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NBDC - LSDB Archive
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DK953492
Clone id TST39A01NGRL0017_O15
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_O15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTTCTGCGTAAAATTGTCTGTGAGTGTGTAGAGAGGGAGATCGAGCAGGAATGGCCGCCG
CTACTGCTGCCACATCTCTTGCTTCGTCCTTCTTGGGCACCCAGGAGCTCTCAAACGGCG
TCAAGAGCGTGGGAGTGAGCAATGGGGCGCGTGTGGTAGCGAGGTTTGGGGGCAAGAAGG
GTGCGAAGGCAGCGCCCAGGAAGAGCAGCTCCGCAGGCAGCAAGGATCGGCCTCTGTGGT
ACCCCGGCTGCAAGCCCCCCGCATGGCTGGATGGCTCTCTTGTAGGCGACTATGGCTTCG
ACCCGCTCTCTCTGGCCAAGCCCGCAGAATATTTGCAGTTCGATTTCGACTCCTTGAACC
AGAACTTGGCCAAGAATTCTGCAGGGGAGATTATTTGGAAATCGCGTGGACAGCATCACC
AACATCAATGCCACTATCCAGCCCTACGCAGAAGCCTTTTGGTCTGCAGCGCTTCCGTGA
AATGCGAGCTCATCCATGGACGGGGGGCCA
■■Homology search results ■■ -
sp_hit_id Q07473
Definition sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana
Align length 95
Score (bit) 103.0
E-value 4.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953492|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_O15, 5'
         (510 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl...   103   4e-22
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl...   100   3e-21
sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl...    97   4e-20
sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29 OS=Chl...    67   6e-11
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...    64   5e-10
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...    62   2e-09
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    48   2e-05
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    48   3e-05
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    44   4e-04
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    44   6e-04
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    44   6e-04
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    43   0.001
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    43   0.001
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    43   0.001
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    42   0.001
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    40   0.005
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...    40   0.008
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    37   0.041
sp|Q6G1R9|TRMD_BARHE tRNA (guanine-N(1)-)-methyltransferase OS=B...    34   0.35 
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    34   0.46 
sp|Q8VH46|AFAP1_RAT Actin filament-associated protein 1 OS=Rattu...    33   0.59 
sp|Q75AS1|PEX21_ASHGO Peroxisomal membrane protein PEX21 OS=Ashb...    33   0.78 
sp|Q68SA9|ATS7_MOUSE A disintegrin and metalloproteinase with th...    31   2.9  
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    31   3.9  
sp|Q8WMR7|BEST1_PIG Bestrophin-1 (Fragment) OS=Sus scrofa GN=BES...    30   5.0  
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    30   5.0  
sp|Q6S6U0|ICP4_EHV1V Trans-acting transcriptional protein ICP4 O...    30   6.6  
sp|P17473|ICP4_EHV1K Trans-acting transcriptional protein ICP4 O...    30   6.6  
sp|P28925|ICP4_EHV1B Trans-acting transcriptional protein ICP4 O...    30   6.6  
sp|P02460|CO2A1_CHICK Collagen alpha-1(II) chain (Fragment) OS=G...    30   6.6  

>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=2
           SV=1
          Length = 290

 Score =  103 bits (258), Expect = 4e-22
 Identities = 53/95 (55%), Positives = 59/95 (62%)
 Frame = +3

Query: 225 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIWKS 404
           DRPLWYPG   P WLDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++I   
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 113

Query: 405 RGQHHQHQCHYPALRRSLLVCSASVKCELIHGRGA 509
                     +      +       +CELIHGR A
Sbjct: 114 TEAADAKSTPFQPY-SEVFGIQRFRECELIHGRWA 147


>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1
           SV=1
          Length = 287

 Score =  100 bits (250), Expect = 3e-21
 Identities = 52/95 (54%), Positives = 59/95 (62%)
 Frame = +3

Query: 225 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIWKS 404
           DRPLW+PG K P +LDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN  GE+I   
Sbjct: 51  DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTR 110

