DK953567 |
Clone id |
TST39A01NGRL0018_B21 |
Library |
TST39 |
Length |
643 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_B21. 5' end sequence. |
Accession |
DK953567 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL255Contig1 |
Sequence |
TGGGCTTTTTGCGAATGAGAACTATGTGCAGCAGGCATATGGTAGGACAACATCTACGCC TCATGGGCTGTTCTTGGGAGGAGGAGGCAAGCTCCTAGCAGCTCAAATAATTGAGATTCT TGTGATTGCGGCATGGGTCTCAGTGACGATGGGGCCATTGTTTTTCATACTGCATAAGCT CAACCTGTTGCGGATCTCCGCCGAGGATGAGCTCTATGGGATGGATCTGACGCGACACGG TGGGGCTGCATATTACCACACTGAGGAAGACTCCCAGCATCCGCAATTGAAGACGGAGAT GACGCTGAGGGAGATGAATACGAAACCCGGGACTGACAAGAGGTCTGGGGTGGTGCACAC AGATGTGTAATGTCCTGCTTCACTTCATTTCTTCTCTGTGCTTTCCTTTTCTTGTATGAC GGCAAGATTTTTATGAAAGGTTTGGGAAATTAAATTAAAAGAGGTGACCCTAGGGTGGAG GAGAAAGACGTTTATGCTTCTTTGGACAAAGATGATGAAGAGGGGATCCTCTTTGCCATA GTTTGCTAGCTCATTCTATTGTACTACCCATGGGTCAAATGTAGGACCACTCTTTTTGTA AATTTACCATTCCGCCTCTAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P58905 |
Definition |
sp|P58905|AMT11_SOLLC Ammonium transporter 1 member 1 OS=Solanum lycopersicum |
Align length |
107 |
Score (bit) |
105.0 |
E-value |
2.0e-22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U5C0 |
Definition |
tr|A9U5C0|A9U5C0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
98 |
Score (bit) |
109.0 |
E-value |
1.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953567|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_B21, 5' (619 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U5C0|A9U5C0_PHYPA Predicted protein OS=Physcomitrella paten... 109 1e-22 tr|A9U3R5|A9U3R5_PHYPA Predicted protein OS=Physcomitrella paten... 108 3e-22 tr|Q5K411|Q5K411_9ROSI Ammonium transporter OS=Populus tremula x... 106 1e-21 tr|A9RX70|A9RX70_PHYPA Predicted protein OS=Physcomitrella paten... 106 1e-21 tr|Q68YC3|Q68YC3_CAMSI Putative ammonium transporter OS=Camellia... 105 2e-21 tr|A9RWL3|A9RWL3_PHYPA Predicted protein OS=Physcomitrella paten... 104 4e-21 tr|Q09J80|Q09J80_9ROSI Ammonium transporter OS=Citrus sinensis x... 102 1e-20 tr|A7PZ30|A7PZ30_VITVI Chromosome chr4 scaffold_39, whole genome... 102 2e-20 tr|A9RX71|A9RX71_PHYPA Predicted protein OS=Physcomitrella paten... 102 2e-20 tr|Q9FUH7|Q9FUH7_BRANA High-affinity ammonium transporter AMT1;2... 101 3e-20 tr|A9RX74|A9RX74_PHYPA Predicted protein OS=Physcomitrella paten... 