DK953533 |
Clone id |
TST39A01NGRL0018_A10 |
Library |
TST39 |
Length |
616 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_A10. 5' end sequence. |
Accession |
DK953533 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL29Contig1 |
Sequence |
GTCAAGCGGAGTAGAAGAGTTGCGTAGGAGCTCGGCCGCAGGATGGGTATCTCACGGGAC TCCACGCACAAGAGGCGGGCAACTGGAGGCAAGAAGAAGACATGGCGCAAGAAAAGGAAA TACGAGTTGGGTCGTCAACCAGGCATGACTAAGCTGTCCAGTAACAAGACTGTAAGGAAG ATCCGCGTGCGGGGAGGCAATTTCAAGTTTCGTGCTCTGCGCCTTGATACTGGCAACTAC TCATGGGGATCAGAGGCAACGACCAGGAAGACCCGTATCTTAGATGTTGTCTACAATGCA TCCAATAATGAGCTTGTTAGGACGCAGACGCTCGTGAAGTCTGCCATTGTTCAGGTGGAT GCTGCACCTTTCCGCCAGTGGTATAGCCAGCACTATGGTGTGGACTTGGGAAAGAAGAAG AGAGCTGCCAGTGCCAAGAAGGAAGCTGAGGACACGGATGCTACCGCAGGTGACGGGGAG AAGAAGCAAAGCAAACATGTCGAGCGGAAGATATCTGCTCGTAATGAGGATCGCAAATTT GGATGCTCATCTGGAGGATCAAATTGCAAGTGGACGCCTTCTTCGCTTGCATATCATCTC GTCCTGGCCCATGTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q93VG5 |
Definition |
sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis thaliana |
Align length |
167 |
Score (bit) |
197.0 |
E-value |
1.0e-53 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953533|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_A10, 5' (616 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis t... 197 1e-53 sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8... 197 1e-52 sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa sub... 202 2e-52 sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca... 192 1e-50 sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis t... 189 3e-50 sp|Q90YR6|RS8_ICTPU 40S ribosomal protein S8 OS=Ictalurus puncta... 153 5e-38 sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera G... 150 6e-37 sp|Q9ZT56|RS8_GRIJA 40S ribosomal protein S8 OS=Griffithsia japo... 153 6e-37 sp|Q9P7B2|RS8B_SCHPO 40S ribosomal protein S8-B OS=Schizosacchar... 151 2e-36 sp|O14049|RS8A_SCHPO 40S ribosomal protein S8-A OS=Schizosacchar... 151 3e-36 sp|Q4N3P0|RS8_THEPA 40S ribosomal protein S8 OS=Theileria parva ... 149 1e-35 sp|P62247|RS8_DANRE 40S ribosomal protein S8 OS=Danio rerio GN=r... 145 1e-35 sp|Q8MLY8|RS8_DROME 40S ribosomal protein S8 OS=Drosophila melan... 145 2e-35 sp|P62243|RS8_RAT 40S ribosomal protein S8 OS=Rattus norvegicus ... 145 3e-35 sp|P62242|RS8_MOUSE 40S ribosomal protein S8 OS=Mus musculus GN=... 145 3e-35 sp|Q4R6P8|RS8_MACFA 40S ribosomal protein S8 OS=Macaca fascicula... 145 3e-35 sp|P62241|RS8_HUMAN 40S ribosomal protein S8 OS=Homo sapiens GN=... 145 3e-35 sp|Q5E958|RS8_BOVIN 40S ribosomal protein S8 OS=Bos taurus GN=RP... 145 3e-35 sp|Q4UFS9|RS8_THEAN 40S ribosomal protein S8 OS=Theileria annula... 147 6e-35 sp|Q8WQI5|RS8_SPOFR 40S ribosomal protein S8 OS=Spodoptera frugi... 145 7e-35 sp|Q54E24|RS8_DICDI 40S ribosomal protein S8 OS=Dictyostelium di... 143 8e-34 sp|P48156|RS8_CAEEL 40S ribosomal protein S8 OS=Caenorhabditis e... 142 1e-33 sp|Q7SYU0|RS8_XENLA 40S ribosomal protein S8 OS=Xenopus laevis G... 139 2e-33 sp|P05754|RS8_YEAST 40S ribosomal protein S8 OS=Saccharomyces ce... 139 4e-33 sp|P25204|RS8_LEIMA 40S ribosomal protein S8 OS=Leishmania major... 134 5e-31 sp|A3DNX9|RS8E_STAMF 30S ribosomal protein S8e OS=Staphylothermu... 59 3e-08 sp|P61301|RS8E_NANEQ 30S ribosomal protein S8e OS=Nanoarchaeum e... 55 4e-07 sp|Q6L0D3|RS8E_PICTO 30S ribosomal protein S8e OS=Picrophilus to... 54 5e-07 sp|A0B8P7|RS8E_METTP 30S ribosomal protein S8e OS=Methanosaeta t... 54 8e-07 sp|A2STM4|RS8E_METLZ 30S ribosomal protein S8e OS=Methanocorpusc... 53 1e-06
>sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1 Length = 222