Query: 405 RGQHHQHQCHYPALRRSLLVCSASVKCELIHGRGA 509
                     +      +       +CELIHGR A
Sbjct: 111 TEAVDPKSTPFQPY-SEVFGLQRFRECELIHGRWA 144


>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=2
           SV=1
          Length = 276

 Score = 97.1 bits (240), Expect = 4e-20
 Identities = 48/95 (50%), Positives = 59/95 (62%)
 Frame = +3

Query: 225 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIWKS 404
           DR +W+PG  PP WLDGS++GD GFDP  L KPAEYLQ+DFD L+QNLAKN AG+II   
Sbjct: 55  DRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGII 114

Query: 405 RGQHHQHQCHYPALRRSLLVCSASVKCELIHGRGA 509
           +         +      +       +CELIHGR A
Sbjct: 115 QESSEIKPTPFQPY-TEVFGIQRFRECELIHGRWA 148


>sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29
           OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3
          Length = 280

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = +3

Query: 234 LWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIWKSRGQ 413
           LW P    P WLDGSL GD GFDPL L+KP+E++    D  +QN AKN+ G +    +  
Sbjct: 52  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQAT 111

Query: 414 HHQHQCHYPALRRSLLVCSASVK-CELIHGRGA 509
             +          S +   A  + CELIHGR A
Sbjct: 112 PDEVSSENRLAPYSEVFGLARFRECELIHGRWA 144


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = +3

Query: 225 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFD 344
           DRPLW+PG  PP WLDGSL GD+GFDPL LA   E L+++
Sbjct: 64  DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWN 103


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = +3

Query: 225 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFD 344
           DRPLW+PG  PP WLDGSL GD+GFDPL L    E L+++
Sbjct: 64  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWN 103


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +3

Query: 225 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKP 323
           DRPLW+   +  ++LDGSL GDYGFDPL L+ P
Sbjct: 54  DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDP 86


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 21/35 (60%), Positives = 27/35 (77%)
 Frame = +3

Query: 237 WYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQF 341
           W PG + PA+LDGSL GD GFDPL+LA+  E L++
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRW 70


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = +3

Query: 258 PAWLDGSLVGDYGFDPLSLAKPAEYLQF 341
           P WLDGSL GDYGFDPL L K   +L++
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKW 95