101 3e-20 tr|Q9FVI4|Q9FVI4_LOTJA Putative ammonium transporter AMT1;1 OS=L... 101 4e-20 tr|Q9FSH3|Q9FSH3_LOTJA Ammonium transporter (AMT1.1) OS=Lotus ja... 101 4e-20 tr|B4FRK2|B4FRK2_MAIZE Putative uncharacterized protein OS=Zea m... 100 7e-20 tr|A7NXL9|A7NXL9_VITVI Chromosome chr5 scaffold_2, whole genome ... 100 1e-19 tr|A5B2L9|A5B2L9_VITVI Putative uncharacterized protein OS=Vitis... 100 1e-19 tr|Q6QU81|Q6QU81_WHEAT Ammonium transporter Amt1;1 OS=Triticum a... 97 8e-19 tr|Q6F5D8|Q6F5D8_CAMSI Putative ammonium transporter OS=Camellia... 97 8e-19 tr|B4F978|B4F978_MAIZE Putative uncharacterized protein OS=Zea m... 96 1e-18 tr|Q7Y1B9|Q7Y1B9_LOTJA Ammonium transporter OS=Lotus japonicus G... 95 3e-18 tr|Q70KK9|Q70KK9_LOTJA High affinity ammonium transporter OS=Lot... 94 5e-18 tr|B4FV06|B4FV06_MAIZE Putative uncharacterized protein OS=Zea m... 94 5e-18 tr|Q947N1|Q947N1_ORYSA Ammonium transporter 1-1 OS=Oryza sativa ... 94 6e-18 tr|Q7XQ12|Q7XQ12_ORYSJ Os04g0509600 protein OS=Oryza sativa subs... 94 6e-18 tr|Q56UT5|Q56UT5_ORYSJ Ammonium transporter OS=Oryza sativa subs... 94 6e-18 tr|Q01HF3|Q01HF3_ORYSA OSIGBa0157K09-H0214G12.4 protein OS=Oryza... 94 6e-18 tr|A2XVF3|A2XVF3_ORYSI Putative uncharacterized protein OS=Oryza... 94 6e-18 tr|Q947M9|Q947M9_ORYSA Ammonium transporter 1-3 OS=Oryza sativa ... 92 3e-17 tr|Q6K9G1|Q6K9G1_ORYSJ Os02g0620600 protein OS=Oryza sativa subs... 92 3e-17 tr|Q676V6|Q676V6_WHEAT Ammonium transporter OS=Triticum aestivum... 92 3e-17
>tr|A9U5C0|A9U5C0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_201250 PE=4 SV=1 Length = 495
Score = 109 bits (272), Expect = 1e-22 Identities = 53/98 (54%), Positives = 65/98 (66%) Frame = +2
Query: 2 GLFANENYVQQAYGRTTSTPHXXXXXXXXXXXAAQIIEILVIAAWVSVTMGPLFFILHKL 181 GLFA +NYV Q Y T +P+ AAQIIEI+ IAAWV+VTMGPLF+ LHK Sbjct: 384 GLFAEKNYVNQVYQTTFDSPYGLFMGGGGKLLAAQIIEIISIAAWVTVTMGPLFYGLHKF 443
Query: 182 NLLRISAEDELYGMDLTRHGGAAYYHTEEDSQHPQLKT 295 LLRI+ +DE+ GMD+TRHGG AY H + H Q+ T Sbjct: 444 RLLRITPQDEIAGMDVTRHGGTAYIHHDNSEHHLQMHT 481
>tr|A9U3R5|A9U3R5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_173509 PE=4 SV=1 Length = 505
Score = 108 bits (270), Expect = 3e-22 Identities = 53/98 (54%), Positives = 64/98 (65%) Frame = +2
Query: 2 GLFANENYVQQAYGRTTSTPHXXXXXXXXXXXAAQIIEILVIAAWVSVTMGPLFFILHKL 181 GLFA +NYV Q Y T P+ AAQIIEI+ IAAWV+VTMGPLF+ LHK Sbjct: 394 GLFAEKNYVNQVYQTTFDRPYGLFMGGGGKLLAAQIIEIISIAAWVTVTMGPLFYGLHKF 453
