NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953575
Clone id TST39A01NGRL0018_C05
Library
Length 618
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_C05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGATGACGAGTCTTGAGGAGCCGTCGGTTGCAGCTTCGATAAAGCTTCTTGAGGAAGCT
GGTATAAACATGGAGCTTCTACAAAAATTGTCAGAGGAGGATTTGAAGGGCCTGTCTCCC
AATCCCCTCAAGCCTGTTGACCTCTTAAAGCTGAAATATGCTTTAAGAAGCTTTCATGCA
GATCAACAAGATAGAAACATCTACAAGAAAGCTTCCCAATATGTTGGAAAAGTTGAAGTG
GAGTTTCAAAACACTGAAGTGCAGCACGGAAACTGTGTGCTTGTTGGAAAAGAGGGATAC
GCGGTTACGGCCTTTCATGTGACCGAAGATCATGGAGCAGGAGAGAAGACAAAAAAGAGG
AAAAAGAATGCCAATGGATTACTTCGCATTAGGGTGGTTCTCCCCAACACAAATCACGGT
TGTGTGGAGTATGATGCGGAAATTTGTCACTCTTGGTCTCATGACGATTTAGCCCTGATC
AAAGCAGTGAATCCCCAGCAGACGCCAGTGCTTGAAAGCATCGAGGTTCTATCAAAGTGG
GAGCATTACTATCCAGAGGAAGGTGATAAGGTCGCGTTCTTATCCTTTCCACCAGGCAAG
GGTGAGGCACAACCCATA
■■Homology search results ■■ -
sp_hit_id Q6GGE0
Definition sp|Q6GGE0|Y1636_STAAR UPF0135 protein SAR1636 OS=Staphylococcus aureus (strain MRSA252)
Align length 177
Score (bit) 33.1
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953575|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_C05, 5'
         (618 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6GGE0|Y1636_STAAR UPF0135 protein SAR1636 OS=Staphylococcus ...    33   1.2  
sp|P43633|ALK1_YEAST Serine/threonine-protein kinase Haspin homo...    32   2.0  
sp|Q6ZRQ5|CF167_HUMAN Uncharacterized protein C6orf167 OS=Homo s...    32   3.5  

>sp|Q6GGE0|Y1636_STAAR UPF0135 protein SAR1636 OS=Staphylococcus
           aureus (strain MRSA252) GN=SAR1636 PE=3 SV=1
          Length = 366

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 8/177 (4%)
 Frame = +1

Query: 22  PSVAASIKLLEEAGINMELLQKLSEEDLK------GLSPNPLKPVDLLKLKYALRSFHAD 183
           P +   +  L+  G  + +++KL + D+        L  NP     +L     L++    
Sbjct: 66  PLIFKGVTSLKANGYGL-IIRKLIQHDINLIAMHTNLDVNPHGVNMMLAKAMGLKNISII 124

Query: 184 QQDRNIYKKASQYVGKVEV-EFQNTEVQHGNCVLVGKEGYAVTAFHVTEDHGAGEKTKKR 360
              +++Y K   Y+ K  V  F++   ++G    + +EG     F  +E  G  +   + 
Sbjct: 125 NNQQDVYYKVQTYIPKDNVGPFKDKLSENG----LAQEGNYEYCFFESEGRGQFKPVGEA 180

Query: 361 KKNANGLLRIRVVLPNTNHGCVEYDAEICH-SWSHDDLALIKAVNPQQTPVLESIEV 528
                 + +I  V    +   +E+  + C  SW+     LIK  +P +TPV + IE+
Sbjct: 181 NPTIGQIDKIEYV----DEVKIEFMIDACQKSWAEQ---LIKQYHPYETPVFDFIEI 230


>sp|P43633|ALK1_YEAST Serine/threonine-protein kinase Haspin homolog
           ALK1 OS=Saccharomyces cerevisiae GN=ALK1 PE=1 SV=2
          Length = 760