Score = 197 bits (500), Expect(3) = 1e-53 Identities = 105/167 (62%), Positives = 117/167 (70%), Gaps = 3/167 (1%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YE+GRQP TKLSSNKTVR+IRVRGGN K+RALR Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGNYSWGSEATTRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPF+QWY HYGV Sbjct: 61 LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120
Query: 403 DLGXXXXXXXXXXXXXDTD---ATAGDGEKKQSKHVERKISARNEDR 534 +LG + A A E K+S H+ RKI++R E R Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGR 167
Score = 30.0 bits (66), Expect(3) = 1e-53 Identities = 16/25 (64%), Positives = 19/25 (76%) Frame = +2
Query: 536 NLDAHLEDQIASGRLLRLHIISSWP 610 +LD+H+EDQ ASGRLL ISS P Sbjct: 168 SLDSHIEDQFASGRLLA--CISSRP 190
Score = 24.3 bits (51), Expect(3) = 1e-53 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +3
Query: 585 ACISSRPGPC 614 ACISSRPG C Sbjct: 184 ACISSRPGQC 193
>sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2 Length = 221
Score = 197 bits (502), Expect(3) = 1e-52 Identities = 105/165 (63%), Positives = 114/165 (69%), Gaps = 1/165 (0%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YELGRQP TKLSSNKTVR++RVRGGN K+RALR Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY HYGV Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 403 DLGXXXXXXXXXXXXXD-TDATAGDGEKKQSKHVERKISARNEDR 534 D+G + + A E K+S HV RK+ R E R Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGR 165
Score = 25.8 bits (55), Expect(3) = 1e-52 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +2
Query: 539 LDAHLEDQIASGRLLRLHIISSWP 610 LD H+E+Q SGRLL ISS P Sbjct: 167 LDPHIEEQFGSGRLLA--CISSRP 188
Score = 24.3 bits (51), Expect(3) = 1e-52 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +3
Query: 585 ACISSRPGPC 614 ACISSRPG C Sbjct: 182 ACISSRPGQC 191
>sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2 Length = 220
Score = 202 bits (514), Expect(2) = 2e-52 Identities = 106/164 (64%), Positives = 114/164 (69%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YELGRQP TKLSSNKTVR++RVRGGN K+RALR Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY HYGV Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDR 534 D+G DA A E K+S HV RK+ R + R Sbjct: 121 DIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGR 164
Score = 24.3 bits (51), Expect(2) = 2e-52 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +3
Query: 585 ACISSRPGPC 614 ACISSRPG C Sbjct: 181 ACISSRPGQC 190
>sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1 Length = 221
Score = 192 bits (488), Expect(3) = 1e-50 Identities = 102/164 (62%), Positives = 114/164 (69%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YELGRQP TKLSSNKTVR+IRVRGGN K+RALR Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY QHYGV Sbjct: 61 LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDR 534 ++G + + A E K+S HV K+ R + R Sbjct: 121 EIGRKKKTAAAKKDTPE-EGEATTEEAKKSNHVAIKLEKRQQGR 163
Score = 25.0 bits (53), Expect(3) = 1e-50 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +2
Query: 539 LDAHLEDQIASGRLLRLHIISSWP 610 LDAH+E+Q G+LL ISS P Sbjct: 165 LDAHIEEQFGGGKLLA--CISSRP 186
Score = 24.3 bits (51), Expect(3) = 1e-50 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +3
Query: 585 ACISSRPGPC 614 ACISSRPG C Sbjct: 180 ACISSRPGQC 189
>sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1 Length = 210
Score = 189 bits (481), Expect(3) = 3e-50 Identities = 104/164 (63%), Positives = 114/164 (69%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YELGRQP TKLSSNKTVR+IRVRGGN K+RALR Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGN+SWGSEA TRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPF+Q Y QHYGV Sbjct: 61 LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDR 534 D+G +A + E K+S HV+RK+ R E R Sbjct: 121 DIGRKKKG----------EAVTTE-EVKKSNHVQRKLEMRQEGR 153
