DK953490 [AcEST]

DK953490
Clone id	TST39A01NGRL0017_O12
Library	TST39
Length	552
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_O12. 5' end sequence.
Accession	DK953490
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL1714Contig1
Sequence	TTTTTTCTTGTTTAGCTCGACAAGTGCATTCTCTTAATTTGACAGTTGGATCTGTGGTCG ATCGCTTGTTTGCTCGATCTGCTAACTACCCATTGTCCGCTTGCTTCTCAAATTTCCCTG TACATTGACCTTACCGCAGTCTCGATGAGGGATCCTTTGTGCTTTCGGCACAGTGAACAT GGCGATTTTTTGCTTTTAGGCAGCTCATTTGAAGGTCTCAAAGAAGACTCATCTCATCAA AGCACAAATTGAAGAATCTTCCCGCTATCAGTGCAATGCTGGTCCAAGAAGAGCCCTCAA AACCCCCTGAAGCTTCAAAGCACAAGAATGAAGATGGCGATGAAGAGGAAGAAGAGGAGG ATAATGCAGCAGCTGCCCTTCTGCCTCCTGAGCCTTCTCAACACGAAAAGGGCCCTGGTA ATTGGGATAAATTCACAGAACACTTTCCCAAGCTAGTCATCTTTGCCCTTCTGTGCTTAA GTGCTTTCATTTTGATCCTTGTAAGAAACCGCAGCGAAACAGGGCGCCATTCTGTGCATT GAATCCCAACTC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK953490\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_O12, 5' (552 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A8FYV1
Definition	tr\|A8FYV1\|A8FYV1_SHESH Peptidase M17, leucyl aminopeptidase domain protein OS=Shewanella sediminis (strain HAW-EB3)
Align length	29
Score (bit)	34.7
E-value	3.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK953490\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_O12, 5' (552 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A8FYV1\|A8FYV1_SHESH Peptidase M17, leucyl aminopeptidase doma... 35 3.4 tr\|B6MTA6\|B6MTA6_BRAFL Putative uncharacterized protein OS=Branc... 34 6.0 >tr\|A8FYV1\|A8FYV1_SHESH Peptidase M17, leucyl aminopeptidase domain protein OS=Shewanella sediminis (strain HAW-EB3) GN=Ssed_3420 PE=4 SV=1 Length = 511 Score = 34.7 bits (78), Expect = 3.4 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -3 Query: 301 FEGSSWTSIALIAGRFFNLCFDEMSLLD 215 FEGS W ++ ++A CFDE+SLL D Sbjct: 16 FEGSGWDALVVVAADITQTCFDEISLLAD 44 >tr\|B6MTA6\|B6MTA6_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_86431 PE=4 SV=1 Length = 1386 Score = 33.9 bits (76), Expect = 6.0 Identities = 22/52 (42%), Positives = 31/52 (59%) Frame = +1 Query: 142 SMRDPLCFRHSEHGDFLLLGSSFEGLKEDSSHQSTNRIFPLSVQCWSKKSP 297 S RD L ++ SE GD+ LL S ++ SS +T R+ PLSV+C+S P Sbjct: 1325 SGRDGLTWQSSE-GDWHLLKSVVMKIRATSSLPTTEGRVGPLSVRCFSPPGP 1375