DK953537
Clone id TST39A01NGRL0018_A14
Library
Length 597
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_A14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CAAACTCAGAAAAACGCTCTTCTCCTGATCTCTCACAGCCTCATCCTCGAGGTGGGTGGG
ATAGGTTGAGATCGAGCTTTTTGAGCAGGGCACTAGGTTTGTAGAGAACGCGGCCTCAGA
GCGGCGCGGCACATATTCAATTGCAGAGGCAGAGGAATATGGTACGCTTTTCTCCAGAGA
TCACCACTGTCATTGTTGCCATGGCTTTGATAGTGATGATGATGGGAGCAATGGCCCAAT
CGCATGAGGAACACAACCACGGCCCTGCCGAAGCGCCACACATGGGTCATGACTCTGCGG
CGTCCACACCGATTTGCTTCTTCTCACAGCTAGCTGCCATAGCCTTCCCTGTCTGGCTCT
TGGCCTTCGTGTTCTAGACAGGTGGACCATTATTATCTTTGCAAATAACATGCTCCAAAA
CGAGATGCACATGGTTCTTCATTTTGAATAATAGTTAGCCATGATTACTAATCATGCCTT
AAAGTGAAGTATAAAGACACACATACTTTACTGCATTTTTCGATAGCTTATGGGGTACTT
TACTCATAATTACAATCTGCTTTCTTTATTTCTTTTTAATACTTTTCAGTTTTTATC
■■Homology search results ■■ -
sp_hit_id A8I4S6
Definition sp|A8I4S6|UREE_AZOC5 Urease accessory protein ureE OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
Align length 31
Score (bit) 29.6
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953537|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_A14, 5'
(597 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A8I4S6|UREE_AZOC5 Urease accessory protein ureE OS=Azorhizobi... 30 1.1
sp|P40924|PGK_BACSU Phosphoglycerate kinase OS=Bacillus subtilis... 32 2.4

>sp|A8I4S6|UREE_AZOC5 Urease accessory protein ureE OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=ureE PE=3 SV=1
Length = 208

Score = 29.6 bits (65), Expect(2) = 1.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2

Query: 125 RGTYSIAEAEEYGTLFSRDHHCHCCHGFDSD 217
RG Y AEA +G + DHH H H D
Sbjct: 139 RGAYEAAEAHGHGQAHAHDHHDHDHHDHGHD 169



Score = 22.3 bits (46), Expect(2) = 1.1
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +3

Query: 243 HEEHNHGPAEAPHMGHDSA 299
H +H H A H HD A
Sbjct: 163 HHDHGHDHAHHDHAHHDHA 181


>sp|P40924|PGK_BACSU Phosphoglycerate kinase OS=Bacillus subtilis
GN=pgk PE=1 SV=3
Length = 394

Score = 32.0 bits (71), Expect = 2.4
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Frame = +2

Query: 56 VG*VEIELFEQGTRFVENAASERRGTYSI-------AEAEEYGTLFSRDH 184
+G EI+LF QGT+ V A +E + TYS+ A E++G H
Sbjct: 319 MGVFEIDLFAQGTKAVAEALAEAKDTYSVIGGGDSAAAVEKFGLADKMSH 368


tr_hit_id Q6K6P6
Definition tr|Q6K6P6|Q6K6P6_ORYSJ Putative uncharacterized protein P0042D01.11 OS=Oryza sativa subsp. japonica
Align length 49
Score (bit) 33.9
E-value 7.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953537|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_A14, 5'
(597 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6K6P6|Q6K6P6_ORYSJ Putative uncharacterized protein P0042D01... 34 7.4

>tr|Q6K6P6|Q6K6P6_ORYSJ Putative uncharacterized protein P0042D01.11
OS=Oryza sativa subsp. japonica GN=P0042D01.11 PE=4 SV=1
Length = 213

Score = 33.9 bits (76), Expect = 7.4
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1

Query: 402 AKIIMVHLSRTRRPRARQGRLWQLAVRRSKSVWTPQSHDPCVALRQGRG 256
A+ LSRTR R R +L RR + W P PC+ +R RG
Sbjct: 104 AEAATTRLSRTRAASRRPRRCGRLRARRVAAAWGPAVSRPCLRVRLTRG 152