Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953560|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_B13, 5' (322 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 139 4e-33 sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 130 3e-30 sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 84 2e-16 sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragmen... 83 5e-16 sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chlorop... 83 5e-16 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 83 5e-16 sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A, chlorop... 83 5e-16 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 83 5e-16 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 83 5e-16 sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 83 5e-16 sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 83 5e-16 sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 83 5e-16 sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 83 5e-16 sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 83 5e-16 sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII ty... 83 5e-16 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 83 5e-16 sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 83 5e-16 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 82 8e-16 sp|P14277|CB2F_SOLLC Chlorophyll a-b binding protein 3B, chlorop... 82 8e-16 sp|P14276|CB2E_SOLLC Chlorophyll a-b binding protein 3A, chlorop... 82 8e-16 sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 82 8e-16 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 82 8e-16 sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 82 8e-16 sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 82 8e-16 sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 82 8e-16 sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 82 8e-16 sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 82 8e-16 sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 82 8e-16 sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 82 8e-16 sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch... 82 8e-16
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1 Length = 245
Score = 139 bits (350), Expect = 4e-33 Identities = 60/82 (73%), Positives = 73/82 (89%) Frame = +2
Query: 5 DPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLEN 184 DPE++KYPGG FDPLGFSKD KFEE K+KE+KNGRLA++AFVGF +Q +AYPGTGPLEN Sbjct: 161 DPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLEN 220
Query: 185 LATHLADPWSKNISEVLIPRSV 250 LATHLADPW NI +++IPR++ Sbjct: 221 LATHLADPWHNNIGDIVIPRNI 242
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1 Length = 246
Score = 130 bits (326), Expect = 3e-30 Identities = 58/82 (70%), Positives = 69/82 (84%) Frame = +2
Query: 5 DPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLEN 184 D E++KYPGG FDPLG+SKD KFEE KVKE+KNGRLAL+A VGF +Q +AY GTGPLEN Sbjct: 162 DSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLEN 221
Query: 185 LATHLADPWSKNISEVLIPRSV 250 LATHLADPW NI +V+IP+ + Sbjct: 222 LATHLADPWHNNIGDVIIPKGI 243
>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1 Length = 280
Score = 84.3 bits (207), Expect = 2e-16 Identities = 42/77 (54%), Positives = 55/77 (71%) Frame = +2
Query: 5 DPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLEN 184 D E + +PGGPFDPLG +KD ++ KVKE+KNGRLA+ A +GF IQA G GP+EN Sbjct: 195 DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYV-TGEGPVEN 253
Query: 185 LATHLADPWSKNISEVL 235 LA HL+DP+ N+ V+ Sbjct: 254 LAKHLSDPFGNNLLTVI 270
Score = 31.2 bits (69), Expect = 1.7 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +2
Query: 38 FDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAA 154 +DP G K + F +Y+ EL + R A++ GF I A Sbjct: 95 YDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEA 133
>sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1 Length = 116
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +2
Query: 23 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 202 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 40 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 98
Query: 203 DPWSKN 220 DP + N Sbjct: 99 DPVNNN 104
>sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1 Length = 265
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +2
Query: 23 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 202 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 247
Query: 203 DPWSKN 220 DP + N Sbjct: 248 DPVNNN 253
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1 Length = 265
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +2
Query: 23 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 202 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 247
Query: 203 DPWSKN 220 DP + N Sbjct: 248 DPVNNN 253
>sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1 Length = 265
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +2
Query: 23 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 202 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 247
Query: 203 DPWSKN 220 DP + N Sbjct: 248 DPVNNN 253
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1 Length = 266
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +2
Query: 23 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 202 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 190 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALV-TGKGPLENLADHLA 248
Query: 203 DPWSKN 220 DP + N Sbjct: 249 DPVNNN 254
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1 Length = 267
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +2
Query: 23 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 202 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 249
Query: 203 DPWSKN 220 DP + N Sbjct: 250 DPVNNN 255
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1 Length = 267
Score = 82.8 bits (203), Expect = 5e-16 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +2
Query: 23 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 202 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 249
Query: 203 DPWSKN 220 DP + N Sbjct: 250 DPVNNN 255
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