DK953472 |
Clone id |
TST39A01NGRL0017_N18 |
Library |
TST39 |
Length |
619 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_N18. 5' end sequence. |
Accession |
DK953472 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1179Contig1 |
Sequence |
CAAAGGTGGAAGAGGCTCCAGGGCCCATAGCCCTTGAGAAGGCACCGAAGAAGCCAGATA AGGAAATGCCAGCGGTACTGGACTGCTGGTGGCACTTTACGGAATGTACCAGTGGGTGCA GGACGTAGGAAAAACAAGCATTCTGCTTCACATCAAAAACATGGTATTGTTTCTGATGCT TTACAAGTACGTACTAGTGCGCCTGATGTGGCACGCAACAGGTTCTGCGGTGCTAGCATT TCCCCGGGCACAATCCTCAGTTCAAAGCCAAGGCTGCACGTTCTACCTTTAGATACACAA TCTATACCTACCTCGGATAGCCCTTTAGCTAATAGTAGAATGCTTAGTTTTGGTCAAGAG AGCCCTCTTTGCAAAAGTATGGCTGCAACTACGCTAGGATTACAGGAGAATGCAACCTTG CAGAATCGTGGAGGCATCCATGTTGATGGTGCCATGGGAGCTGATGTCACATTTGCACTT GGTGGCAAAGACACGTCAGAGCTTGAAGATTGCACAATATCAGGAAAAATTTCACCTCCA AGCTGCCAAACAGGTATGAACAATGCCACGATTGCAGCTGGAGGCCAACCCCAAGAAGAT GAGCCTACTCTAACTGCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LFV3 |
Definition |
sp|Q8LFV3|DOF33_ARATH Dof zinc finger protein DOF3.3 OS=Arabidopsis thaliana |
Align length |
53 |
Score (bit) |
73.2 |
E-value |
1.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5CAA8 |
Definition |
tr|A5CAA8|A5CAA8_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
180 |
Score (bit) |
87.8 |
E-value |
5.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953472|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_N18, 5' (619 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5CAA8|A5CAA8_VITVI Putative uncharacterized protein OS=Vitis... 88 5e-16 tr|Q0GLD2|Q0GLD2_SOYBN Dof20 (Fragment) OS=Glycine max PE=2 SV=1 80 1e-13 tr|A7PDL2|A7PDL2_VITVI Chromosome chr17 scaffold_12, whole genom... 77 6e-13 tr|A7QRG2|A7QRG2_VITVI Chromosome chr8 scaffold_150, whole genom... 77 8e-13 tr|Q5NBA7|Q5NBA7_ORYSJ Putative ascorbate oxidase promoter-bindi... 75 4e-12 tr|Q0JNV4|Q0JNV4_ORYSJ Os01g0264000 protein (Putative uncharacte... 75 4e-12 tr|B8AC63|B8AC63_ORYSI Putative uncharacterized protein OS=Oryza... 75 4e-12 tr|B2LUU3|B2LUU3_ORYSI Dof-type zinc finger protein (Fragment) O... 75 4e-12 tr|A9RZ17|A9RZ17_PHYPA Predicted protein OS=Physcomitrella paten... 75 4e-12 tr|A7PMX9|A7PMX9_VITVI Chromosome chr14 scaffold_21, whole genom... 75 4e-12 tr|Q9ZSM2|Q9ZSM2_9ASPA Putative DNA-binding protein (Fragment) O... 73 1e-11 tr|Q39540|Q39540_CUCMA AOBP (Ascorbate oxidase promoter-binding ... 73 1e-11 tr|A5AJU8|A5AJU8_VITVI Putative uncharacterized protein OS=Vitis... 73 1e-11 tr|Q0GLC4|Q0GLC4_SOYBN Dof27 OS=Glycine max PE=2 SV=1 72 3e-11 tr|B6SY12|B6SY12_MAIZE Putative uncharacterized protein OS=Zea m... 69 2e-10 tr|A2Q4B2|A2Q4B2_MEDTR Zinc finger, Dof-type OS=Medicago truncat... 