DK953518 |
Clone id |
TST39A01NGRL0017_P17 |
Library |
TST39 |
Length |
592 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_P17. 5' end sequence. |
Accession |
DK953518 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL201Contig1 |
Sequence |
AGCGAAGCCAGGTGAAGTCCAAACACAGACACGCACAGACAGAAGGAGGTTTCTACGAGC GAGTGAGCAACGTGTCCATGGCTGCCTCAACCTCTGCTGCTCTCTCCTTCTCAAACTTGG CGGCCGCGCGCTCCTCCTCCCTCACAGGTTCCCCTTTGAGCTCCACGAGGACACCTGCAA ATGTGAAGACTCAGGCCCCCTTGACATGCCGAGCCCAGAAAGCTTCAGATGGGGAGGCCC CTGCGGCGCCTATCTCTAGACGTGCTGTGATCTCCATAGCCGCCGCTGCTGCAGCTGCTG TTGCTGCCGTCTCCGCGCCCATTTACCCCGCGGAGGCAGCATATGGTGAATCAGCAAATA TCTTTGGTGCTCCCAAGTTTGACTCGGGGTTTGTTCCCTTCTCTGGCAATGGCTTCTCTG TAAATATTCCATCAAAGTGGAACCCTAGCAAGGAGCAAGAGTTCCCTGGCACTGTATTGC GCTATGAGGACAATTTTGATGCAAACAGCAACTTGGCAGTTATGGTTTTACCAGAAGGCA AGACCTCAATCAAGGACTACGGATCACCGGAGAAAGTTTTTGGAATCTGTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SLQ8 |
Definition |
sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus |
Align length |
81 |
Score (bit) |
125.0 |
E-value |
1.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953518|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_P17, 5' (592 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chlorop... 125 1e-28 sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chlorop... 120 5e-27 sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chlo... 120 5e-27 sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chlorop... 119 1e-26 sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chlorop... 118 2e-26 sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chlorop... 118 2e-26 sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chlorop... 117 3e-26 sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chlorop... 116 7e-26 sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chlo... 115 1e-25 sp|Q00434|PSBP_WHEAT Oxygen-evolving enhancer protein 2, chlorop... 114 3e-25 sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloropla... 113 6e-25 sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chlorop... 113 6e-25 sp|Q04127|PSBP3_TOBAC Oxygen-evolving enhancer protein 2-3, chlo... 112 1e-24 sp|P18212|PSBP2_TOBAC Oxygen-evolving enhancer protein 2-2, chlo... 112 1e-24 sp|P11471|PSBP_CHLRE Oxygen-evolving enhancer protein 2, chlorop... 104 3e-22 sp|P80660|PSBP1_PHYPA Oxygen-evolving enhancer protein 2 (Fragme... 39 0.015 sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS... 32 2.4 sp|P83687|PSBP_EUGGR Oxygen-evolving enhancer protein 2 (Fragmen... 31 4.0
>sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1 Length = 263
Score = 125 bits (315), Expect = 1e-28 Identities = 54/81 (66%), Positives = 72/81 (88%) Frame = +3
Query: 333 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 512 +AAYGE+AN+FG PK ++ ++P+SG+GF ++IPSKWNPSKE+EFPG VLRYEDNFD+NSN Sbjct: 76 DAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSN 135
Query: 513 LAVMVLPEGKTSIKDYGSPEK 575 L+V++ P K SIKD+GSPE+ Sbjct: 136 LSVIINPTDKKSIKDFGSPEE 156
>sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1 Length = 267
Score = 120 bits (301), Expect = 5e-27 Identities = 53/80 (66%), Positives = 68/80 (85%) Frame = +3
Query: 333 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 512 +AAYGE+AN+FG PK ++ F+P++G+GF + +PSKWNPSKE+EFPG VLRYEDNFDA SN Sbjct: 80 DAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSN 139
Query: 513 LAVMVLPEGKTSIKDYGSPE 572 L+V+V P K SI D+GSPE Sbjct: 140 LSVLVQPTDKKSITDFGSPE 159
>sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2 Length = 263
Score = 120 bits (301), Expect = 5e-27 Identities = 53/81 (65%), Positives = 67/81 (82%) Frame = +3
Query: 333 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 512 +AAYGE+AN+FG PK ++ F+P++G+GF V +P+KWNPSKE E+PG VLR+EDNFDA SN Sbjct: 76 DAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSN 135