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
 Frame = +3

Query: 237 WYPGCK------PPAWLDGSLVGDYGFDPLSLAKPAEYLQF 341
           W P  K       P WLDGSL GD+GFDPL L K   +L++
Sbjct: 60  WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKW 100
tr_hit_id B7FIZ5
Definition tr|B7FIZ5|B7FIZ5_MEDTR Putative uncharacterized protein OS=Medicago truncatula
Align length 124
Score (bit) 110.0
E-value 5.0e-23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953492|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_O15, 5'
         (510 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7FIZ5|B7FIZ5_MEDTR Putative uncharacterized protein OS=Medic...   110   5e-23
tr|B1N8L8|B1N8L8_BRAOG Chloroplast chlorophyll a/b-binding prote...   108   2e-22
tr|Q9XQB2|Q9XQB2_PHAAU Chlorophyll a/b binding protein CP29 OS=P...   107   4e-22
tr|A9U3M1|A9U3M1_PHYPA Predicted protein OS=Physcomitrella paten...   104   2e-21
tr|A9T2F8|A9T2F8_PHYPA Predicted protein OS=Physcomitrella paten...   104   3e-21
tr|Q0WW97|Q0WW97_ARATH Lhcb4-protein OS=Arabidopsis thaliana GN=...   103   4e-21
tr|Q0PWS7|Q0PWS7_TOBAC Chloroplast pigment-binding protein CP29 ...   103   5e-21
tr|A9PIZ2|A9PIZ2_POPJC Putative uncharacterized protein OS=Popul...   102   8e-21
tr|A7PP40|A7PP40_VITVI Chromosome chr8 scaffold_23, whole genome...   102   1e-20
tr|A5C288|A5C288_VITVI Putative uncharacterized protein OS=Vitis...   102   1e-20
tr|A9PJF0|A9PJF0_POPJC Putative uncharacterized protein OS=Popul...   101   2e-20
tr|Q6Z411|Q6Z411_ORYSJ Os07g0558400 protein OS=Oryza sativa subs...   100   4e-20
tr|O65217|O65217_ORYSA Chlorophyll a/b-binding protein OS=Oryza ...   100   4e-20
tr|A2YML1|A2YML1_ORYSI Putative uncharacterized protein OS=Oryza...   100   4e-20
tr|B7SB30|B7SB30_BAMOL LHCB4 OS=Bambusa oldhamii PE=2 SV=1            100   7e-20
tr|B7SAW1|B7SAW1_9POAL Chloroplast chlorophyll a/b binding prote...    99   1e-19
tr|O24561|O24561_MAIZE Putative uncharacterized protein OS=Zea m...    97   6e-19
tr|B4FJG1|B4FJG1_MAIZE Putative uncharacterized protein OS=Zea m...    96   1e-18
tr|A9P071|A9P071_PICSI Putative uncharacterized protein OS=Picea...    96   1e-18
tr|A9NYR8|A9NYR8_PICSI Putative uncharacterized protein OS=Picea...    96   1e-18
tr|A9NKX0|A9NKX0_PICSI Putative uncharacterized protein OS=Picea...    96   1e-18
tr|A9PK34|A9PK34_POPJC Putative uncharacterized protein OS=Popul...    95   2e-18
tr|Q7XYQ5|Q7XYQ5_BIGNA Chlorophyll a/b-binding protein CP29 OS=B...    87   6e-16
tr|B5A4H8|B5A4H8_GYMST Chlorophyll a/b binding protein CP29 OS=G...    84   4e-15
tr|Q3B9U8|Q3B9U8_OSTTA Chloroplast chlorophyll a/b-binding prote...    82   1e-14
tr|O04822|O04822_SPOST Putative uncharacterized protein (Fragmen...    82   1e-14
tr|A4S8L5|A4S8L5_OSTLU Possibly CP29, chlorophyll a/b binding OS...    80   4e-14
tr|A9NLZ0|A9NLZ0_PICSI Putative uncharacterized protein OS=Picea...    74   3e-12
tr|A4QPJ4|A4QPJ4_ACEAT Chloroplast light-harvesting protein CP29...    74   3e-12
tr|A2SY24|A2SY24_MESVI Light-harvesting chlorophyll-a/b binding ...    71   3e-11

>tr|B7FIZ5|B7FIZ5_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 289

 Score =  110 bits (274), Expect = 5e-23
 Identities = 60/124 (48%), Positives = 70/124 (56%)
 Frame = +3

Query: 138 SNGARVVARFXXXXXXXXXXXXXXXXXXXDRPLWYPGCKPPAWLDGSLVGDYGFDPLSLA 317
           SN  R+ ARF                   DRPLW+PG K P WLDGSLVGDYGFDP  L 
Sbjct: 24  SNSGRIQARFGFGKKKAAPKKPSRSSPSTDRPLWFPGAKSPEWLDGSLVGDYGFDPFGLG 83

Query: 318 KPAEYLQFDFDSLNQNLAKNSAGEIIWKSRGQHHQHQCHYPALRRSLLVCSASVKCELIH 497
           KPAEYLQFD DSL+QNLAKN AG++I  +R +    +         +       +CELIH
Sbjct: 84  KPAEYLQFDLDSLDQNLAKNLAGDVI-GTRTEFADVKSTPFQPYSEVFGLQRFRECELIH 142

Query: 498 GRGA 509
           GR A
Sbjct: 143 GRWA 146


>tr|B1N8L8|B1N8L8_BRAOG Chloroplast chlorophyll a/b-binding protein
           (Fragment) OS=Brassica oleracea var. gemmifera PE=2 SV=1
          Length = 157