Score = 27.3 bits (59), Expect(3) = 3e-50 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = +2
Query: 539 LDAHLEDQIASGRLL 583 LD+HLE+Q +SGRLL Sbjct: 155 LDSHLEEQFSSGRLL 169
Score = 23.1 bits (48), Expect(3) = 3e-50 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +3
Query: 585 ACISSRPGPC 614 ACI+SRPG C Sbjct: 170 ACIASRPGQC 179
>sp|Q90YR6|RS8_ICTPU 40S ribosomal protein S8 OS=Ictalurus punctatus GN=rps8 PE=2 SV=3 Length = 208
Score = 153 bits (386), Expect(2) = 5e-38 Identities = 83/165 (50%), Positives = 100/165 (60%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRD+ H YELGR P TKL K + +RVRGGN K+RALR Sbjct: 1 MGISRDNWHKRRKTGGKRKPVHKKRKYELGRPPSNTKLGP-KRIHTVRVRGGNKKYRALR 59
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ ++ VD+APFRQWY HY + Sbjct: 60 LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYAL 119
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 LG T KK+SK V++K R ++ K Sbjct: 120 PLGRKKGAKL-------TPEEEDILNKKRSKKVQKKFDKRRKNSK 157
Score = 25.0 bits (53), Expect(2) = 5e-38 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +3
Query: 561 KLQVDAFFACISSRPGPC 614 + Q ACISSRPG C Sbjct: 165 QFQQGKLLACISSRPGQC 182
>sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera GN=RpS8 PE=2 SV=2 Length = 208
Score = 150 bits (379), Expect(2) = 6e-37 Identities = 85/165 (51%), Positives = 98/165 (59%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRD H +ELGR TKL + + +R RGGN K+RALR Sbjct: 1 MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQR-IHTVRTRGGNKKYRALR 59
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGN+SWGSE TTRKTRI+DVVYNASNNELVRT+TLVK+AIV +DA PFRQWY HY + Sbjct: 60 LDTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVL 119
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 LG T+A KK+SK E K AR K Sbjct: 120 PLGRKRGAKL-------TEAEEEVLNKKRSKKAEAKYKARQRFAK 157
Score = 24.3 bits (51), Expect(2) = 6e-37 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +3
Query: 585 ACISSRPGPC 614 ACISSRPG C Sbjct: 173 ACISSRPGQC 182
>sp|Q9ZT56|RS8_GRIJA 40S ribosomal protein S8 OS=Griffithsia japonica GN=RPS8 PE=2 SV=1 Length = 204
Score = 153 bits (387), Expect = 6e-37 Identities = 85/164 (51%), Positives = 99/164 (60%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YELGRQP MTK+ K VR +RVRGGN K RALR Sbjct: 1 MGISRDSRHKRRLTGGKHPYTCKKRKYELGRQPAMTKIGG-KLVRTVRVRGGNLKSRALR 59
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 L++GN++WGSEA T K+RIL+VVYNASNNELVRT T VK I+Q+DA PFRQ+Y HYG+ Sbjct: 60 LESGNFAWGSEAFTSKSRILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGI 119
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDR 534 D+G AGD E K SK K R + R Sbjct: 120 DIG---------------KKKAGDEESKFSKRHAGKQEKRCQTR 148
>sp|Q9P7B2|RS8B_SCHPO 40S ribosomal protein S8-B OS=Schizosaccharomyces pombe GN=rps8b PE=1 SV=1 Length = 200
Score = 151 bits (382), Expect = 2e-36 Identities = 85/165 (51%), Positives = 102/165 (61%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGI+RDS H +ELGRQP T++ K + ++RVRGGN KFRALR Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALR 59
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LD+GN+SWGSE ++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPFR WY HYG+ Sbjct: 60 LDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGI 119
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 +G ATA K SKHV+RK SAR D K Sbjct: 120 LMG-----------SKGKKATATPTPK--SKHVQRKHSARLGDSK 151
>sp|O14049|RS8A_SCHPO 40S ribosomal protein S8-A OS=Schizosaccharomyces pombe GN=rps8a PE=2 SV=1 Length = 200
Score = 151 bits (381), Expect = 3e-36 Identities = 82/165 (49%), Positives = 100/165 (60%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGI+RDS H +ELGRQP T++ K + ++RVRGGN KFRALR Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALR 59
