DK953569
Clone id TST39A01NGRL0018_B23
Library
Length 567
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_B23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GCAAAAGAGAGGTGTGCACTCTCTTCTTCAGCTAGCGGGAAGACTCGGAGGCAGGGCGCG
TGTTGAAAATGCGCCAGCACGATCACTGAATGGGCGATGGGCGATGCTCCCTCCCGTTCC
TGTTGTTCCTAAGAGCAATGGCTTACTTGTTTGCTTGGAGAAGCGCAAGCCACTGATTGC
CATAGCCTGGCTGAAGCAGTGCTGCCCGCTAATCTCTCAAAATGATGCCGAAACTCTGTT
CCGCACAGGCCAGGTGAAAATTCATTTGGGAGCCTCTGAAGCAAGCGACCCTGAAAAATT
TCAACTTAAGAAAATAACTAGGAGGAAGGTTCTTGCAGAAGGAACGATTCTCTGTTTGCC
AACTCGCTCTCTGCAGTTGGTGAATGAAAGCCGTGCAGCAACGAGACTAAACACCATATC
TGAGGTTGGTGAAACTATTTCAGAAAAGGACGAGGACTGAAGCATTGATGTTTTGCTCAG
TCAAAGTGCTGAATGCCCTAAAAAAGTGGGGGGTGAGTTGATTTCACGAGGGTACCACGG
TAGGTGGGAGCAGTTAAGTATGTTTGA
■■Homology search results ■■ -
sp_hit_id A6LPD5
Definition sp|A6LPD5|PROA_CLOB8 Gamma-glutamyl phosphate reductase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)
Align length 100
Score (bit) 33.1
E-value 0.98
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953569|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_B23, 5'
(567 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A6LPD5|PROA_CLOB8 Gamma-glutamyl phosphate reductase OS=Clost... 33 0.98

>sp|A6LPD5|PROA_CLOB8 Gamma-glutamyl phosphate reductase
OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB
8052) GN=proA PE=3 SV=1
Length = 414

Score = 33.1 bits (74), Expect = 0.98
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +2

Query: 131 KSNGLLVCLEKRKPLIAIAWLKQCCPLISQNDAETLFRTGQVKIHLGASEASDPEKFQLK 310
+ NGL + +KR PL I + + P ++ + A +TG I G SEA + K +K
Sbjct: 101 RPNGLQIG-QKRVPLGVIGIIYEARPNVTCDAAGLCIKTGNAVILRGGSEAINSNKAIVK 159

Query: 311 KITRRKVLAEGTILCLPTRSLQLVNES--RAATRLNTISE 424
+T + + G LP S+QLV ++ AT + ++E
Sbjct: 160 ALT-KGIERSG----LPKASVQLVEDTSREVATEMMRLNE 194


tr_hit_id B6U2M4
Definition tr|B6U2M4|B6U2M4_MAIZE RNA binding protein OS=Zea mays
Align length 65
Score (bit) 40.4
E-value 0.068
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953569|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_B23, 5'
(567 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6U2M4|B6U2M4_MAIZE RNA binding protein OS=Zea mays PE=2 SV=1 40 0.068
tr|Q69K07|Q69K07_ORYSJ Os09g0103500 protein OS=Oryza sativa subs... 40 0.089
tr|B8BCS6|B8BCS6_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.089
tr|A8MQT1|A8MQT1_HUMAN Putative uncharacterized protein CSAG4 (F... 35 2.9
tr|Q9LT72|Q9LT72_ARATH Similarity to unknown protein (At3g19440)... 34 6.4
tr|A3BVX6|A3BVX6_ORYSJ Putative uncharacterized protein OS=Oryza... 34 6.4

>tr|B6U2M4|B6U2M4_MAIZE RNA binding protein OS=Zea mays PE=2 SV=1
Length = 439

Score = 40.4 bits (93), Expect = 0.068
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +2