Query: 182 NLLRISAEDELYGMDLTRHGGAAYYHTEEDSQHPQLKT 295 LLRI+ +DE+ GMD+TRHGG AY H + H Q+ T Sbjct: 454 RLLRITPQDEIAGMDVTRHGGTAYIHHDNSEHHLQMHT 491
>tr|Q5K411|Q5K411_9ROSI Ammonium transporter OS=Populus tremula x Populus tremuloides GN=tAMT1.2 PE=2 SV=1 Length = 507
Score = 106 bits (265), Expect = 1e-21 Identities = 59/117 (50%), Positives = 67/117 (57%), Gaps = 2/117 (1%) Frame = +2
Query: 2 GLFANENYVQQAYGRTTSTPHXXXXXXXXXXXAAQIIEILVIAAWVSVTMGPLFFILHKL 181 GLFA + YV + Y P+ AAQIIEILVI WVS TMGPLF+ LHKL Sbjct: 388 GLFAKKAYVNEVYSNKPGRPYGLFMGGGGKLLAAQIIEILVIVGWVSATMGPLFYGLHKL 447
Query: 182 NLLRISAEDELYGMDLTRHGGAAYYHTEED--SQHPQLKTEMTLREMNTKPGTDKRS 346 LLRIS+EDE+ GMDLTRHGG AY + ED S P L NT P + S Sbjct: 448 KLLRISSEDEMAGMDLTRHGGFAYAYDAEDDVSGKPSFMMRKVLPANNTTPNENSPS 504
>tr|A9RX70|A9RX70_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_120482 PE=4 SV=1 Length = 503
Score = 106 bits (264), Expect = 1e-21 Identities = 51/92 (55%), Positives = 59/92 (64%) Frame = +2
Query: 2 GLFANENYVQQAYGRTTSTPHXXXXXXXXXXXAAQIIEILVIAAWVSVTMGPLFFILHKL 181 GLFA +NYVQQ YG P AAQI++IL I WV+VTMGPLF LH+ Sbjct: 394 GLFAEKNYVQQIYGGNADRPFGLFMGGGGRLLAAQIVQILAITGWVTVTMGPLFLALHRF 453
Query: 182 NLLRISAEDELYGMDLTRHGGAAYYHTEEDSQ 277 LLRIS+EDE+ GMDLTRHGG AY H + Q Sbjct: 454 RLLRISSEDEIAGMDLTRHGGTAYIHNDGSEQ 485
>tr|Q68YC3|Q68YC3_CAMSI Putative ammonium transporter OS=Camellia sinensis GN=CsAMT1;1 PE=2 SV=1 Length = 497
Score = 105 bits (262), Expect = 2e-21 Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 3/108 (2%) Frame = +2
Query: 5 LFANENYVQQAYGRTTSTPHXXXXXXXXXXXAAQIIEILVIAAWVSVTMGPLFFILHKLN 184 LFA+E YV + Y + P+ AA +I+I+VI WVSVTMGPLFF+LHKL Sbjct: 389 LFASEKYVNEVYPGKSDRPYGLLMGGGGRLLAAHVIQIVVIVGWVSVTMGPLFFVLHKLK 448
Query: 185 LLRISAEDELYGMDLTRHGGAAY---YHTEEDSQHPQLKTEMTLREMN 319 LLRISAEDE+ GMD+TRHGG AY YH E++S K M +R+++ Sbjct: 449 LLRISAEDEIAGMDMTRHGGFAYVYQYHDEDESN----KLGMQMRKID 492
>tr|A9RWL3|A9RWL3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_206280 PE=4 SV=1 Length = 511
Score = 104 bits (260), Expect = 4e-21 Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 1/111 (0%) Frame = +2
Query: 2 GLFANENYVQQAYGRTTSTPHXXXXXXXXXXXAAQIIEILVIAAWVSVTMGPLFFILHKL 181 GLFA +NY+ Q Y PH AAQIIEIL I WV+VTMGPLFF+L Sbjct: 394 GLFAQQNYILQIYDGAGDRPHGLFMGGGGKLLAAQIIEILAIFGWVTVTMGPLFFLLKLF 453
Query: 182 NLLRISAEDELYGMDLTRHGGAAYYHTEEDSQHPQLKTEMT-LREMNTKPG 331 NLLRIS EDE+ G+DLTRHGG AY H + S HP M + N PG Sbjct: 454 NLLRISPEDEMAGLDLTRHGGTAYIH-HDGSDHPMHMHSMNGQKRPNEGPG 503