69 3e-10 tr|B7FLM6|B7FLM6_MEDTR Putative uncharacterized protein OS=Medic... 68 5e-10 tr|Q5XF25|Q5XF25_ARATH At5g39660 OS=Arabidopsis thaliana PE=2 SV=1 67 6e-10 tr|Q14DX9|Q14DX9_PICAB Dof domain zinc finger DNA-binding protei... 67 8e-10 tr|A9NWA4|A9NWA4_PICSI Putative uncharacterized protein OS=Picea... 67 1e-09 tr|B6ZAF7|B6ZAF7_HELPE Cycling DOF factor 2 (Fragment) OS=Helian... 64 7e-09 tr|B6ZAE9|B6ZAE9_HELAN Cycling DOF factor 2 (Fragment) OS=Helian... 64 7e-09 tr|B6ZAE3|B6ZAE3_HELAN Cycling DOF factor 2 (Fragment) OS=Helian... 64 7e-09 tr|B6ZAE2|B6ZAE2_HELAN Cycling DOF factor 2 (Fragment) OS=Helian... 64 7e-09 tr|B6ZAD9|B6ZAD9_HELAN Cycling DOF factor 2 (Fragment) OS=Helian... 64 7e-09 tr|B6ZAD8|B6ZAD8_HELAN Cycling DOF factor 2 (Fragment) OS=Helian... 64 7e-09 tr|B6ZAD6|B6ZAD6_HELAN Cycling DOF factor 2 (Fragment) OS=Helian... 64 7e-09 tr|B6ZAD5|B6ZAD5_HELAN Cycling DOF factor 2 (Fragment) OS=Helian... 64 7e-09 tr|B6ZAD2|B6ZAD2_HELAN Cycling DOF factor 2 (Fragment) OS=Helian... 64 7e-09 tr|B6ZAD0|B6ZAD0_HELAN Cycling DOF factor 2 (Fragment) OS=Helian... 64 7e-09
>tr|A5CAA8|A5CAA8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035904 PE=4 SV=1 Length = 473
Score = 87.8 bits (216), Expect = 5e-16 Identities = 62/180 (34%), Positives = 84/180 (46%), Gaps = 3/180 (1%) Frame = +1
Query: 61 RKCQRYWTAGGTLRNVPVGAGRRKNKHSASHQKHGIVSDALQVRTSAPDVARNRFCGASI 240 + CQRYWTAGGT+RNVPVGAGRRKNK+SASH +H +S+ALQ Sbjct: 149 KSCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALQT----------------- 191
Query: 241 SPGTILSSKPRLHVLPLDTQSIPTSDSPLANSRMLSFGQESPLCKSMAATTLGLQENATL 420 + + + PT S N +L+FG ++P C SM + L L+E Sbjct: 192 -----------VQIEATNGVHQPTLKS---NGTVLTFGSDAPFCDSM-TSVLNLEEKKMP 236
Query: 421 QN-RGGIHVDGAMGADVTFAL--GGKDTSELEDCTISGKISPPSCQTGMNNATIAAGGQP 591 R G H G V+F + G D S T+S S + G++ A + G P Sbjct: 237 NGARNGFHTHKEQGIPVSFRVQENGDDHSSASSITVSNS-SEEGSKYGLHEAKRNSHGVP 295
>tr|Q0GLD2|Q0GLD2_SOYBN Dof20 (Fragment) OS=Glycine max PE=2 SV=1 Length = 303
Score = 80.1 bits (196), Expect = 1e-13 Identities = 55/159 (34%), Positives = 73/159 (45%), Gaps = 5/159 (3%) Frame = +1
Query: 61 RKCQRYWTAGGTLRNVPVGAGRRKNKHSASHQKHGIVSDALQVRTSAPDVARNRFCGASI 240 + CQRYWTAGGT+RNVPVGAGRRKNK+S SH +H +S+ALQ Sbjct: 10 KACQRYWTAGGTMRNVPVGAGRRKNKNSTSHYRHITISEALQAAR--------------- 54
Query: 241 SPGTILSSKPRLHVLPLDTQSIPTSDSPLANSRMLSFGQE--SPLCKSMAATTLGLQENA 414 +D Q+ + N R+LSFG + +P+C SMA+ ++ A Sbjct: 55 ----------------IDAQNGTHLPTLKGNGRVLSFGLDAHAPICDSMASLMNLGEKKA 98
Query: 415 TLQNRGGIH---VDGAMGADVTFALGGKDTSELEDCTIS 522 R G H D + G D+S TIS Sbjct: 99 LNGTRNGFHHGFEDQRLPVPCKSGENGDDSSTTSSITIS 137
>tr|A7PDL2|A7PDL2_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016324001 PE=4 SV=1 Length = 367