 Score = 32.3 bits (72), Expect = 2.0
 Identities = 18/83 (21%), Positives = 38/83 (45%)
 Frame = +1

Query: 115 SPNPLKPVDLLKLKYALRSFHADQQDRNIYKKASQYVGKVEVEFQNTEVQHGNCVLVGKE 294
           S  P++P +++K K +   FH      N Y ++S  +  +E+  +N        + V K+
Sbjct: 303 SMTPVEPRNMVKHKTSFSDFHKTIFSSNTYSESSDTISSMEITLKNKASSSSLSLNVLKK 362

Query: 295 GYAVTAFHVTEDHGAGEKTKKRK 363
             + ++      H + +K K+ K
Sbjct: 363 RNSQSSLKHKSSHASLQKFKRNK 385


>sp|Q6ZRQ5|CF167_HUMAN Uncharacterized protein C6orf167 OS=Homo
           sapiens GN=C6orf167 PE=1 SV=2
          Length = 1243

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 19/68 (27%), Positives = 35/68 (51%)
 Frame = +1

Query: 19  EPSVAASIKLLEEAGINMELLQKLSEEDLKGLSPNPLKPVDLLKLKYALRSFHADQQDRN 198
           EP++A    L E    N+     +S    KGL+     P+ +L++   +++   D+QD+ 
Sbjct: 417 EPNIAIVTILWEYYSKNLNSSFSISWLPFKGLANTMKSPLSMLEM---VKTCCCDKQDQE 473

Query: 199 IYKKASQY 222
           +YK +S Y
Sbjct: 474 LYKSSSSY 481
tr_hit_id A1CTG1
Definition tr|A1CTG1|A1CTG1_ASPCL Smr domain protein OS=Aspergillus clavatus
Align length 119
Score (bit) 39.3
E-value 0.19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953575|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_C05, 5'
         (618 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1CTG1|A1CTG1_ASPCL Smr domain protein OS=Aspergillus clavatu...    39   0.19 
tr|A7HLS4|A7HLS4_FERNB Protease Do OS=Fervidobacterium nodosum (...    37   0.72 
tr|B3N653|B3N653_DROER GG24178 OS=Drosophila erecta GN=GG24178 P...    35   3.5  
tr|Q4UDL9|Q4UDL9_THEAN 5'-3' exoribonuclease 2, putative OS=Thei...    35   3.6  
tr|Q4N5X7|Q4N5X7_THEPA Putative uncharacterized protein OS=Theil...    35   3.6  
tr|Q38XF0|Q38XF0_LACSS Hypothetical lipoprotein OS=Lactobacillus...    35   4.7  
tr|Q5NU36|Q5NU36_TRAOH MADS-box transcription factor OS=Tradesca...    35   4.7  
tr|Q82NU7|Q82NU7_STRAW Putative branched-chain amino acid ABC tr...    34   6.1  
tr|A5K0H7|A5K0H7_PLAVI 41K blood stage antigen 41-3, putative OS...    34   7.9  
tr|Q4WLW5|Q4WLW5_ASPFU Nonribosomal peptide synthase, putative O...    34   7.9  
tr|B0Y8P5|B0Y8P5_ASPFC Nonribosomal peptide synthase, putative O...    34   7.9  

>tr|A1CTG1|A1CTG1_ASPCL Smr domain protein OS=Aspergillus clavatus
           GN=ACLA_082900 PE=4 SV=1
          Length = 557

 Score = 39.3 bits (90), Expect = 0.19
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
 Frame = +1

Query: 79  LQKLSEEDLKGLSPNPLKPVDLLKLKYALRSFHADQQDRNIYKKASQYVGKVEVEFQNTE 258
           L   SEED  G        VD   +++ LR    D        +A   +  V    +   
Sbjct: 139 LSGASEEDKIGYLSEMFPSVDRFTIQHTLRKSDGDVD------RAMDVLLNVAFFDEQPT 192