Query: 513 LAVMVLPEGKTSIKDYGSPEK 575 L VMV P K SI DYGSPE+ Sbjct: 136 LNVMVTPTDKKSITDYGSPEE 156
>sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1 Length = 260
Score = 119 bits (297), Expect = 1e-26 Identities = 53/81 (65%), Positives = 66/81 (81%) Frame = +3
Query: 333 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 512 +AAYGE+AN+FG PK ++ F+P++G+GF + IP+KWNPSKE EFPG VLRYEDNFD+ SN Sbjct: 73 DAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVLRYEDNFDSTSN 132
Query: 513 LAVMVLPEGKTSIKDYGSPEK 575 L V V P K SI DYGSPE+ Sbjct: 133 LMVAVTPTDKKSITDYGSPEE 153
>sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2 Length = 260
Score = 118 bits (296), Expect = 2e-26 Identities = 53/81 (65%), Positives = 65/81 (80%) Frame = +3
Query: 333 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 512 +AAYGE+AN+FG PK ++ F +SG+GF V +P+KWNPS+E E+PG VLRYEDNFDA SN Sbjct: 73 DAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSN 132
Query: 513 LAVMVLPEGKTSIKDYGSPEK 575 L VMV P K SI DYGSPE+ Sbjct: 133 LNVMVTPTDKKSITDYGSPEE 153
>sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus GN=PSBP PE=2 SV=1 Length = 265
Score = 118 bits (296), Expect = 2e-26 Identities = 55/81 (67%), Positives = 64/81 (79%) Frame = +3
Query: 333 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 512 +AAYGESAN+FG PK ++ F +G+GF + IPSKWNPSKE EFPG VLRYEDNFD SN Sbjct: 78 DAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVEFPGQVLRYEDNFDTTSN 137
Query: 513 LAVMVLPEGKTSIKDYGSPEK 575 + VMV P K SIKDYGSPE+ Sbjct: 138 VGVMVNPTDKKSIKDYGSPEQ 158
>sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1 Length = 258
Score = 117 bits (294), Expect = 3e-26 Identities = 51/81 (62%), Positives = 66/81 (81%) Frame = +3
Query: 333 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 512 +AAYGE+AN+FG PK ++ F+P++G+GF + +P+KWNPSKE E+PG VLRYEDNFD+ SN Sbjct: 71 DAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVLRYEDNFDSTSN 130
Query: 513 LAVMVLPEGKTSIKDYGSPEK 575 L V V P K SI DYGSPE+ Sbjct: 131 LIVAVTPTDKKSITDYGSPEE 151
>sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) OS=Brassica juncea GN=PSBP PE=2 SV=1 Length = 217
Score = 116 bits (291), Expect = 7e-26 Identities = 52/81 (64%), Positives = 64/81 (79%) Frame = +3
Query: 333 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 512 +AAYGE+AN+FG PK ++ F +G+GF V +P+KWNPS+E E+PG VLRYEDNFDA SN Sbjct: 30 DAAYGEAANVFGKPKTNTDFTAINGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSN 89
Query: 513 LAVMVLPEGKTSIKDYGSPEK 575 L VMV P K SI DYGSPE+ Sbjct: 90 LNVMVTPTDKKSITDYGSPEE 110
>sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana tabacum GN=PSBP1 PE=3 SV=2 Length = 268
Score = 115 bits (289), Expect = 1e-25 Identities = 51/81 (62%), Positives = 65/81 (80%) Frame = +3
Query: 333 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 512 +AAYGE+AN+FG PK ++ F+ ++G+GF + +P+KWNPSKE EFPG VLRYEDNFD+ SN Sbjct: 81 DAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSN 140
Query: 513 LAVMVLPEGKTSIKDYGSPEK 575 L V V P K SI DYGSPE+ Sbjct: 141 LIVTVTPTDKKSITDYGSPEE 161
>sp|Q00434|PSBP_WHEAT Oxygen-evolving enhancer protein 2, chloroplastic OS=Triticum aestivum GN=PSBP PE=2 SV=1 Length = 258
Score = 114 bits (286), Expect = 3e-25 Identities = 52/80 (65%), Positives = 65/80 (81%) Frame = +3
Query: 336 AAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSNL 515 AAYGE+AN+FG K ++ FV +SG GF + IP+KWNPSKE+EFPG VLRYEDNFDA SNL Sbjct: 73 AAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNL 132
Query: 516 AVMVLPEGKTSIKDYGSPEK 575 +V++ P K +I DYGSPE+ Sbjct: 133 SVIINPTTKKTITDYGSPEE 152
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PHM0 |
Definition |
tr|A9PHM0|A9PHM0_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
81 |
Score (bit) |
129.0 |
E-value |
9.0e-29 |
Report |
|