Score = 77.4 bits (189), Expect = 6e-13 Identities = 46/110 (41%), Positives = 58/110 (52%), Gaps = 1/110 (0%) Frame = +1
Query: 61 RKCQRYWTAGGTLRNVPVGAGRRKNKHSASHQKHGIVSDALQ-VRTSAPDVARNRFCGAS 237 + CQRYWTAGGT+RNVPVGAGRRKNK+SASH +H +S+ALQ VR A + Sbjct: 142 KSCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALQTVRIEATNGVHQ------ 195
Query: 238 ISPGTILSSKPRLHVLPLDTQSIPTSDSPLANSRMLSFGQESPLCKSMAA 387 PT S N +L+FG ++P C SM + Sbjct: 196 -----------------------PTLKS---NGTVLTFGSDAPFCDSMTS 219
>tr|A7QRG2|A7QRG2_VITVI Chromosome chr8 scaffold_150, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003807001 PE=4 SV=1 Length = 420
Score = 77.0 bits (188), Expect = 8e-13 Identities = 48/117 (41%), Positives = 63/117 (53%), Gaps = 1/117 (0%) Frame = +1
Query: 61 RKCQRYWTAGGTLRNVPVGAGRRKNKHSASHQKHGIVSDALQVRTSAPDVARNRFCGASI 240 + CQRYWTAGGT+RNVPVGAGRRKNKH AS + Q+ S+ V Sbjct: 57 KNCQRYWTAGGTMRNVPVGAGRRKNKHLASQYR--------QIMVSSDGV---------- 98
Query: 241 SPGTILSSKPRLHVLPLDTQSIPTSDSP-LANSRMLSFGQESPLCKSMAATTLGLQE 408 P T++ + + L T+ P A+ +L FG E+PLCKSM T L ++E Sbjct: 99 -PTTVIEASDSSNQQILSCGETSTTFRPSTASGTVLKFGPEAPLCKSM-ETVLSIRE 153
>tr|Q5NBA7|Q5NBA7_ORYSJ Putative ascorbate oxidase promoter-binding protein AOBP OS=Oryza sativa subsp. japonica GN=P0453A06.11 PE=4 SV=1 Length = 496
Score = 74.7 bits (182), Expect = 4e-12 Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 3/178 (1%) Frame = +1
Query: 61 RKCQRYWTAGGTLRNVPVGAGRRKNKHSASHQKHGIVSDALQVRTSAPD--VARNRFCGA 234 + CQRYWTAGGT+RNVPVGAGRRK+K S+ H +H ++ APD + Sbjct: 133 KNCQRYWTAGGTMRNVPVGAGRRKSKSSSLHYRHLLM---------APDCMMGSRVEISK 183
Query: 235 SISPGTILSSKPRLHVLPLDTQSIPTSDSPLA-NSRMLSFGQESPLCKSMAATTLGLQEN 411 S++P S+ H P+ P+ N +L FG E PLC+SM A+ L +QE Sbjct: 184 SMNPEAFASA----HSTPI---------QPIGRNETVLKFGPEVPLCESM-ASVLNIQEQ 229
Query: 412 ATLQNRGGIHVDGAMGADVTFALGGKDTSELEDCTISGKISPPSCQTGMNNATIAAGG 585 +G A V +D S + T + + Q N+ + G Sbjct: 230 -----------NGTNAAAVPTGENQEDNSCISSITSHNVLPENAAQVDKNSTPVYCNG 276
>tr|Q0JNV4|Q0JNV4_ORYSJ Os01g0264000 protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=Os01g0264000 PE=4 SV=1 Length = 551
Score = 74.7 bits (182), Expect = 4e-12 Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 3/178 (1%) Frame = +1
Query: 61 RKCQRYWTAGGTLRNVPVGAGRRKNKHSASHQKHGIVSDALQVRTSAPD--VARNRFCGA 234 + CQRYWTAGGT+RNVPVGAGRRK+K S+ H +H ++ APD + Sbjct: 196 KNCQRYWTAGGTMRNVPVGAGRRKSKSSSLHYRHLLM---------APDCMMGSRVEISK 246
Query: 235 SISPGTILSSKPRLHVLPLDTQSIPTSDSPLA-NSRMLSFGQESPLCKSMAATTLGLQEN 411 S++P S+ H P+ P+ N +L FG E PLC+SM A+ L +QE Sbjct: 247 SMNPEAFASA----HSTPI---------QPIGRNETVLKFGPEVPLCESM-ASVLNIQEQ 292