Query: 259 VQHGNCVLV--GKEGYAVTAFHVTEDHGAGEKTKKRKKNANGLLRIRVVLPNTNHGCVE 429
           ++ G  V +  G +G+  +++   ED G  +  K++ KN NG   +  VLPN   GC E
Sbjct: 193 IEDGTKVAIPKGVDGFGESSY---EDPGRKKNRKRKGKNKNGSAGLSSVLPNNPSGCNE 248


>tr|A7HLS4|A7HLS4_FERNB Protease Do OS=Fervidobacterium nodosum
           (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1007
           PE=4 SV=1
          Length = 453

 Score = 37.4 bits (85), Expect = 0.72
 Identities = 31/108 (28%), Positives = 48/108 (44%)
 Frame = +1

Query: 193 RNIYKKASQYVGKVEVEFQNTEVQHGNCVLVGKEGYAVTAFHVTEDHGAGEKTKKRKKNA 372
           R  YK   Q+ G +  +F+ ++   G+  ++ KEGY VT +HV E               
Sbjct: 60  REFYK---QFFGDIPRQFEESD-SVGSGFIISKEGYIVTNYHVVE--------------- 100

Query: 373 NGLLRIRVVLPNTNHGCVEYDAEICHSWSHDDLALIKAVNPQQTPVLE 516
            G  +I V L N +     YDA+        D+A+IK    +  PV+E
Sbjct: 101 -GAKKITVTLLNGD----TYDAQYIGGDEELDIAVIKISPKKDLPVIE 143


>tr|B3N653|B3N653_DROER GG24178 OS=Drosophila erecta GN=GG24178 PE=4
           SV=1
          Length = 318

 Score = 35.0 bits (79), Expect = 3.5
 Identities = 23/71 (32%), Positives = 32/71 (45%)
 Frame = +2

Query: 185 NKIETSTRKLPNMLEKLKWSFKTLKCSTETVCLLEKRDTRLRPFM*PKIMEQERRQKRGK 364
           N  ETS    P    K     KT K  TE  CLLE +   +      K+  + RR++R +
Sbjct: 5   NATETSGAPSPPKSRKTCCVQKTAKTQTEKTCLLEMKGKLMEMLGKKKVSRRRRRRRRWR 64

Query: 365 RMPMDYFALGW 397
           R  +D  + GW
Sbjct: 65  RSCLDN-STGW 74


>tr|Q4UDL9|Q4UDL9_THEAN 5'-3' exoribonuclease 2, putative
           OS=Theileria annulata GN=TA11675 PE=4 SV=1
          Length = 1467

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -1

Query: 360 PLFCLLSCSMIFGHMKGRNRVSLFSNKHTVSVLHFSVLK 244
           P  CLL   ++FGHMK  +++ +  N +   +LH  +L+
Sbjct: 274 PYICLLREQVVFGHMKNSSKMRMMVNMNNYILLHIGILR 312


>tr|Q4N5X7|Q4N5X7_THEPA Putative uncharacterized protein
           OS=Theileria parva GN=TP02_0165 PE=4 SV=1
          Length = 1726

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -1

Query: 360 PLFCLLSCSMIFGHMKGRNRVSLFSNKHTVSVLHFSVLK 244
           P  CLL   ++FGHMK  +++ +  N ++  +LH  +L+
Sbjct: 346 PYICLLREQVVFGHMKNSSKLRMMVNMNSYILLHVGILR 384


>tr|Q38XF0|Q38XF0_LACSS Hypothetical lipoprotein OS=Lactobacillus
           sakei subsp. sakei (strain 23K) GN=LSA0827 PE=4 SV=1
          Length = 380

 Score = 34.7 bits (78), Expect = 4.7
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
 Frame = +1

Query: 316 HVTEDHGAGEKTKKRKKNANGLLRIRVVLPNT---NHGCVE---YDAE---ICHSWSHDD 468
           H TE H + E   + +   NG + I    PN+   N G V+   +D       H W   +
Sbjct: 265 HTTELHSSSEMNTEERGLVNGTIGINQTTPNSAKMNWGRVDPINFDGRGWLTVHGWYQTN 324