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LD+GN+SWGSE ++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPFR WY HYG+ Sbjct: 60 LDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGI 119
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 +G A +SKHV+RK SAR D K Sbjct: 120 LMG-------------SKGKKATSTPNPKSKHVQRKHSARLGDSK 151
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TGU7 |
Definition |
tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens |
Align length |
165 |
Score (bit) |
206.0 |
E-value |
3.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953533|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_A10, 5' (616 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella pa... 206 3e-55 tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella pa... 204 4e-55 tr|A9NMS2|A9NMS2_PICSI Ribosomal protein S8 OS=Picea sitchensis ... 208 2e-54 tr|A9NMR0|A9NMR0_PICSI Ribosomal protein S8 OS=Picea sitchensis ... 208 4e-54 tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella pa... 203 5e-54 tr|B8LML6|B8LML6_PICSI Putative uncharacterized protein OS=Picea... 206 6e-54 tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella pa... 202 8e-54 tr|A9NNT7|A9NNT7_PICSI Ribosomal protein S8 OS=Picea sitchensis ... 205 1e-53 tr|A9P8D2|A9P8D2_POPTR Ribosomal protein S8 OS=Populus trichocar... 207 1e-53 tr|A9P8H4|A9P8H4_POPTR Ribosomal protein S8 OS=Populus trichocar... 207 4e-53 tr|Q3HRZ6|Q3HRZ6_SOLTU Ribosomal protein S8 OS=Solanum tuberosum... 201 2e-52 tr|B3TM36|B3TM36_ELAGV 40S ribosomal protein S8 OS=Elaeis guinee... 199 6e-52 tr|B4FGG1|B4FGG1_MAIZE Putative uncharacterized protein OS=Zea m... 200 7e-52 tr|A2XS59|A2XS59_ORYSI Ribosomal protein S8 OS=Oryza sativa subs... 197 7e-52 tr|B7FMW0|B7FMW0_MEDTR Putative uncharacterized protein OS=Medic... 199 7e-52 tr|B4FE90|B4FE90_MAIZE 40S ribosomal protein S8 OS=Zea mays PE=2... 197 2e-51 tr|Q7XKS7|Q7XKS7_ORYSA Ribosomal protein S8 OS=Oryza sativa GN=O... 197 2e-51 tr|Q0JDZ7|Q0JDZ7_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs... 197 2e-51 tr|Q0E158|Q0E158_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs... 202 2e-51 tr|B8AHZ6|B8AHZ6_ORYSI Putative uncharacterized protein OS=Oryza... 202 2e-51 tr|A5AUZ0|A5AUZ0_VITVI Ribosomal protein S8 OS=Vitis vinifera GN... 200 3e-51 tr|A9S3Y5|A9S3Y5_PHYPA Ribosomal protein S8 OS=Physcomitrella pa... 202 4e-51 tr|A1YKE4|A1YKE4_BRASY Ribosomal protein S8 OS=Brachypodium sylv... 193 2e-50 tr|A3A6Z9|A3A6Z9_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs... 191 3e-50 tr|B7FGL5|B7FGL5_MEDTR Putative uncharacterized protein OS=Medic... 192 8e-50 tr|Q2XPV9|Q2XPV9_SOLTU Ribosomal protein S8 OS=Solanum tuberosum... 193 3e-49 tr|Q0WSK1|Q0WSK1_ARATH Ribosomal protein S8 OS=Arabidopsis thali... 189 3e-49 tr|A7P0G2|A7P0G2_VITVI Ribosomal protein S8 OS=Vitis vinifera GN... 189 4e-48 tr|B6DMH1|B6DMH1_9LAMI Putative 40S ribosomal protein S8-like pr... 187 4e-47 tr|Q1WLZ1|Q1WLZ1_CHLIN Ribosomal protein S8 OS=Chlamydomonas inc... 178 4e-45
>tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_194964 PE=3 SV=1 Length = 216
Score = 206 bits (524), Expect(3) = 3e-55 Identities = 108/165 (65%), Positives = 120/165 (72%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDSTH YELGRQ MTKLSSNKTVR+IRVRGGNFKFRALR Sbjct: 1 MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNFKFRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV Sbjct: 61 LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 ++G D + E+K+SKHV RKI+ R E +K Sbjct: 121 EIG----KKKKTAAKKDAEEAEATEEEKKSKHVLRKIAKRVESQK 161
Score = 31.2 bits (69), Expect(3) = 3e-55 Identities = 14/15 (93%), Positives = 14/15 (93%) Frame = +2
