DK953531 |
Clone id |
TST39A01NGRL0018_A08 |
Library |
TST39 |
Length |
614 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_A08. 5' end sequence. |
Accession |
DK953531 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL980Contig1 |
Sequence |
GGAAGCGAGAGGAAAGGTTAAAGGTATTGGACAACTCAGCAAAGCAGGTTGAAAATGAAC AAGGCTTTTGTGCATCTCCCTTTCGAGGCTCAAAATGTTATGCTCGCAGCTCCGGGGAAC GTAGCCATCGCAAGAGCAGTGGCGCCATTCTGGCTCTCGTCTTCTATATATGGTCTTTGA TCAAAGCTAACATCGCATGCTTACAGAATTCACAGAAAGACTGTTTCTTATTTTGGTGCC AAATAGGGCATGAGGTTCATTGGAATGATTAAGAGATGGAGAAGAGTGCATTGGACTGTC CCTACCCGGGATGCTTCTTTTGTGTCATGAAAGAGGCAAACCCCACGAAGCGCCGTGCCA GTGTATCGAAATTTTTTAAGGAGTTTCCCAGCCAAGATGAGGAAGGGCAGGTCCTTGCTG TCAGCGGGCTTTGGAATACCGCAATGGCGCACCCCAATGATCCTGAGTTCATTGAGCTGG GAGTATTTGAGTGCATGGAAGCCCTTATTTGGAAAGGGATCAAGAACAGGCAATGGCTAG CAAAGGATCAGAACATCTACATTCCTTATTATGCTGCCCATATTATTGGCTCTTACACTA TGAATATTGAGGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P55518 |
Definition |
sp|P55518|Y4JR_RHISN Uncharacterized protein y4jR OS=Rhizobium sp. (strain NGR234) |
Align length |
49 |
Score (bit) |
33.9 |
E-value |
0.68 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6L4Y6 |
Definition |
tr|Q6L4Y6|Q6L4Y6_ORYSJ Os05g0421300 protein OS=Oryza sativa subsp. japonica |
Align length |
113 |
Score (bit) |
212.0 |
E-value |
1.0e-53 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953531|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_A08, 5' (614 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6L4Y6|Q6L4Y6_ORYSJ Os05g0421300 protein OS=Oryza sativa subs... 212 1e-53 tr|B8AYC8|B8AYC8_ORYSI Putative uncharacterized protein OS=Oryza... 212 1e-53 tr|A3B457|A3B457_ORYSJ Putative uncharacterized protein OS=Oryza... 212 1e-53 tr|A7R002|A7R002_VITVI Chromosome chr7 scaffold_294, whole genom... 211 3e-53 tr|A5C8E6|A5C8E6_VITVI Putative uncharacterized protein OS=Vitis... 211 3e-53 tr|A9SVL4|A9SVL4_PHYPA Predicted protein OS=Physcomitrella paten... 208 2e-52 tr|Q9LX10|Q9LX10_ARATH Putative uncharacterized protein T31P16_1... 204 4e-51 tr|Q0WMT6|Q0WMT6_ARATH Putative uncharacterized protein At5g1020... 204 4e-51 tr|B7U9S2|B7U9S2_CARAS AT5G10200-like protein OS=Cardaminopsis a... 204 4e-51 tr|Q4ABQ0|Q4ABQ0_BRARP 80A08_17 OS=Brassica rapa subsp. pekinens... 203 6e-51 tr|A9THA5|A9THA5_PHYPA Predicted protein OS=Physcomitrella paten... 183 8e-45 tr|A7PLL7|A7PLL7_VITVI Chromosome chr7 scaffold_20, whole genome... 145 1e-33 tr|Q9SN15|Q9SN15_ARATH Putative uncharacterized protein F3A4.110... 143 7e-33 tr|A7NU61|A7NU61_VITVI Chromosome chr18 scaffold_1, whole genome... 130 8e-29 tr|A5B9D4|A5B9D4_VITVI Putative uncharacterized protein OS=Vitis... 130 8e-29 tr|Q9FMH1|Q9FMH1_ARATH Similarity to unknown protein OS=Arabidop... 98 3e-19 tr|Q8H061|Q8H061_ORYSJ Putative uncharacterized protein OSJNBa00... 91 5e-17 tr|B8AQG6|B8AQG6_ORYSI Putative uncharacterized protein OS=Oryza... 91 5e-17 tr|A3AFB3|A3AFB3_ORYSJ Putative uncharacterized protein OS=Oryza... 91 5e-17 tr|B4UJD9|B4UJD9_ANASK Cytochrome C family protein OS=Anaeromyxo... 35 3.5 tr|B8JFF6|B8JFF6_9DELT Cytochrome C family protein OS=Anaeromyxo... 35 3.5 tr|Q2ILQ9|Q2ILQ9_ANADE Cytochrome c like protein OS=Anaeromyxoba... 35 4.5 tr|A9EP75|A9EP75_SORC5 Putative uncharacterized protein OS=Soran... 34 7.7 tr|B4P546|B4P546_DROYA GE13968 OS=Drosophila yakuba GN=GE13968 P... 34 7.7 tr|B3NMM6|B3NMM6_DROER GG21025 OS=Drosophila erecta GN=GG21025 P... 34 7.7
>tr|Q6L4Y6|Q6L4Y6_ORYSJ Os05g0421300 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0092E21.8 PE=2 SV=1 Length = 601
Score = 212 bits (540), Expect = 1e-53 Identities = 94/113 (83%), Positives = 104/113 (92%) Frame = +3
Query: 276 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 455 MEK DCPYPGCFFCVMKEANP+KRRASV KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MEKIQSDCPYPGCFFCVMKEANPSKRRASVLKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 456 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEE 614 NDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EE Sbjct: 61 NDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEE 113
>tr|B8AYC8|B8AYC8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20013 PE=4 SV=1 Length = 601
Score = 212 bits (540), Expect = 1e-53 Identities = 94/113 (83%), Positives = 104/113 (92%) Frame = +3
Query: 276 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 455 MEK DCPYPGCFFCVMKEANP+KRRASV KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MEKIQSDCPYPGCFFCVMKEANPSKRRASVLKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 456 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEE 614 NDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EE Sbjct: 61 NDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEE 113
>tr|A3B457|A3B457_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017829 PE=4 SV=1 Length = 540
Score = 212 bits (540), Expect = 1e-53 Identities = 94/113 (83%), Positives = 104/113 (92%) Frame = +3