Query: 469 LALI------KAVNPQQTPVLESIEVLSK--WEHYYPEE 561
            A +      + +N +  PVL  +E  S+  + HYYP E
Sbjct: 325 GAGLLYGVKDRDINGKSMPVLSILETASRSSYGHYYPTE 363


>tr|Q5NU36|Q5NU36_TRAOH MADS-box transcription factor
           OS=Tradescantia ohiensis GN=TRGLOB PE=2 SV=1
          Length = 188

 Score = 34.7 bits (78), Expect = 4.7
 Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
 Frame = +1

Query: 28  VAASIKLLEEAGINMEL-LQKLSEEDLKGLSPNPLKPVDLLKLKYALRSFHADQQDRNIY 204
           ++A I L+++   NM++ L+ L+ EDL     N L+P DL+ ++ AL++ H   +++ + 
Sbjct: 87  LSAEIDLIKKENDNMQIELRHLNGEDL-----NSLQPKDLIPIEDALQNGHVKVREKQME 141

Query: 205 KKASQYVGKVEVEFQNTE----VQHGNCVLVGKEGYAVTAFH 318
                   + E+E ++ E    + H +  + GK G     +H
Sbjct: 142 IWRHHKKNEKELEDEHKELTYLLHHQHLAMTGKFGGLELGYH 183


>tr|Q82NU7|Q82NU7_STRAW Putative branched-chain amino acid ABC
           transporter ATP-binding protein OS=Streptomyces
           avermitilis GN=livF1 PE=3 SV=1
          Length = 230

 Score = 34.3 bits (77), Expect = 6.1
 Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
 Frame = +1

Query: 223 VGKVEVEFQNTEVQHGNCVLVGKEGYAVTAFHVTEDHGAGEKTKKRKKNANGLLRIRVVL 402
           +  V V +  + V HG CV V K+G A    H    +GAG+ T         LLR  V L
Sbjct: 4   IDDVHVGYHRSTVLHGVCVEVPKDGVAAVLGH----NGAGKST---------LLRAAVGL 50

Query: 403 PNTNHGCVEYDAE-ICHSWSHDDLALIKAVNPQ 498
                G V  D E I     H+ +A   A  PQ
Sbjct: 51  LTPARGAVRLDGEDITRRKPHERVARGMAYVPQ 83


>tr|A5K0H7|A5K0H7_PLAVI 41K blood stage antigen 41-3, putative
           OS=Plasmodium vivax GN=PVX_084420 PE=4 SV=1
          Length = 373

 Score = 33.9 bits (76), Expect = 7.9
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +1

Query: 22  PSVAASIKLLEEAGINME--LLQKLSEEDLKGLSPNPLKPVDLLK 150
           P VAA IKLLE A + +E  ++QKL +E  K LS   +K  D ++
Sbjct: 57  PQVAAEIKLLESARLKLEEGMMQKLEDEYNKSLSSAKIKIQDTVE 101


>tr|Q4WLW5|Q4WLW5_ASPFU Nonribosomal peptide synthase, putative
            OS=Aspergillus fumigatus GN=AFUA_6G12080 PE=3 SV=1
          Length = 3955

 Score = 33.9 bits (76), Expect = 7.9
 Identities = 22/78 (28%), Positives = 36/78 (46%)
 Frame = +1

Query: 43   KLLEEAGINMELLQKLSEEDLKGLSPNPLKPVDLLKLKYALRSFHADQQDRNIYKKASQY 222
            KL+ E  ++       +E  L+   PN + P   L L    R+ H+D+ DRN   KA   
Sbjct: 3342 KLIAEPSVDFMQSATTAETRLRQTVPNFMVPSMFLPLAQIPRT-HSDKVDRNSLLKAVAA 3400

Query: 223  VGKVEVEFQNTEVQHGNC 276
            +  +E++     V  G+C
Sbjct: 3401 MSSIELQAYKASVDAGHC 3418