Query: 412 ATLQNRGGIHVDGAMGADVTFALGGKDTSELEDCTISGKISPPSCQTGMNNATIAAGG 585 +G A V +D S + T + + Q N+ + G Sbjct: 293 -----------NGTNAAAVPTGENQEDNSCISSITSHNVLPENAAQVDKNSTPVYCNG 339
>tr|B8AC63|B8AC63_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01281 PE=4 SV=1 Length = 507
Score = 74.7 bits (182), Expect = 4e-12 Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 3/178 (1%) Frame = +1
Query: 61 RKCQRYWTAGGTLRNVPVGAGRRKNKHSASHQKHGIVSDALQVRTSAPD--VARNRFCGA 234 + CQRYWTAGGT+RNVPVGAGRRK+K S+ H +H ++ APD + Sbjct: 196 KNCQRYWTAGGTMRNVPVGAGRRKSKSSSLHYRHLLM---------APDCMMGSRVEISK 246
Query: 235 SISPGTILSSKPRLHVLPLDTQSIPTSDSPLA-NSRMLSFGQESPLCKSMAATTLGLQEN 411 S++P S+ H P+ P+ N +L FG E PLC+SM A+ L +QE Sbjct: 247 SMNPEAFASA----HSTPI---------QPIGRNETVLKFGPEVPLCESM-ASVLNIQEQ 292
Query: 412 ATLQNRGGIHVDGAMGADVTFALGGKDTSELEDCTISGKISPPSCQTGMNNATIAAGG 585 +G A V +D S + T + + Q N+ + G Sbjct: 293 -----------NGTNAAAVPTGENQEDNSCISSITSHNVLPENAAQVDKNSTPVYCNG 339
>tr|B2LUU3|B2LUU3_ORYSI Dof-type zinc finger protein (Fragment) OS=Oryza sativa subsp. indica PE=4 SV=1 Length = 313
Score = 74.7 bits (182), Expect = 4e-12 Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 3/178 (1%) Frame = +1
Query: 61 RKCQRYWTAGGTLRNVPVGAGRRKNKHSASHQKHGIVSDALQVRTSAPD--VARNRFCGA 234 + CQRYWTAGGT+RNVPVGAGRRK+K S+ H +H ++ APD + Sbjct: 11 KNCQRYWTAGGTMRNVPVGAGRRKSKSSSLHYRHLLM---------APDCMMGSRVEISK 61
Query: 235 SISPGTILSSKPRLHVLPLDTQSIPTSDSPLA-NSRMLSFGQESPLCKSMAATTLGLQEN 411 S++P S+ H P+ P+ N +L FG E PLC+SM A+ L +QE Sbjct: 62 SMNPEAFASA----HSTPI---------QPIGRNETVLKFGPEVPLCESM-ASVLNIQEQ 107
Query: 412 ATLQNRGGIHVDGAMGADVTFALGGKDTSELEDCTISGKISPPSCQTGMNNATIAAGG 585 +G A V +D S + T + + Q N+ + G Sbjct: 108 -----------NGTNAAAVPTGENQEDNSCISSITSHNVLPENAAQVDKNSTPVYCNG 154
>tr|A9RZ17|A9RZ17_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161886 PE=4 SV=1 Length = 733
Score = 74.7 bits (182), Expect = 4e-12 Identities = 43/93 (46%), Positives = 58/93 (62%) Frame = +1
Query: 61 RKCQRYWTAGGTLRNVPVGAGRRKNKHSASHQKHGIVSDALQVRTSAPDVARNRFCGASI 240 + CQRYWTAGGTLRNVPVGAGRRK KH SH +HG + D R + D+A +R C + Sbjct: 323 KNCQRYWTAGGTLRNVPVGAGRRKTKHGNSHVRHGGLLDIPAARQDS-DMALSRPC---L 378
Query: 241 SPGTILSSKPRLHVLPLDTQSIPTSDSPLANSR 339 S G S ++ LP + S P++ + L +S+ Sbjct: 379 SRGA--SVPDQVSPLPASSSSSPSTITSLPSSQ 409
>tr|A7PMX9|A7PMX9_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020987001 PE=4 SV=1 Length = 268
Score = 74.7 bits (182), Expect = 4e-12 Identities = 32/43 (74%), Positives = 38/43 (88%) Frame = +1
Query: 61 RKCQRYWTAGGTLRNVPVGAGRRKNKHSASHQKHGIVSDALQV 189 + CQRYWTAGGT+RNVPVGAGRRKNK+S SH +H VS+ALQ+ Sbjct: 81 KNCQRYWTAGGTMRNVPVGAGRRKNKNSTSHYRHITVSEALQI 123
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