Query: 276 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 455 MEK DCPYPGCFFCVMKEANP+KRRASV KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MEKIQSDCPYPGCFFCVMKEANPSKRRASVLKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 456 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEE 614 NDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EE Sbjct: 61 NDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEE 113
>tr|A7R002|A7R002_VITVI Chromosome chr7 scaffold_294, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010915001 PE=4 SV=1 Length = 627
Score = 211 bits (537), Expect = 3e-53 Identities = 92/113 (81%), Positives = 105/113 (92%) Frame = +3
Query: 276 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 455 M+K + DCPYPGCFFCVMKE NP+KRRAS+ KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MDKVSPDCPYPGCFFCVMKEGNPSKRRASILKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 456 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEE 614 NDPEFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EE Sbjct: 61 NDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEE 113
>tr|A5C8E6|A5C8E6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023407 PE=4 SV=1 Length = 635
Score = 211 bits (537), Expect = 3e-53 Identities = 92/113 (81%), Positives = 105/113 (92%) Frame = +3
Query: 276 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 455 M+K + DCPYPGCFFCVMKE NP+KRRAS+ KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MDKVSPDCPYPGCFFCVMKEGNPSKRRASILKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 456 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEE 614 NDPEFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EE Sbjct: 61 NDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEE 113
>tr|A9SVL4|A9SVL4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_188847 PE=4 SV=1 Length = 643
Score = 208 bits (530), Expect = 2e-52 Identities = 92/113 (81%), Positives = 105/113 (92%) Frame = +3
Query: 276 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 455 MEK + DCPYPGCFFCVMKE N +KRR++V+KFFKE PSQ+E+GQVLA+SGLWNTAMAHP Sbjct: 1 MEKHSSDCPYPGCFFCVMKETNLSKRRSNVAKFFKELPSQNEDGQVLAISGLWNTAMAHP 60
Query: 456 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEE 614 NDPEFIELG+FECM LIWKGI++R WLA+DQNIYIPYYAAHIIGSYTMN+EE Sbjct: 61 NDPEFIELGIFECMARLIWKGIEDRNWLAQDQNIYIPYYAAHIIGSYTMNVEE 113
>tr|Q9LX10|Q9LX10_ARATH Putative uncharacterized protein T31P16_190 OS=Arabidopsis thaliana GN=T31P16_190 PE=4 SV=1 Length = 621
Score = 204 bits (518), Expect = 4e-51 Identities = 87/110 (79%), Positives = 102/110 (92%) Frame = +3
Query: 285 SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHPNDP 464 S+ +CPYPGCFFCVMKE NP+KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAHPNDP Sbjct: 5 SSQECPYPGCFFCVMKEGNPSKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAHPNDP 64
Query: 465 EFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEE 614 EFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EE Sbjct: 65 EFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEE 114
>tr|Q0WMT6|Q0WMT6_ARATH Putative uncharacterized protein At5g10200 OS=Arabidopsis thaliana GN=At5g10200 PE=2 SV=1 Length = 631
Score = 204 bits (518), Expect = 4e-51 Identities = 87/110 (79%), Positives = 102/110 (92%) Frame = +3
Query: 285 SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHPNDP 464 S+ +CPYPGCFFCVMKE NP+KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAHPNDP Sbjct: 5 SSQECPYPGCFFCVMKEGNPSKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAHPNDP 64
Query: 465 EFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEE 614 EFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EE Sbjct: 65 EFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEE 114
>tr|B7U9S2|B7U9S2_CARAS AT5G10200-like protein OS=Cardaminopsis arenosa PE=4 SV=1 Length = 630
Score = 204 bits (518), Expect = 4e-51 Identities = 87/110 (79%), Positives = 102/110 (92%) Frame = +3
Query: 285 SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHPNDP 464 S+ +CPYPGCFFCVMKE NP+KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAHPNDP Sbjct: 5 SSQECPYPGCFFCVMKEGNPSKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAHPNDP 64
Query: 465 EFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEE 614 EFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EE Sbjct: 65 EFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEE 114
>tr|Q4ABQ0|Q4ABQ0_BRARP 80A08_17 OS=Brassica rapa subsp. pekinensis GN=80A08_17 PE=4 SV=1 Length = 631
Score = 203 bits (517), Expect = 6e-51 Identities = 89/114 (78%), Positives = 104/114 (91%), Gaps = 1/114 (0%) Frame = +3
Query: 276 MEK-SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAH 452 MEK S+ +CPYPGCFFCVMKE NP KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAH Sbjct: 1 MEKASSQECPYPGCFFCVMKEGNPNKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAH 60
Query: 453 PNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEE 614 PNDPEFI+LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EE Sbjct: 61 PNDPEFIDLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEE 114
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