 Score =  108 bits (269), Expect = 2e-22
 Identities = 54/95 (56%), Positives = 61/95 (64%)
 Frame = +3

Query: 225 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIWKS 404
           DRPLWYPG K P WLDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++I   
Sbjct: 23  DRPLWYPGAKSPEWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 82

Query: 405 RGQHHQHQCHYPALRRSLLVCSASVKCELIHGRGA 509
             +       +      +       +CELIHGR A
Sbjct: 83  TEEAAPKSTPFQPY-SEVFGIQRFRECELIHGRWA 116


>tr|Q9XQB2|Q9XQB2_PHAAU Chlorophyll a/b binding protein CP29
           OS=Phaseolus aureus GN=CipCp29 PE=2 SV=1
          Length = 290

 Score =  107 bits (266), Expect = 4e-22
 Identities = 62/130 (47%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
 Frame = +3

Query: 138 SNGARVVARFXXXXXXXXXXXXXXXXXXXDRPLWYPGCKPPAWLDGSLVGDYGFDPLSLA 317
           S   R+ ARF                   DRPLWYPG K P WLDGSLVGDYGFDP  L 
Sbjct: 24  SGSGRIQARFGFGSKKKAAPKKVSKGPSTDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG 83

Query: 318 KPAEYLQFDFDSLNQNLAKNSAGEIIWKS------RGQHHQHQCHYPALRRSLLVCSASV 479
           KPAEYLQF+ DSL+QNLAKN AG II         +    Q       L+R         
Sbjct: 84  KPAEYLQFELDSLDQNLAKNEAGIIIGTRTEVADVKSTPFQPYSEVFGLQRFR------- 136

Query: 480 KCELIHGRGA 509
           +CELIHGR A
Sbjct: 137 ECELIHGRWA 146


>tr|A9U3M1|A9U3M1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_228001 PE=4 SV=1
          Length = 296

 Score =  104 bits (260), Expect = 2e-21
 Identities = 61/136 (44%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
 Frame = +3

Query: 120 VKSVGVSNGARVVARFXXXXXXXXXXXXXXXXXXX------DRPLWYPGCKPPAWLDGSL 281
           V+  GV NGARVVAR                          DRPLW+PG + P WLDGSL
Sbjct: 19  VECFGVKNGARVVARSSLGGKAKQVAKQASKTLKKSSGAGADRPLWFPGARAPEWLDGSL 78

Query: 282 VGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIWKSRGQHHQHQCHYPALRRSLL 461
            GDYGFDPLSL K  EYLQ + DSLNQNLAKN AG++I     +  +           + 
Sbjct: 79  PGDYGFDPLSLGKSPEYLQIELDSLNQNLAKNEAGDVIGTRISKKEEIAPTPFQPYSEVF 138

Query: 462 VCSASVKCELIHGRGA 509
                 +CELIHGR A
Sbjct: 139 GLQRFRECELIHGRWA 154


>tr|A9T2F8|A9T2F8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_218263 PE=4 SV=1
          Length = 296

 Score =  104 bits (259), Expect = 3e-21
 Identities = 60/136 (44%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
 Frame = +3

Query: 120 VKSVGVSNGARVVARFXXXXXXXXXXXXXXXXXXX------DRPLWYPGCKPPAWLDGSL 281
           V+ +GV NG+RVVARF                          RPLW+PG + P WLDGSL
Sbjct: 19  VERLGVQNGSRVVARFSVPGKAKQAAKAASKAVKKASGSGAGRPLWFPGAQAPEWLDGSL 78

Query: 282 VGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIWKSRGQHHQHQCHYPALRRSLL 461
            GDYGFDPLSL K  EYLQ + DSLNQNLAKN AG++I     +  +           + 
Sbjct: 79  PGDYGFDPLSLGKSPEYLQIELDSLNQNLAKNEAGDVIGTRISKKEEIAPTPFQPYSEVF 138

Query: 462 VCSASVKCELIHGRGA 509
                 +CELIHGR A
Sbjct: 139 GLQRFRECELIHGRWA 154


>tr|Q0WW97|Q0WW97_ARATH Lhcb4-protein OS=Arabidopsis thaliana
           GN=At5g01530 PE=2 SV=1
          Length = 290