Query: 539 LDAHLEDQIASGRLL 583 LDAHLEDQ ASGRLL Sbjct: 162 LDAHLEDQFASGRLL 176
Score = 23.1 bits (48), Expect(3) = 3e-55 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +3
Query: 585 ACISSRPGPC 614 ACI+SRPG C Sbjct: 177 ACIASRPGQC 186
>tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191463 PE=3 SV=1 Length = 216
Score = 204 bits (519), Expect(3) = 4e-55 Identities = 109/165 (66%), Positives = 119/165 (72%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDSTH YELGRQ MTKLSSNKTVR+IRVRGGN KFRALR Sbjct: 1 MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGN+SWGSEA TRKTRILDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV Sbjct: 61 LDTGNFSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 ++G +T + EKKQS HV RKI+ R E +K Sbjct: 121 EIGKKKKAAVKKEEVAETT----EEEKKQSSHVLRKIAKRAEGQK 161
Score = 31.6 bits (70), Expect(3) = 4e-55 Identities = 18/24 (75%), Positives = 18/24 (75%) Frame = +2
Query: 539 LDAHLEDQIASGRLLRLHIISSWP 610 LDAHLEDQ ASGRLL ISS P Sbjct: 162 LDAHLEDQFASGRLLA--CISSRP 183
Score = 24.3 bits (51), Expect(3) = 4e-55 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +3
Query: 585 ACISSRPGPC 614 ACISSRPG C Sbjct: 177 ACISSRPGQC 186
>tr|A9NMS2|A9NMS2_PICSI Ribosomal protein S8 OS=Picea sitchensis PE=2 SV=1 Length = 221
Score = 208 bits (530), Expect(2) = 2e-54 Identities = 106/165 (64%), Positives = 117/165 (70%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YELGRQP MTKLSSNKTVR++RVRGGN K+RALR Sbjct: 1 MGISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWY QHYG+ Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGL 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 D+G + + EKK+SKH+ +KI R E K Sbjct: 121 DIGRKKKAAAAKKETTEEGEATAEEEKKKSKHLLKKIEKRQEGHK 165
Score = 28.5 bits (62), Expect(2) = 2e-54 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = +2
Query: 539 LDAHLEDQIASGRLL 583 LD+HLE+Q ASGRLL Sbjct: 166 LDSHLEEQFASGRLL 180
>tr|A9NMR0|A9NMR0_PICSI Ribosomal protein S8 OS=Picea sitchensis PE=2 SV=1 Length = 221
Score = 208 bits (530), Expect(2) = 4e-54 Identities = 106/165 (64%), Positives = 117/165 (70%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YELGRQP MTKLSSNKTVR++RVRGGN K+RALR Sbjct: 1 MGISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWY QHYG+ Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGL 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 D+G + + EKK+SKH+ +KI R E K Sbjct: 121 DIGRKKKAAAAKKETTEEGEATAEEEKKKSKHLLKKIEKRQEGHK 165
Score = 26.9 bits (58), Expect(2) = 4e-54 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2
Query: 539 LDAHLEDQIASGRLL 583 LD+HLE+Q SGRLL Sbjct: 166 LDSHLEEQFGSGRLL 180
>tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110504 PE=3 SV=1 Length = 216
Score = 203 bits (516), Expect(3) = 5e-54 Identities = 108/165 (65%), Positives = 120/165 (72%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDSTH YELGRQ MTKLSSNKTVR+IRVRGGN KFRALR Sbjct: 1 MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV Sbjct: 61 LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 ++G D +A A + + KQS HV RKI+ R E +K Sbjct: 121 EIG----KKKKAAAKKDEEAEATEEQTKQSGHVLRKIAKRVEGQK 161
Score = 30.0 bits (66), Expect(3) = 5e-54 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = +2
Query: 539 LDAHLEDQIASGRLL 583 LD+HLEDQ ASGRLL Sbjct: 162 LDSHLEDQFASGRLL 176
Score = 23.1 bits (48), Expect(3) = 5e-54 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +3
Query: 585 ACISSRPGPC 614 ACI+SRPG C Sbjct: 177 ACIASRPGQC 186
>tr|B8LML6|B8LML6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 221