>tr|Q09J80|Q09J80_9ROSI Ammonium transporter OS=Citrus sinensis x Poncirus trifoliata GN=amt1 PE=2 SV=2 Length = 502
Score = 102 bits (255), Expect = 1e-20 Identities = 51/92 (55%), Positives = 61/92 (66%), Gaps = 1/92 (1%) Frame = +2
Query: 5 LFANENYVQQAYGRTTSTPHXXXXXXXXXXXAAQIIEILVIAAWVSVTMGPLFFILHKLN 184 LFA E +V + Y P+ AA +I+ILV+A WVS TMGPLFF+LHKL Sbjct: 392 LFAKEKFVNEVYPGKPGRPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFVLHKLK 451
Query: 185 LLRISAEDELYGMDLTRHGGAAY-YHTEEDSQ 277 LLRIS EDE+ GMDLTRHGG AY YH ++D Q Sbjct: 452 LLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ 483
>tr|A7PZ30|A7PZ30_VITVI Chromosome chr4 scaffold_39, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026695001 PE=4 SV=1 Length = 324
Score = 102 bits (254), Expect = 2e-20 Identities = 47/90 (52%), Positives = 63/90 (70%) Frame = +2
Query: 2 GLFANENYVQQAYGRTTSTPHXXXXXXXXXXXAAQIIEILVIAAWVSVTMGPLFFILHKL 181 GLFA + YV++ Y + P+ AAQ I+I+V++ WV+VTMGPLF+ LHKL Sbjct: 179 GLFATKKYVREVYAGPSDRPYGLLMGGGGKLLAAQFIQIIVVSGWVTVTMGPLFYALHKL 238
Query: 182 NLLRISAEDELYGMDLTRHGGAAYYHTEED 271 LLRIS+EDE+ GMDLTRHGG AY + E++ Sbjct: 239 KLLRISSEDEMAGMDLTRHGGFAYVYNEDE 268
>tr|A9RX71|A9RX71_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_109662 PE=4 SV=1 Length = 504
Score = 102 bits (253), Expect = 2e-20 Identities = 53/93 (56%), Positives = 62/93 (66%) Frame = +2
Query: 2 GLFANENYVQQAYGRTTSTPHXXXXXXXXXXXAAQIIEILVIAAWVSVTMGPLFFILHKL 181 GLFA +NYVQQ YG S P AAQI++IL I WV+VTMGPLF LHK Sbjct: 394 GLFAEKNYVQQIYGGD-SRPFGLFMGGGGRLLAAQIVQILAITGWVTVTMGPLFLALHKF 452
Query: 182 NLLRISAEDELYGMDLTRHGGAAYYHTEEDSQH 280 LLRI+ EDE+ GMDLTRHGG AY H ++ S+H Sbjct: 453 RLLRITPEDEIAGMDLTRHGGTAYIH-QDGSEH 484
>tr|Q9FUH7|Q9FUH7_BRANA High-affinity ammonium transporter AMT1;2 OS=Brassica napus PE=2 SV=1 Length = 519
Score = 101 bits (252), Expect = 3e-20 Identities = 49/94 (52%), Positives = 60/94 (63%), Gaps = 1/94 (1%) Frame = +2
Query: 2 GLFANENYVQQAYGRTTSTPHXXXXXXXXXXXAAQIIEILVIAAWVSVTMGPLFFILHKL 181 GLFA E Y+ + YG T P+ AQ+++ILVI WVS TMG LFFIL +L Sbjct: 388 GLFAKEKYLNEVYGATPGRPYGLFMGGGGKLLGAQLVQILVIVGWVSATMGTLFFILKRL 447
Query: 182 NLLRISAEDELYGMDLTRHGGAAY-YHTEEDSQH 280 NLLRIS + E+ GMD+TRHGG AY YH +D H Sbjct: 448 NLLRISEQHEMQGMDMTRHGGFAYIYHDNDDESH 481
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