 Score =  103 bits (258), Expect = 4e-21
 Identities = 53/95 (55%), Positives = 59/95 (62%)
 Frame = +3

Query: 225 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIWKS 404
           DRPLWYPG   P WLDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++I   
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 113

Query: 405 RGQHHQHQCHYPALRRSLLVCSASVKCELIHGRGA 509
                     +      +       +CELIHGR A
Sbjct: 114 TEAADAKSTPFQPY-SEVFGIQRFRECELIHGRWA 147


>tr|Q0PWS7|Q0PWS7_TOBAC Chloroplast pigment-binding protein CP29
           OS=Nicotiana tabacum GN=Lhcb4 PE=2 SV=1
          Length = 285

 Score =  103 bits (257), Expect = 5e-21
 Identities = 56/101 (55%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
 Frame = +3

Query: 225 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIWKS 404
           DRPLWYPG K P +LDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++I   
Sbjct: 47  DRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTR 106

Query: 405 ------RGQHHQHQCHYPALRRSLLVCSASVKCELIHGRGA 509
                 +    Q       L+R         +CELIHGR A
Sbjct: 107 TELADVKSTPFQPYSEVFGLQRFR-------ECELIHGRWA 140


>tr|A9PIZ2|A9PIZ2_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 285

 Score =  102 bits (255), Expect = 8e-21
 Identities = 60/124 (48%), Positives = 70/124 (56%)
 Frame = +3

Query: 138 SNGARVVARFXXXXXXXXXXXXXXXXXXXDRPLWYPGCKPPAWLDGSLVGDYGFDPLSLA 317
           SN  R+ ARF                   DRPLWYPG K P +LDGSLVGDYGFDP  L 
Sbjct: 23  SNSGRIQARFGFGGKKAPKKSIKPSTP--DRPLWYPGAKAPEYLDGSLVGDYGFDPFGLG 80

Query: 318 KPAEYLQFDFDSLNQNLAKNSAGEIIWKSRGQHHQHQCHYPALRRSLLVCSASVKCELIH 497
           KPAEYLQF+ DSL+QNLAKN AG+II  +R +    +         +       +CELIH
Sbjct: 81  KPAEYLQFELDSLDQNLAKNLAGDII-GTRTEFADVKSTPFQPYSEVFGLQRFRECELIH 139

Query: 498 GRGA 509
           GR A
Sbjct: 140 GRWA 143


>tr|A7PP40|A7PP40_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021499001
           PE=4 SV=1
          Length = 342

 Score =  102 bits (254), Expect = 1e-20
 Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
 Frame = +3

Query: 225 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEII-WK 401
           DRPLW+PG   P WLDG+LVGDYGFDP  L KPAEYLQ+D+DSL+QNLAKN AG++I  +
Sbjct: 106 DRPLWFPGAVAPEWLDGTLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNIAGDVIGTR 165

Query: 402 SRGQHHQHQCHYPALRRSLLVCSASVKCELIHGRGA 509
             G   +     P     +       +CELIHGR A
Sbjct: 166 FEGGEVKSTPFQP--YTEVFGLQRFRECELIHGRWA 199


>tr|A5C288|A5C288_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_010727 PE=4 SV=1
          Length = 288

 Score =  102 bits (254), Expect = 1e-20
 Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
 Frame = +3

Query: 225 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEII-WK 401
           DRPLW+PG   P WLDG+LVGDYGFDP  L KPAEYLQ+D+DSL+QNLAKN AG++I  +
Sbjct: 52  DRPLWFPGAVAPEWLDGTLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNIAGDVIGTR 111

Query: 402 SRGQHHQHQCHYPALRRSLLVCSASVKCELIHGRGA 509
             G   +     P     +       +CELIHGR A
Sbjct: 112 FEGGEVKSTPFQP--YTEVFGLQRFRECELIHGRWA 145