Query: 179 AIAWLKQCCPLISQNDAETLFRTGQVKIHLGASEASDPE----KFQLKKITRRKVLAEGT 346
AI W++ CCP + + + LFR +VK +L ++ S + + +L++++ + L G
Sbjct: 83 AIRWVRHCCPHVPASLVQKLFRLRKVKKNLVTADTSSTDSITLQLRLRRVSAKDELVPGD 142

Query: 347 ILCLP 361
IL LP
Sbjct: 143 ILFLP 147


>tr|Q69K07|Q69K07_ORYSJ Os09g0103500 protein OS=Oryza sativa subsp.
japonica GN=P0414D03.35 PE=4 SV=1
Length = 448

Score = 40.0 bits (92), Expect = 0.089
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +2

Query: 179 AIAWLKQCCPLISQNDAETLFRTGQVKIHLGASEAS----DPEKFQLKKITRRKVLAEGT 346
AI W+++CCP + + + LFR +VK ++ +E S E+ +L++++ + L G
Sbjct: 86 AIKWVRRCCPDLPTSLVQKLFRLRKVKKNVVTAEISSADASAEQHRLRRVSAKDQLMPGD 145

Query: 347 ILCLP 361
IL LP
Sbjct: 146 ILFLP 150


>tr|B8BCS6|B8BCS6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_30347 PE=4 SV=1
Length = 465

Score = 40.0 bits (92), Expect = 0.089
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +2

Query: 179 AIAWLKQCCPLISQNDAETLFRTGQVKIHLGASEAS----DPEKFQLKKITRRKVLAEGT 346
AI W+++CCP + + + LFR +VK ++ +E S E+ +L++++ + L G
Sbjct: 86 AIKWVRRCCPDLPTSLVQKLFRLRKVKKNVVTAEISSADASAEQHRLRRVSAKDQLMPGD 145

Query: 347 ILCLP 361
IL LP
Sbjct: 146 ILFLP 150


>tr|A8MQT1|A8MQT1_HUMAN Putative uncharacterized protein CSAG4
(Fragment) OS=Homo sapiens GN=CSAG4 PE=4 SV=1
Length = 114

Score = 35.0 bits (79), Expect = 2.9
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3

Query: 196 LQPGYGNQWLALLQANK*AIALRNNRNGREHRPSPIQ*SCWRIFNTRPASESSR 35
L+ G G + A + K +I +R++R R RP P S W N+R E+SR
Sbjct: 53 LRNGVGQHYPATPTSQKNSIKMRHSRTTRARRPPPSPVSLWAASNSRARPETSR 106


>tr|Q9LT72|Q9LT72_ARATH Similarity to unknown protein (At3g19440)
(Putative uncharacterized protein At3g19440)
OS=Arabidopsis thaliana GN=At3g19440 PE=2 SV=1
Length = 477

Score = 33.9 bits (76), Expect = 6.4
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Frame = +2

Query: 92 GRWAMLPPVPVVPKSNGLLVCLE------------KRKPLIAIAWLKQCCPLISQNDAET 235
G+W LPP P +G V + A+ W+ +C P + + +
Sbjct: 53 GKWLTLPPFS--PTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQK 110

Query: 236 LFRTGQVKIHLGAS-EASDPEKFQLKKITRRKVLAEGTILCLP 361
LFR QV+ + S + + ++ QLK++ ++ L G + LP
Sbjct: 111 LFRLRQVRREMSMSVDGDELQRSQLKRVAAKESLNVGDRIYLP 153


>tr|A3BVX6|A3BVX6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_027198 PE=4 SV=1
Length = 473

Score = 33.9 bits (76), Expect = 6.4
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Frame = +2

Query: 179 AIAWLKQCCPLISQNDAETLFRTGQVKIHLGASEAS----DPEKFQLK--------KITR 322
AI W+++CCP + + + LFR +VK ++ +E S E+ +L+ K++
Sbjct: 86 AIKWVRRCCPDLPTSLVQKLFRLRKVKKNVVTAEISSADASAEQHRLRRYVTYFCFKVSA 145

Query: 323 RKVLAEGTILCLP 361
+ L G IL LP
Sbjct: 146 KDQLMPGDILFLP 158