DK953528 |
Clone id |
TST39A01NGRL0018_A05 |
Library |
TST39 |
Length |
587 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_A05. 5' end sequence. |
Accession |
DK953528 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL198Contig1 |
Sequence |
CTTCAGAAACGCAGAGGGTCAGAAATGACAATTGCGGGATTCTTGCCCTTAAGCGCCAAG CCCGTGCTTGATGAGGCCAGGCGCTTGTGTCCCGAGAGAAGCTTTCAAGGCGCCGTGTGC AGCATGGAGGGCACCATCGCCCACGAGGCAGCAGCAGCAGCCCAACAAGCGATGAACAAG GGCCCATCCACAGAGAGCTCGATCCCTGCTCCTCTGCGCGTTTCCTGTGACAATGGATCG GCCCCCTCCTCTACTCGCCTCGCATTTGTCTATGGTACCCTCAAGCGTGGCTTTGGCAAC CACTGGCTCATGGAGGAGCTCATGGCCGGGTCACATGCACATTTCCTAGGATATGCTCTC ACGAAGCGGCGCTTCCCCCTTGTCTGTGGCCCCTTCCAGGTGCCCTTTTTACTTCACTCA CCATCCCCTTCTGGTCATCACGTGCGCGGGGAGCTCTATCAAGTCGACTCGTTGGCCATA TCCAGACTTGATGAGCTCGAGGGTGTTGGTAAAGGTCATTATGAGCGCTGCCCAATTTAT GTTCGGATAATCTCCCCATTGCTTGATGCTGATACCCATCCAAGGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M8T3 |
Definition |
sp|Q9M8T3|U131_ARATH UPF0131 protein At3g02910 OS=Arabidopsis thaliana |
Align length |
98 |
Score (bit) |
117.0 |
E-value |
4.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953528|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_A05, 5' (587 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9M8T3|U131_ARATH UPF0131 protein At3g02910 OS=Arabidopsis th... 117 4e-26 sp|Q9W0Y2|YS11_DROME UPF0131 protein CG2811 OS=Drosophila melano... 71 3e-12 sp|Q4KM86|A2LD1_RAT AIG2-like domain-containing protein 1 OS=Rat... 68 3e-11 sp|Q923B0|A2LD1_MOUSE AIG2-like domain-containing protein 1 OS=M... 62 3e-09 sp|Q0VFX9|A2LD1_BOVIN AIG2-like domain-containing protein 1 OS=B... 61 5e-09 sp|Q9BVM4|A2LD1_HUMAN AIG2-like domain-containing protein 1 OS=H... 59 2e-08 sp|A3KNL6|A2LDB_DANRE AIG2-like domain-containing protein 1-B OS... 55 2e-07 sp|Q66I06|A2LDA_DANRE AIG2-like domain-containing protein 1-A OS... 54 4e-07 sp|A0JMM9|A2LDC_DANRE AIG2-like domain-containing protein 1-C OS... 54 8e-07 sp|Q9W0Y1|TINA1_DROME Troponin C-akin-1 protein OS=Drosophila me... 50 8e-06 sp|Q58909|Y1514_METJA UPF0131 protein MJ1514 OS=Methanocaldococc... 47 7e-05 sp|Q66KX0|A2LD1_XENLA AIG2-like domain-containing protein 1 OS=X... 42 0.003 sp|Q9KP33|Y2546_VIBCH UPF0131 protein VC_2546 OS=Vibrio cholerae... 40 0.007 sp|P39759|YKQA_BACSU UPF0131 protein ykqA OS=Bacillus subtilis G... 32 1.8 sp|Q72E47|SYV_DESVH Valyl-tRNA synthetase OS=Desulfovibrio vulga... 32 3.1 sp|Q8ND99|YS038_HUMAN Uncharacterized protein DKFZp434G1729 OS=H... 31 4.0 sp|Q9JLU4|SHAN3_RAT SH3 and multiple ankyrin repeat domains prot... 31 4.0 sp|Q4ACU6|SHAN3_MOUSE SH3 and multiple ankyrin repeat domains pr... 31 4.0 sp|A5GVG4|IF2_SYNR3 Translation initiation factor IF-2 OS=Synech... 31 4.0 sp|Q8NDZ2|CE025_HUMAN Uncharacterized protein C5orf25 OS=Homo sa... 31 4.0 sp|P64920|Y2026_MYCBO Uncharacterized protein Mb2026c OS=Mycobac... 31 5.2 sp|P64919|Y2003_MYCTU Uncharacterized protein Rv2003c/MT2059 OS=... 31 5.2 sp|Q9BYB0|SHAN3_HUMAN SH3 and multiple ankyrin repeat domains pr... 31 5.2 sp|Q8N4B5|PRR18_HUMAN Proline-rich protein 18 OS=Homo sapiens GN... 31 5.2 sp|O58558|Y828_PYRHO UPF0131 protein PH0828 OS=Pyrococcus horiko... 30 6.8 sp|P13785|FLP_ZYGRO Recombinase Flp protein OS=Zygosaccharomyces... 30 6.8
