT 822

Query: 190  LASLQAEFPEPDREDDPVKDMPSELTSNKE 279
              + Q E  +P   ++P K +  E   + E
Sbjct: 823  QKTAQPEVAKPLALEEPTKPLAIEAPPSSE 852


>tr|Q0WLS8|Q0WLS8_ARATH Putative uncharacterized protein At5g24710
            OS=Arabidopsis thaliana GN=At5g24710 PE=2 SV=1
          Length = 1377

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 25/90 (27%), Positives = 43/90 (47%)
 Frame = +1

Query: 10   VKK*NSGTAMEAKVFVSSVTKPVSTNLSSSSRCKLAVDFTSQCPSCLLSSRPTPKYHVLS 189
            V+K  S     A  F++S+  P  T+LS +SR K  ++      S + +S   PK  +L+
Sbjct: 1138 VEKAPSSKTDAASAFLASLEDPKLTSLSDASR-KPPIEILPPGMSSIFASITAPKKPLLT 1196

Query: 190  LASLQAEFPEPDREDDPVKDMPSELTSNKE 279
              + Q E  +P   ++P K +  E   + E
Sbjct: 1197 QKTAQPEVAKPLALEEPTKPLAIEAPPSSE 1226


>tr|Q2UQC9|Q2UQC9_ASPOR Predicted protein OS=Aspergillus oryzae
           GN=AO090005001301 PE=4 SV=1
          Length = 220

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
 Frame = +1

Query: 154 SSRPTPKYHVLSLASLQAEFPEPDREDDPVKDMPSELTSNKEDLSQGEL---SLTDIHRV 324
           S+ P        +A+L +  P P      +KD+P+E +S K  + + +    SL D+HR 
Sbjct: 123 SAAPGSASAAAEIAALSSNAPPPL----DIKDLPTEASSIKIRIQKAQAVVESLPDVHRS 178

Query: 325 LVAPVEHLKESWNQVSELSREQGEVTRR 408
           +V   + +KE  +++S L     +  RR
Sbjct: 179 VVEQEKEIKELEHRISRLKSVISDFGRR 206


>tr|B8MZQ1|B8MZQ1_ASPFL Putative uncharacterized protein
           OS=Aspergillus flavus NRRL3357 GN=AFLA_085410 PE=4 SV=1
          Length = 220

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
 Frame = +1

Query: 154 SSRPTPKYHVLSLASLQAEFPEPDREDDPVKDMPSELTSNKEDLSQGEL---SLTDIHRV 324
           S+ P        +A+L +  P P      +KD+P+E +S K  + + +    SL D+HR 
Sbjct: 123 SAAPGSASAAAEIAALSSNAPPPL----DIKDLPTEASSIKIRIQKAQAVVESLPDVHRS 178

Query: 325 LVAPVEHLKESWNQVSELSREQGEVTRR 408
           +V   + +KE  +++S L     +  RR
Sbjct: 179 VVEQEKEIKELEHRISRLKSVISDFGRR 206


>tr|Q58S81|Q58S81_9PSED 1,2,4-benzenetriol 1,2-dioxygenase
           (Fragment) OS=Pseudomonas sp. PNP4 PE=4 SV=1
          Length = 171

 Score = 33.9 bits (76), Expect = 5.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 106 TVRMKRDWCSPAWSHSKRRPWP 41
           ++R +R WC+  WS S  RPWP
Sbjct: 48  SLRARRRWCADGWSTSTARPWP 69


>tr|Q4SQF0|Q4SQF0_TETNG Chromosome 4 SCAF14533, whole genome shotgun
           sequence. (Fragment) OS=Tetraodon nigroviridis
           GN=GSTENG00014400001 PE=4 SV=1
          Length = 619

 Score = 33.9 bits (76), Expect = 5.3
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
 Frame = +1

Query: 28  GTAMEAKVFVSSVTKPVSTNLSSSSRC-KLAVDFTSQCPSCLLSSRPTPKYHVLSLASLQ 204
           G  +E K  V+SVT  +   L       KL ++   Q PS    S+P P    L+ ++L 
Sbjct: 157 GIDLEDKENVASVTSVIKAVLDGVKELVKLTIEKQEQ-PSPTTPSKPAPPASALAESNLS 215

Query: 205 AEFPEPDREDDPVK--DMPSELTSNKED 282
            E P  DRE +  K    P E  S+  D
Sbjct: 216 VEVPSIDREQEVSKKTSSPVETASDTPD 243


>tr|Q4S2J7|Q4S2J7_TETNG Chromosome 17 SCAF14760, whole genome
           shotgun sequence OS=Tetraodon nigroviridis
           GN=GSTENG00025050001 PE=3 SV=1
          Length = 969

 Score = 33.9 bits (76), Expect = 5.3
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +1

Query: 241 VKDMPSELTSNKEDLSQGELSLTDIHRV---LVAPVEHLKESWNQVSELSREQGEVTRRR 411
           ++DM   LT  +E  SQ E  L D HR+   L   VE LKE  +  +EL  E+ +  RRR
Sbjct: 677 MEDMRLALTEQEETQSQMEQMLEDKHRLIQELSDEVEKLKEMSSAWNELCTEKHQAERRR 736


>tr|Q6D2H5|Q6D2H5_ERWCT Subunit S of type I restriction-modification
           system OS=Erwinia carotovora subsp. atroseptica GN=hsdS
           PE=4 SV=1
          Length = 551

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
 Frame = +1

Query: 196 SLQAEFPEPDREDDPVKDMPSELTSNKEDLSQGELSLTDIHRVLVAPV----------EH 345
           S    FP P RE + + D  +EL S  + L Q  L+  D H+ LV  +          E 
Sbjct: 252 SFLVPFP-PQREQERINDKAAELMSLCDQLEQQSLTSLDAHQQLVETLLATLVDSQHAEE 310

Query: 346 LKESWNQVSE 375
           L E+W ++S+
Sbjct: 311 LAENWARISQ 320