Score = 206 bits (525), Expect(2) = 6e-54 Identities = 105/165 (63%), Positives = 116/165 (70%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YELGRQP MTKLSSNKTVR++RVRGGN K+RALR Sbjct: 1 MGISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGNYSWGSE TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWY QHYG+ Sbjct: 61 LDTGNYSWGSEPVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGL 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 D+G + + EKK+SKH+ +KI R E K Sbjct: 121 DIGRKKKAAAAKKETTEEGEATAEEEKKKSKHLLKKIEKRQEGHK 165
Score = 28.5 bits (62), Expect(2) = 6e-54 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = +2
Query: 539 LDAHLEDQIASGRLL 583 LD+HLE+Q ASGRLL Sbjct: 166 LDSHLEEQFASGRLL 180
>tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_194737 PE=3 SV=1 Length = 216
Score = 202 bits (514), Expect(3) = 8e-54 Identities = 106/165 (64%), Positives = 120/165 (72%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDSTH YELGRQ MTKLSSNKTVR+IRVRGGN KFRALR Sbjct: 1 MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV Sbjct: 61 LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 ++G DT+ E+K+S HV+RK++ R E +K Sbjct: 121 EIG----KKKKAAAKKDTEDAETTEEEKKSAHVQRKLAKRLEGQK 161
Score = 30.0 bits (66), Expect(3) = 8e-54 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = +2
Query: 539 LDAHLEDQIASGRLL 583 LD+HLEDQ ASGRLL Sbjct: 162 LDSHLEDQFASGRLL 176
Score = 23.1 bits (48), Expect(3) = 8e-54 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +3
Query: 585 ACISSRPGPC 614 ACI+SRPG C Sbjct: 177 ACIASRPGQC 186
>tr|A9NNT7|A9NNT7_PICSI Ribosomal protein S8 OS=Picea sitchensis PE=2 SV=1 Length = 222
Score = 205 bits (522), Expect(2) = 1e-53 Identities = 107/166 (64%), Positives = 118/166 (71%), Gaps = 1/166 (0%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YELGRQP MTKLSSNKTVR++RVRGGN K+RALR Sbjct: 1 MGISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWY QHYG+ Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGL 120
Query: 403 DLGXXXXXXXXXXXXXDTDATA-GDGEKKQSKHVERKISARNEDRK 537 D+G + A + EKK+SKH+ +KI R E K Sbjct: 121 DIGRKKKAAAAAKKETTEEGEATAEEEKKKSKHLLKKIEKRQEGHK 166
Score = 28.5 bits (62), Expect(2) = 1e-53 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = +2
Query: 539 LDAHLEDQIASGRLL 583 LD+HLE+Q ASGRLL Sbjct: 167 LDSHLEEQFASGRLL 181
>tr|A9P8D2|A9P8D2_POPTR Ribosomal protein S8 OS=Populus trichocarpa PE=2 SV=1 Length = 219
Score = 207 bits (526), Expect(2) = 1e-53 Identities = 108/165 (65%), Positives = 116/165 (70%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YELGRQP TKLSSNKTVR+IRVRGGN K+RALR Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY QHYGV Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 D+G + A E KQS HV+RK+ R + RK Sbjct: 121 DIGRKKKTTAAAKKEGEEGEAAATEEVKQSNHVQRKLEKRQQIRK 165
Score = 26.9 bits (58), Expect(2) = 1e-53 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +2
Query: 527 RIANLDAHLEDQIASGRLL 583 +I LD H+E+Q SGRLL Sbjct: 162 QIRKLDPHIEEQFGSGRLL 180
>tr|A9P8H4|A9P8H4_POPTR Ribosomal protein S8 OS=Populus trichocarpa PE=2 SV=1 Length = 220
Score = 207 bits (526), Expect(2) = 4e-53 Identities = 109/165 (66%), Positives = 119/165 (72%) Frame = +1
Query: 43 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 222 MGISRDS H YELGRQP TKLSSNKTVR+IRVRGGN K+RALR Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 223 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 402 LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY QHYGV Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 403 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRK 537 D+G + D A E+K+SKHV+RK+ R + RK Sbjct: 121 DIGRKKKTAPAAKKEGE-DGEAAVEEEKKSKHVQRKLEKRQQTRK 164
Score = 25.4 bits (54), Expect(2) = 4e-53 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +2
Query: 539 LDAHLEDQIASGRLL 583 LD H+E+Q SGRLL Sbjct: 165 LDPHIEEQFGSGRLL 179
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