>sp|Q9M8T3|U131_ARATH UPF0131 protein At3g02910 OS=Arabidopsis thaliana GN=At3g02910 PE=2 SV=1 Length = 182
Score = 117 bits (293), Expect = 4e-26 Identities = 56/98 (57%), Positives = 70/98 (71%) Frame = +1
Query: 244 PSSTRLAFVYGTLKRGFGNHWLMEELMAGSHAHFLGYALTKRRFPLVCGPFQVPFLLHSP 423 P++T L F YGTLKRGF NH LM++L+ A F G T ++PLVCGP++VPFLL+ P Sbjct: 3 PATTTLVFTYGTLKRGFSNHVLMQDLIRSGDASFKGVYQTLDKYPLVCGPYRVPFLLNKP 62
Query: 424 SPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPI 537 SG+HV GELY V +SRLDELEG+ +GHY R PI Sbjct: 63 G-SGYHVNGELYAVSPRGLSRLDELEGISRGHYIRQPI 99
>sp|Q9W0Y2|YS11_DROME UPF0131 protein CG2811 OS=Drosophila melanogaster GN=CG2811 PE=2 SV=2 Length = 157
Score = 71.2 bits (173), Expect = 3e-12 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 2/81 (2%) Frame = +1
Query: 265 FVYGTLKRGFGNH-WLMEELMAGSHAHFLGYALTKRRFPLVCGP-FQVPFLLHSPSPSGH 438 FVYGTLKRG NH WL ++ A FLG T+ +FPLV G + +PFLL P G+ Sbjct: 12 FVYGTLKRGEPNHHWLTKK--ENGQARFLGRGKTETKFPLVVGTRYNIPFLLARPG-EGN 68
Query: 439 HVRGELYQVDSLAISRLDELE 501 H+ GE+Y+VD +S+LD LE Sbjct: 69 HIEGEVYEVDETMLSKLDILE 89
>sp|Q4KM86|A2LD1_RAT AIG2-like domain-containing protein 1 OS=Rattus norvegicus GN=A2ld1 PE=2 SV=1 Length = 149
Score = 68.2 bits (165), Expect = 3e-11 Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Frame = +1
Query: 265 FVYGTLKRGFGNHWLMEELMAGSHAHFLGYALTKRRFPLV-CGPFQVPFLLHSPSPSGHH 441 FVYGTLKRG NH +M + G A F G T FPLV G +P+LLH P GH Sbjct: 5 FVYGTLKRGQPNHKVMLDQSHGL-ATFRGRGCTVESFPLVIAGEHNIPWLLHLPG-KGHC 62
Query: 442 VRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRII 552 V GE+Y+VD + LD+ EG Y+R + VR++ Sbjct: 63 VAGEIYEVDEQMLRFLDDFEGC-PSMYQRTALQVRVL 98
>sp|Q923B0|A2LD1_MOUSE AIG2-like domain-containing protein 1 OS=Mus musculus GN=a2ld1 PE=1 SV=1 Length = 149
Score = 61.6 bits (148), Expect = 3e-09 Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 1/104 (0%) Frame = +1
Query: 265 FVYGTLKRGFGNHWLMEELMAGSHAHFLGYALTKRRFPLV-CGPFQVPFLLHSPSPSGHH 441 FVYGTLKRG NH +M + G A F G T FPLV G +P+LL+ P GH Sbjct: 5 FVYGTLKRGQPNHKVMLDHSHGL-AAFRGRGCTVESFPLVIAGEHNIPWLLYLPG-KGHC 62
Query: 442 VRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDAD 573 V GE+Y+VD + LD+ E Y+R + V+++ D D Sbjct: 63 VTGEIYEVDEQMLRFLDDFEDC-PSMYQRTALQVQVLEWEGDGD 105
>sp|Q0VFX9|A2LD1_BOVIN AIG2-like domain-containing protein 1 OS=Bos taurus GN=A2LD1 PE=2 SV=1 Length = 168
Score = 60.8 bits (146), Expect = 5e-09 Identities = 51/129 (39%), Positives = 67/129 (51%), Gaps = 5/129 (3%) Frame = +1
Query: 178 KGPSTESSIPAPLRVSCDNGSAPSSTRLA--FVYGTLKRGFGNHWLMEELMAGSH--AHF 345 K +TE+ P G+ SS RLA FVYGTLK G NH + L+ G+H A F Sbjct: 7 KWSTTETGAPC--------GTDDSSGRLAPVFVYGTLKTGQPNHRV---LLDGAHGRAAF 55
Query: 346 LGYALTKRRFPLV-CGPFQVPFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHY 522 G A T +PLV G +P LL+ P GH V GE+Y+VD + LDE E Y Sbjct: 56 RGRAHTLEPYPLVIAGEHNIPRLLNLPG-RGHRVFGEVYEVDERMLRFLDEFESC-PDMY 113
Query: 523 ERCPIYVRI 549 +R ++V + Sbjct: 114 QRTRLHVAL 122
>sp|Q9BVM4|A2LD1_HUMAN AIG2-like domain-containing protein 1 OS=Homo sapiens GN=A2LD1 PE=2 SV=2 Length = 153
Score = 58.9 bits (141), Expect = 2e-08 Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 1/99 (1%) Frame = +1
Query: 259 LAFVYGTLKRGFGNHWLMEELMAGSHAHFLGYALTKRRFPLV-CGPFQVPFLLHSPSPSG 435 L FVYGTLKRG NH ++ + GS A F T +PLV G +P+LLH P SG Sbjct: 3 LVFVYGTLKRGQPNHRVLRDGAHGS-AAFRARGRTLEPYPLVIAGEHNIPWLLHLPG-SG 60
Query: 436 HHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRII 552 V GE+Y VD + LD+ E Y+R + V+++ Sbjct: 61 RLVEGEVYAVDERMLRFLDDFESC-PALYQRTVLRVQLL 98
>sp|A3KNL6|A2LDB_DANRE AIG2-like domain-containing protein 1-B OS=Danio rerio GN=zgc:162208 PE=2 SV=1 Length = 152
Score = 55.5 bits (132), Expect = 2e-07 Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 3/98 (3%) Frame = +1
Query: 250 STRLAFVYGTLKRGFGNHWLMEELMAGSH--AHFLGYALTKRRFPLVCG-PFQVPFLLHS 420 ST FVYG+LK+G NH EL+ ++ A F+ A TK +PLV +PFLL+ Sbjct: 2 STHHVFVYGSLKKGQPNH---HELLNSNNGQAEFITCAQTKEPYPLVIATKHNIPFLLNV 58
Query: 421 PSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCP 534 P SG V GE+Y VD + LD +E+CP Sbjct: 59 PG-SGKQVSGEIYSVDQKMLEFLD--------WFEKCP 87
>sp|Q66I06|A2LDA_DANRE AIG2-like domain-containing protein 1-A OS=Danio rerio GN=zgc:92115 PE=2 SV=1 Length = 191
Score = 54.3 bits (129), Expect = 4e-07 Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Frame = +1
Query: 259 LAFVYGTLKRGFGNHWLMEELMAGSHAHFLGYALTKRRFPLV-CGPFQVPFLLHSPSPSG 435 L FVYGTLK+G N++ + + G A F+ A T +PLV G +PFLL+ P SG Sbjct: 3 LVFVYGTLKKGQPNYFRLIDSSNG-QAEFITCARTVEPYPLVITGECNIPFLLNVPG-SG 60
Query: 436 HHVRGELYQVDSLAISRLDELEGVGKGHYERCP 534 V GE+Y VD + LD +E CP Sbjct: 61 QRVYGEIYSVDQKMLEFLD--------WFEECP 85
>sp|A0JMM9|A2LDC_DANRE AIG2-like domain-containing protein 1-C OS=Danio rerio GN=zgc:154024 PE=2 SV=1 Length = 161
Score = 53.5 bits (127), Expect = 8e-07 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Frame = +1
Query: 265 FVYGTLKRGFGNHWLMEELMAGSHAHFLGYALTKRRFPLVCGPF-QVPFLLHSPSPSGHH 441 FVYGTLK+G N+ + G A F+ A TK +P+V + PFLL+ P SG Sbjct: 24 FVYGTLKKGQSNYHELTNTTHGQ-AEFITCARTKDPYPMVIATKDKFPFLLNVPG-SGQQ 81
Query: 442 VRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRII 552 V GE+Y VD + LDE E Y+R I ++I+ Sbjct: 82 VYGEIYNVDQNMLDFLDEFEEC-PDLYQRTSIQLKIL 117
>sp|Q9W0Y1|TINA1_DROME Troponin C-akin-1 protein OS=Drosophila melanogaster GN=Tina-1 PE=2 SV=1 Length = 167
Score = 50.1 bits (118), Expect = 8e-06 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 26/132 (19%) Frame = +1
Query: 265 FVYGTLKRGFGNHWLMEELMAGSHAHFLGYALTKRRFPLVCGP-FQVPFLLHSPSPSGHH 441 FVYG LK G ++ ++ G A F A T ++ PLV + +PFLL+ P G++ Sbjct: 15 FVYGALKYGQPSNSILASSGNG-FAKFWCKATTTQKLPLVIATRYNIPFLLNKPGV-GYY 72
Query: 442 VRGELYQVDSLAISRLDELE---------------GVGKG----------HYERCPIYVR 546 V GE+Y+VD ++ LD LE GVG+G Y + +R Sbjct: 73 VTGEIYEVDDRMLNSLDNLEDCEEIYTREMHDMNIGVGEGTVPCWVYLLQKYPENLLSLR 132
Query: 547 IISPLLDADTHP 582 +S ++ THP Sbjct: 133 YLSSYENSTTHP 144
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TZP6 |
Definition |
tr|A9TZP6|A9TZP6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
92 |
Score (bit) |
135.0 |
E-value |
2.0e-30 |
Report |
|